RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
FN1-204ENST00000356005 TXNDC2Q86VQ3 553 aa13.96□□□□□ -0.17
FN1-204ENST00000356005 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
FN1-204ENST00000356005 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.17
FN1-204ENST00000356005 IGF1RP08069 1367 aa13.96□□□□□ -0.17
FN1-204ENST00000356005 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.18
FN1-204ENST00000356005 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
FN1-204ENST00000356005 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
FN1-204ENST00000356005 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
FN1-204ENST00000356005 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
FN1-204ENST00000356005 MYBBP1AQ9BQG0 1328 aaKnown RBP13.95□□□□□ -0.18
FN1-204ENST00000356005 KIF16BQ96L93 1317 aa13.94□□□□□ -0.18
FN1-204ENST00000356005 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
FN1-204ENST00000356005 B4GALNT3Q6L9W6 998 aa13.94□□□□□ -0.18
FN1-204ENST00000356005 EPRSP07814 1512 aaKnown RBP13.93□□□□□ -0.18
FN1-204ENST00000356005 CPLX2Q6PUV4 134 aaKnown RBP13.93□□□□□ -0.18
FN1-204ENST00000356005 USP47Q96K76 1375 aa13.93□□□□□ -0.18
FN1-204ENST00000356005 PANK3Q9H999 370 aa13.93□□□□□ -0.18
FN1-204ENST00000356005 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
FN1-204ENST00000356005 SLC52A1Q9NWF4 448 aa13.92□□□□□ -0.18
FN1-204ENST00000356005 NESP48681 1621 aa13.92□□□□□ -0.18
FN1-204ENST00000356005 ST20-MTHFSA0A0A6YYL1 179 aa13.92□□□□□ -0.18
FN1-204ENST00000356005 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
FN1-204ENST00000356005 ABTB2Q8N961 1025 aa13.92□□□□□ -0.18
FN1-204ENST00000356005 ANKRD50Q9ULJ7 1429 aa13.91□□□□□ -0.18
FN1-204ENST00000356005 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
FN1-204ENST00000356005 ST18O60284 1047 aa13.91□□□□□ -0.18
FN1-204ENST00000356005 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
FN1-204ENST00000356005 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
FN1-204ENST00000356005 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
FN1-204ENST00000356005 FBXW7Q969H0 707 aa13.9□□□□□ -0.18
FN1-204ENST00000356005 E9PSI1 815 aa13.9□□□□□ -0.18
FN1-204ENST00000356005 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
FN1-204ENST00000356005 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
FN1-204ENST00000356005 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
FN1-204ENST00000356005 PRM3Q9NNZ6 103 aa13.89□□□□□ -0.19
FN1-204ENST00000356005 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
FN1-204ENST00000356005 LRRC9Q6ZRR7 1453 aa13.89□□□□□ -0.19
FN1-204ENST00000356005 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
FN1-204ENST00000356005 MAGI1Q96QZ7 1491 aaPredicted RBP13.89□□□□□ -0.19
FN1-204ENST00000356005 PHF14O94880 888 aa13.88□□□□□ -0.19
FN1-204ENST00000356005 EIF2S2P20042 333 aaKnown RBP13.88□□□□□ -0.19
FN1-204ENST00000356005 TRDNQ13061 729 aa13.87□□□□□ -0.19
FN1-204ENST00000356005 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
FN1-204ENST00000356005 NLRP6P59044 892 aa13.86□□□□□ -0.19
FN1-204ENST00000356005 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
FN1-204ENST00000356005 ERICH2A1L162 156 aa13.86□□□□□ -0.19
FN1-204ENST00000356005 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
FN1-204ENST00000356005 SF3A1Q15459 793 aaKnown RBP13.86□□□□□ -0.19
FN1-204ENST00000356005 TPM2P07951 284 aa13.86□□□□□ -0.19
FN1-204ENST00000356005 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
FN1-204ENST00000356005 G3BP1Q13283 466 aaKnown RBP eCLIP13.85□□□□□ -0.192e-53■□□□□ 8.6
FN1-204ENST00000356005 PLEKHO1Q53GL0 409 aaPredicted RBP13.85□□□□□ -0.19
FN1-204ENST00000356005 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
FN1-204ENST00000356005 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
FN1-204ENST00000356005 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
FN1-204ENST00000356005 H3BQV1 296 aa13.85□□□□□ -0.19
FN1-204ENST00000356005 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
FN1-204ENST00000356005 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
FN1-204ENST00000356005 TRIM29Q14134 588 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 RIC3Q7Z5B4 369 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 HFM1A2PYH4 1435 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 FAM184AQ8NB25 1140 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.84□□□□□ -0.19
FN1-204ENST00000356005 CTTNBP2Q8WZ74 1663 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 GAS2L2Q8NHY3 880 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 APPP05067 770 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
FN1-204ENST00000356005 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.19
FN1-204ENST00000356005 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.19
FN1-204ENST00000356005 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.19
FN1-204ENST00000356005 CCDC43Q96MW1 224 aaKnown RBP13.83□□□□□ -0.2
FN1-204ENST00000356005 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
FN1-204ENST00000356005 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
FN1-204ENST00000356005 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
FN1-204ENST00000356005 API5Q9BZZ5 524 aaKnown RBP13.83□□□□□ -0.2
FN1-204ENST00000356005 RAD21O60216 631 aa13.83□□□□□ -0.2
FN1-204ENST00000356005 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
FN1-204ENST00000356005 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
FN1-204ENST00000356005 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
FN1-204ENST00000356005 GNAI1P63096 354 aa13.82□□□□□ -0.2
FN1-204ENST00000356005 CCDC47Q96A33 483 aaKnown RBP13.82□□□□□ -0.2
FN1-204ENST00000356005 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
FN1-204ENST00000356005 NOP58Q9Y2X3 529 aaKnown RBP13.81□□□□□ -0.2
FN1-204ENST00000356005 RIPK4P57078 832 aa13.81□□□□□ -0.2
FN1-204ENST00000356005 PIP4K2BP78356 416 aa13.81□□□□□ -0.2
FN1-204ENST00000356005 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
FN1-204ENST00000356005 TROQ12816 1431 aaPredicted RBP13.81□□□□□ -0.2
FN1-204ENST00000356005 STRN4Q9NRL3 753 aa13.81□□□□□ -0.2
FN1-204ENST00000356005 RUNDC1Q96C34 613 aa13.8□□□□□ -0.2
FN1-204ENST00000356005 HOOK1Q9UJC3 728 aaKnown RBP13.8□□□□□ -0.2
FN1-204ENST00000356005 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
FN1-204ENST00000356005 AFAP1Q8N556 730 aa13.8□□□□□ -0.2
FN1-204ENST00000356005 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
FN1-204ENST00000356005 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
FN1-204ENST00000356005 ERC2O15083 957 aa13.79□□□□□ -0.2
FN1-204ENST00000356005 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
FN1-204ENST00000356005 SPG7Q9UQ90 795 aa13.79□□□□□ -0.2
FN1-204ENST00000356005 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms