RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 EXOC6Q8TAG9 804 aa13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 GEMIN8Q9NWZ8 242 aaKnown RBP13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 PCF11O94913 1555 aaKnown RBP13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 RAB3GAP2Q9H2M9 1393 aa13.66□□□□□ -0.22
PHACTR3-201ENST00000355648 HS1BP3Q53T59 392 aa13.66□□□□□ -0.22
PHACTR3-201ENST00000355648 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
PHACTR3-201ENST00000355648 CASKIN1Q8WXD9 1431 aa13.66□□□□□ -0.22
PHACTR3-201ENST00000355648 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
PHACTR3-201ENST00000355648 NUP160Q12769 1436 aa13.65□□□□□ -0.22
PHACTR3-201ENST00000355648 E9PSI1 815 aa13.65□□□□□ -0.22
PHACTR3-201ENST00000355648 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
PHACTR3-201ENST00000355648 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
PHACTR3-201ENST00000355648 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 MCM4P33991 863 aa13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 TSPYL1Q9H0U9 437 aa13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
PHACTR3-201ENST00000355648 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
PHACTR3-201ENST00000355648 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
PHACTR3-201ENST00000355648 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
PHACTR3-201ENST00000355648 NCOA2Q15596 1464 aa13.63□□□□□ -0.23
PHACTR3-201ENST00000355648 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
PHACTR3-201ENST00000355648 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
PHACTR3-201ENST00000355648 TRAK2O60296 914 aa13.62□□□□□ -0.23
PHACTR3-201ENST00000355648 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
PHACTR3-201ENST00000355648 DISP1Q96F81 1524 aa13.62□□□□□ -0.23
PHACTR3-201ENST00000355648 RALBP1Q15311 655 aa13.61□□□□□ -0.23
PHACTR3-201ENST00000355648 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
PHACTR3-201ENST00000355648 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
PHACTR3-201ENST00000355648 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
PHACTR3-201ENST00000355648 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
PHACTR3-201ENST00000355648 CCDC66A2RUB6 948 aa13.59□□□□□ -0.23
PHACTR3-201ENST00000355648 CBX1P83916 185 aa13.59□□□□□ -0.23
PHACTR3-201ENST00000355648 CCNB3Q8WWL7 1395 aa13.59□□□□□ -0.23
PHACTR3-201ENST00000355648 SOX12O15370 315 aa13.59□□□□□ -0.23
PHACTR3-201ENST00000355648 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
PHACTR3-201ENST00000355648 CHD1O14646 1710 aa13.58□□□□□ -0.24
PHACTR3-201ENST00000355648 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
PHACTR3-201ENST00000355648 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
PHACTR3-201ENST00000355648 KCNJ4P48050 445 aa13.58□□□□□ -0.24
PHACTR3-201ENST00000355648 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
PHACTR3-201ENST00000355648 PHF14O94880 888 aa13.58□□□□□ -0.24
PHACTR3-201ENST00000355648 CFAP43Q8NDM7 1665 aa13.57□□□□□ -0.24
PHACTR3-201ENST00000355648 SETD5Q9C0A6 1442 aa13.57□□□□□ -0.24
PHACTR3-201ENST00000355648 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
PHACTR3-201ENST00000355648 MCM5P33992 734 aa13.57□□□□□ -0.24
PHACTR3-201ENST00000355648 MCCP23508 829 aa13.56□□□□□ -0.24
PHACTR3-201ENST00000355648 NOL7Q9UMY1 257 aaKnown RBP13.56□□□□□ -0.24
PHACTR3-201ENST00000355648 TICAM2Q86XR7 235 aa13.56□□□□□ -0.24
PHACTR3-201ENST00000355648 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
PHACTR3-201ENST00000355648 SLKQ9H2G2 1235 aaPredicted RBP13.55□□□□□ -0.24
PHACTR3-201ENST00000355648 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
PHACTR3-201ENST00000355648 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
PHACTR3-201ENST00000355648 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
PHACTR3-201ENST00000355648 EFCC1Q9HA90 598 aa13.55□□□□□ -0.24
PHACTR3-201ENST00000355648 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
PHACTR3-201ENST00000355648 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
PHACTR3-201ENST00000355648 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
PHACTR3-201ENST00000355648 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
PHACTR3-201ENST00000355648 CEP120Q8N960 986 aa13.54□□□□□ -0.24
PHACTR3-201ENST00000355648 CARMIL2Q6F5E8 1435 aa13.53□□□□□ -0.24
PHACTR3-201ENST00000355648 TULP2O00295 520 aa13.53□□□□□ -0.24
PHACTR3-201ENST00000355648 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
PHACTR3-201ENST00000355648 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
PHACTR3-201ENST00000355648 TONSLQ96HA7 1378 aa13.52□□□□□ -0.24
PHACTR3-201ENST00000355648 GABPB1Q06547 395 aaPredicted RBP13.52□□□□□ -0.25
PHACTR3-201ENST00000355648 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
PHACTR3-201ENST00000355648 MYRIPQ8NFW9 859 aa13.52□□□□□ -0.25
PHACTR3-201ENST00000355648 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
PHACTR3-201ENST00000355648 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
PHACTR3-201ENST00000355648 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
PHACTR3-201ENST00000355648 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
PHACTR3-201ENST00000355648 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
PHACTR3-201ENST00000355648 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
PHACTR3-201ENST00000355648 ATP2B3Q16720 1220 aa13.5□□□□□ -0.25
PHACTR3-201ENST00000355648 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
PHACTR3-201ENST00000355648 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
PHACTR3-201ENST00000355648 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
PHACTR3-201ENST00000355648 GTF2F1P35269 517 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHACTR3-201ENST00000355648 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
PHACTR3-201ENST00000355648 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
PHACTR3-201ENST00000355648 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
PHACTR3-201ENST00000355648 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
PHACTR3-201ENST00000355648 CCDC18Q5T9S5 1454 aa13.49□□□□□ -0.25
PHACTR3-201ENST00000355648 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
PHACTR3-201ENST00000355648 FEZ1Q99689 392 aa13.48□□□□□ -0.25
PHACTR3-201ENST00000355648 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
PHACTR3-201ENST00000355648 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
PHACTR3-201ENST00000355648 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
PHACTR3-201ENST00000355648 CALCOCO1Q9P1Z2 691 aa13.48□□□□□ -0.25
PHACTR3-201ENST00000355648 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
PHACTR3-201ENST00000355648 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
PHACTR3-201ENST00000355648 RAD21O60216 631 aa13.47□□□□□ -0.25
PHACTR3-201ENST00000355648 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
PHACTR3-201ENST00000355648 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.25
PHACTR3-201ENST00000355648 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.25
PHACTR3-201ENST00000355648 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
PHACTR3-201ENST00000355648 USP19O94966 1318 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms