RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
EBF3-201ENST00000355311 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
EBF3-201ENST00000355311 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
EBF3-201ENST00000355311 PLCH2O75038 1416 aa18.12■□□□□ 0.49
EBF3-201ENST00000355311 NEFMP07197 916 aa18.12■□□□□ 0.49
EBF3-201ENST00000355311 PREX2Q70Z35 1606 aa18.11■□□□□ 0.49
EBF3-201ENST00000355311 POLR1AO95602 1720 aaPredicted RBP18.1■□□□□ 0.49
EBF3-201ENST00000355311 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
EBF3-201ENST00000355311 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
EBF3-201ENST00000355311 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
EBF3-201ENST00000355311 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
EBF3-201ENST00000355311 TRPM1Q7Z4N2 1603 aa18.07■□□□□ 0.48
EBF3-201ENST00000355311 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
EBF3-201ENST00000355311 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
EBF3-201ENST00000355311 CLUAP1Q96AJ1 413 aa18.05■□□□□ 0.48
EBF3-201ENST00000355311 NPM1P06748 294 aaKnown RBP eCLIP18.05■□□□□ 0.48
EBF3-201ENST00000355311 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
EBF3-201ENST00000355311 FBLN1P23142 703 aa18.04■□□□□ 0.48
EBF3-201ENST00000355311 ZCCHC11Q5TAX3 1644 aaKnown RBP18.04■□□□□ 0.48
EBF3-201ENST00000355311 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
EBF3-201ENST00000355311 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
EBF3-201ENST00000355311 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
EBF3-201ENST00000355311 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
EBF3-201ENST00000355311 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
EBF3-201ENST00000355311 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.47
EBF3-201ENST00000355311 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
EBF3-201ENST00000355311 DUOX2Q9NRD8 1548 aa18.01■□□□□ 0.47
EBF3-201ENST00000355311 KANK1Q14678 1352 aa18.01■□□□□ 0.47
EBF3-201ENST00000355311 FANCAO15360 1455 aa18■□□□□ 0.47
EBF3-201ENST00000355311 ATP10AO60312 1499 aa18■□□□□ 0.47
EBF3-201ENST00000355311 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
EBF3-201ENST00000355311 COG6Q9Y2V7 657 aa18■□□□□ 0.47
EBF3-201ENST00000355311 MYO5CQ9NQX4 1742 aa18■□□□□ 0.47
EBF3-201ENST00000355311 ARAP3Q8WWN8 1544 aa17.99■□□□□ 0.47
EBF3-201ENST00000355311 BACH2Q9BYV9 841 aa17.99■□□□□ 0.47
EBF3-201ENST00000355311 PPM1GO15355 546 aaPredicted RBP17.98■□□□□ 0.47
EBF3-201ENST00000355311 MLECQ14165 292 aa17.98■□□□□ 0.47
EBF3-201ENST00000355311 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
EBF3-201ENST00000355311 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
EBF3-201ENST00000355311 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
EBF3-201ENST00000355311 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
EBF3-201ENST00000355311 MTHFSP49914 203 aa17.96■□□□□ 0.47
EBF3-201ENST00000355311 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.46
EBF3-201ENST00000355311 SLFN5Q08AF3 891 aa17.95■□□□□ 0.46
EBF3-201ENST00000355311 NOS1P29475 1434 aa17.95■□□□□ 0.46
EBF3-201ENST00000355311 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
EBF3-201ENST00000355311 MAST1Q9Y2H9 1570 aa17.94■□□□□ 0.46
EBF3-201ENST00000355311 GGNBP2Q9H3C7 697 aa17.94■□□□□ 0.46
EBF3-201ENST00000355311 IGHDP01880 384 aa17.93■□□□□ 0.46
EBF3-201ENST00000355311 CENPJQ9HC77 1338 aaPredicted RBP17.93■□□□□ 0.46
EBF3-201ENST00000355311 E9PCH4 1651 aa17.92■□□□□ 0.46
EBF3-201ENST00000355311 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
EBF3-201ENST00000355311 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
EBF3-201ENST00000355311 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
EBF3-201ENST00000355311 SCAF11Q99590 1463 aaKnown RBP17.92■□□□□ 0.46
EBF3-201ENST00000355311 SRPK2P78362 688 aaKnown RBP17.92■□□□□ 0.46
EBF3-201ENST00000355311 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
EBF3-201ENST00000355311 IQGAP3Q86VI3 1631 aa17.91■□□□□ 0.46
EBF3-201ENST00000355311 UNC13BO14795 1591 aa17.91■□□□□ 0.46
EBF3-201ENST00000355311 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
EBF3-201ENST00000355311 ABCC1P33527 1531 aa17.91■□□□□ 0.46
EBF3-201ENST00000355311 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
EBF3-201ENST00000355311 FBXO31Q5XUX0 539 aaPredicted RBP17.9■□□□□ 0.46
EBF3-201ENST00000355311 CLTCL1P53675 1640 aa17.9■□□□□ 0.46
EBF3-201ENST00000355311 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.45
EBF3-201ENST00000355311 WWC1Q8IX03 1113 aa17.89■□□□□ 0.45
EBF3-201ENST00000355311 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
EBF3-201ENST00000355311 UBE2Q2Q8WVN8 375 aa17.88■□□□□ 0.45
EBF3-201ENST00000355311 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
EBF3-201ENST00000355311 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
EBF3-201ENST00000355311 IDI1Q13907 227 aa17.86■□□□□ 0.45
EBF3-201ENST00000355311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
EBF3-201ENST00000355311 STAG3Q9UJ98 1225 aa17.86■□□□□ 0.45
EBF3-201ENST00000355311 RLBP1P12271 317 aa17.85■□□□□ 0.45
EBF3-201ENST00000355311 SPRYD3Q8NCJ5 442 aa17.85■□□□□ 0.45
EBF3-201ENST00000355311 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
EBF3-201ENST00000355311 EIF3AQ14152 1382 aaKnown RBP17.85■□□□□ 0.45
EBF3-201ENST00000355311 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
EBF3-201ENST00000355311 ZNF521Q96K83 1311 aa17.84■□□□□ 0.45
EBF3-201ENST00000355311 ZFYVE16Q7Z3T8 1539 aa17.84■□□□□ 0.45
EBF3-201ENST00000355311 SEC24BO95487 1268 aa17.84■□□□□ 0.45
EBF3-201ENST00000355311 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
EBF3-201ENST00000355311 ATP7AQ04656 1500 aa17.83■□□□□ 0.45
EBF3-201ENST00000355311 NUTM2FA1L443 756 aa17.83■□□□□ 0.45
EBF3-201ENST00000355311 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
EBF3-201ENST00000355311 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
EBF3-201ENST00000355311 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
EBF3-201ENST00000355311 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
EBF3-201ENST00000355311 POGKQ9P215 609 aa17.82■□□□□ 0.44
EBF3-201ENST00000355311 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
EBF3-201ENST00000355311 E9PSI1 815 aa17.8■□□□□ 0.44
EBF3-201ENST00000355311 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
EBF3-201ENST00000355311 GSE1Q14687 1217 aa17.8■□□□□ 0.44
EBF3-201ENST00000355311 ARXQ96QS3 562 aa17.8■□□□□ 0.44
EBF3-201ENST00000355311 PTPRTO14522 1441 aa17.8■□□□□ 0.44
EBF3-201ENST00000355311 CD109Q6YHK3 1445 aa17.8■□□□□ 0.44
EBF3-201ENST00000355311 KDM2BQ8NHM5 1336 aa17.79■□□□□ 0.44
EBF3-201ENST00000355311 CENPQQ7L2Z9 268 aaPredicted RBP17.79■□□□□ 0.44
EBF3-201ENST00000355311 WAPLQ7Z5K2 1190 aa17.79■□□□□ 0.44
EBF3-201ENST00000355311 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms