RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
TRIM13-201ENST00000356017 RIMS2Q9UQ26 1411 aa22.55■■□□□ 1.2
TRIM13-201ENST00000356017 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
TRIM13-201ENST00000356017 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
TRIM13-201ENST00000356017 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
TRIM13-201ENST00000356017 LTKP29376 864 aa22.53■■□□□ 1.2
TRIM13-201ENST00000356017 SCAF11Q99590 1463 aaKnown RBP22.52■■□□□ 1.2
TRIM13-201ENST00000356017 MYO5BQ9ULV0 1848 aa22.52■■□□□ 1.2
TRIM13-201ENST00000356017 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
TRIM13-201ENST00000356017 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
TRIM13-201ENST00000356017 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
TRIM13-201ENST00000356017 STAC3Q96MF2 364 aa22.5■■□□□ 1.19
TRIM13-201ENST00000356017 NEXMIFQ5QGS0 1516 aa22.48■■□□□ 1.19
TRIM13-201ENST00000356017 MED14O60244 1454 aa22.48■■□□□ 1.19
TRIM13-201ENST00000356017 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
TRIM13-201ENST00000356017 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
TRIM13-201ENST00000356017 PLEKHG1Q9ULL1 1385 aa22.45■■□□□ 1.18
TRIM13-201ENST00000356017 NPHP4O75161 1426 aaPredicted RBP22.45■■□□□ 1.18
TRIM13-201ENST00000356017 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.18
TRIM13-201ENST00000356017 STRCQ7RTU9 1775 aa22.45■■□□□ 1.18
TRIM13-201ENST00000356017 BCANQ96GW7 911 aa22.44■■□□□ 1.18
TRIM13-201ENST00000356017 TONSLQ96HA7 1378 aa22.42■■□□□ 1.18
TRIM13-201ENST00000356017 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
TRIM13-201ENST00000356017 PPLO60437 1756 aa22.41■■□□□ 1.18
TRIM13-201ENST00000356017 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
TRIM13-201ENST00000356017 MYOM2P54296 1465 aa22.4■■□□□ 1.18
TRIM13-201ENST00000356017 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
TRIM13-201ENST00000356017 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.17
TRIM13-201ENST00000356017 IQGAP1P46940 1657 aa22.38■■□□□ 1.17
TRIM13-201ENST00000356017 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
TRIM13-201ENST00000356017 TBX22Q9Y458 520 aa22.36■■□□□ 1.17
TRIM13-201ENST00000356017 SLC26A8Q96RN1 970 aa22.35■■□□□ 1.17
TRIM13-201ENST00000356017 SETBP1Q9Y6X0 1596 aa22.35■■□□□ 1.17
TRIM13-201ENST00000356017 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
TRIM13-201ENST00000356017 PIK3C2GO75747 1445 aa22.34■■□□□ 1.17
TRIM13-201ENST00000356017 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
TRIM13-201ENST00000356017 ADAMTS13Q76LX8 1427 aa22.32■■□□□ 1.16
TRIM13-201ENST00000356017 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
TRIM13-201ENST00000356017 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
TRIM13-201ENST00000356017 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
TRIM13-201ENST00000356017 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
TRIM13-201ENST00000356017 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
TRIM13-201ENST00000356017 ALKQ9UM73 1620 aa22.27■■□□□ 1.16
TRIM13-201ENST00000356017 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
TRIM13-201ENST00000356017 LAMC1P11047 1609 aa22.24■■□□□ 1.15
TRIM13-201ENST00000356017 KCNA6P17658 529 aa22.24■■□□□ 1.15
TRIM13-201ENST00000356017 METP08581 1390 aa22.23■■□□□ 1.15
TRIM13-201ENST00000356017 ZNF335Q9H4Z2 1342 aaPredicted RBP22.22■■□□□ 1.15
TRIM13-201ENST00000356017 NBPF8Q3BBV2 869 aa22.19■■□□□ 1.14
TRIM13-201ENST00000356017 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
TRIM13-201ENST00000356017 SETD1AO15047 1707 aaKnown RBP22.18■■□□□ 1.14
TRIM13-201ENST00000356017 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
TRIM13-201ENST00000356017 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
TRIM13-201ENST00000356017 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
TRIM13-201ENST00000356017 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
TRIM13-201ENST00000356017 CPS1P31327 1500 aa22.15■■□□□ 1.14
TRIM13-201ENST00000356017 NWD1Q149M9 1564 aa22.14■■□□□ 1.14
TRIM13-201ENST00000356017 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.14
TRIM13-201ENST00000356017 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.14
TRIM13-201ENST00000356017 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
TRIM13-201ENST00000356017 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.13
TRIM13-201ENST00000356017 ABCC11Q96J66 1382 aa22.14■■□□□ 1.13
TRIM13-201ENST00000356017 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
TRIM13-201ENST00000356017 ADGRB1O14514 1584 aa22.14■■□□□ 1.13
TRIM13-201ENST00000356017 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
TRIM13-201ENST00000356017 STK26Q9P289 416 aa22.13■■□□□ 1.13
TRIM13-201ENST00000356017 TRPM1Q7Z4N2 1603 aa22.11■■□□□ 1.13
TRIM13-201ENST00000356017 LTBP4Q8N2S1 1624 aa22.11■■□□□ 1.13
TRIM13-201ENST00000356017 TECPR2O15040 1411 aa22.11■■□□□ 1.13
TRIM13-201ENST00000356017 RALGAPBQ86X10 1494 aa22.1■■□□□ 1.13
TRIM13-201ENST00000356017 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
TRIM13-201ENST00000356017 SIRT1Q96EB6 747 aa22.1■■□□□ 1.13
TRIM13-201ENST00000356017 XRN1Q8IZH2 1706 aaKnown RBP22.1■■□□□ 1.13
TRIM13-201ENST00000356017 PTCH1Q13635 1447 aa22.09■■□□□ 1.13
TRIM13-201ENST00000356017 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
TRIM13-201ENST00000356017 TRAK1Q9UPV9 953 aa22.08■■□□□ 1.13
TRIM13-201ENST00000356017 STRCP1A6NGW2 1772 aa22.08■■□□□ 1.12
TRIM13-201ENST00000356017 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
TRIM13-201ENST00000356017 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
TRIM13-201ENST00000356017 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
TRIM13-201ENST00000356017 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
TRIM13-201ENST00000356017 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
TRIM13-201ENST00000356017 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
TRIM13-201ENST00000356017 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
TRIM13-201ENST00000356017 TMEM94Q12767 1356 aa22.04■■□□□ 1.12
TRIM13-201ENST00000356017 KNDC1Q76NI1 1749 aa22.03■■□□□ 1.12
TRIM13-201ENST00000356017 POGKQ9P215 609 aa22.02■■□□□ 1.12
TRIM13-201ENST00000356017 CERKQ8TCT0 537 aa22.02■■□□□ 1.11
TRIM13-201ENST00000356017 PRAM1Q96QH2 718 aa22.02■■□□□ 1.11
TRIM13-201ENST00000356017 EIF3AQ14152 1382 aaKnown RBP22.01■■□□□ 1.11
TRIM13-201ENST00000356017 WAPLQ7Z5K2 1190 aa22.01■■□□□ 1.11
TRIM13-201ENST00000356017 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
TRIM13-201ENST00000356017 RBM33Q96EV2 1170 aaKnown RBP22■■□□□ 1.11
TRIM13-201ENST00000356017 IQSEC2Q5JU85 1478 aa21.99■■□□□ 1.11
TRIM13-201ENST00000356017 C19orf44Q9H6X5 657 aa21.98■■□□□ 1.11
TRIM13-201ENST00000356017 MSH6P52701 1360 aa21.96■■□□□ 1.11
TRIM13-201ENST00000356017 PLEKHH1Q9ULM0 1364 aa21.96■■□□□ 1.11
TRIM13-201ENST00000356017 CENPJQ9HC77 1338 aaPredicted RBP21.96■■□□□ 1.11
TRIM13-201ENST00000356017 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.1
TRIM13-201ENST00000356017 ADGRL3Q9HAR2 1447 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms