RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ADGRL1O94910 1474 aa12.29□□□□□ -0.44
GABPA-201ENST00000354828 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
GABPA-201ENST00000354828 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
GABPA-201ENST00000354828 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
GABPA-201ENST00000354828 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.44
GABPA-201ENST00000354828 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
GABPA-201ENST00000354828 XPCQ01831 940 aaPredicted RBP12.27□□□□□ -0.45
GABPA-201ENST00000354828 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
GABPA-201ENST00000354828 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
GABPA-201ENST00000354828 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
GABPA-201ENST00000354828 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
GABPA-201ENST00000354828 DAPK1P53355 1430 aa12.26□□□□□ -0.45
GABPA-201ENST00000354828 HMMRO75330 724 aa12.26□□□□□ -0.45
GABPA-201ENST00000354828 KIAA1211Q6ZU35 1233 aa12.26□□□□□ -0.45
GABPA-201ENST00000354828 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
GABPA-201ENST00000354828 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
GABPA-201ENST00000354828 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
GABPA-201ENST00000354828 DENND4BO75064 1496 aaPredicted RBP12.25□□□□□ -0.45
GABPA-201ENST00000354828 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
GABPA-201ENST00000354828 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
GABPA-201ENST00000354828 HMOX1P09601 288 aa12.25□□□□□ -0.45
GABPA-201ENST00000354828 CCDC141Q6ZP82 1450 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 MCCP23508 829 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 KIF14Q15058 1648 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 ASXL2Q76L83 1435 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 FBXO31Q5XUX0 539 aaPredicted RBP12.24□□□□□ -0.45
GABPA-201ENST00000354828 PPP6R1Q9UPN7 881 aa12.24□□□□□ -0.45
GABPA-201ENST00000354828 NUP160Q12769 1436 aa12.23□□□□□ -0.45
GABPA-201ENST00000354828 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
GABPA-201ENST00000354828 ATP10BO94823 1461 aa12.23□□□□□ -0.45
GABPA-201ENST00000354828 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
GABPA-201ENST00000354828 FANCAO15360 1455 aa12.22□□□□□ -0.45
GABPA-201ENST00000354828 PDE3BQ13370 1112 aa12.22□□□□□ -0.45
GABPA-201ENST00000354828 DDRGK1Q96HY6 314 aa12.22□□□□□ -0.45
GABPA-201ENST00000354828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
GABPA-201ENST00000354828 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
GABPA-201ENST00000354828 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
GABPA-201ENST00000354828 RPGRIP1LQ68CZ1 1315 aa12.21□□□□□ -0.45
GABPA-201ENST00000354828 RIPK4P57078 832 aa12.21□□□□□ -0.45
GABPA-201ENST00000354828 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
GABPA-201ENST00000354828 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.45
GABPA-201ENST00000354828 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
GABPA-201ENST00000354828 ERBINQ96RT1 1412 aa12.21□□□□□ -0.45
GABPA-201ENST00000354828 UGGT2Q9NYU1 1516 aa12.21□□□□□ -0.46
GABPA-201ENST00000354828 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.46
GABPA-201ENST00000354828 DDX58O95786 925 aaKnown RBP12.2□□□□□ -0.46
GABPA-201ENST00000354828 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
GABPA-201ENST00000354828 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
GABPA-201ENST00000354828 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
GABPA-201ENST00000354828 RTEL1-TNFRSF6BF6WH68 1400 aa12.2□□□□□ -0.46
GABPA-201ENST00000354828 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
GABPA-201ENST00000354828 MAP3K1Q13233 1512 aa12.19□□□□□ -0.46
GABPA-201ENST00000354828 CAMSAP2Q08AD1 1489 aa12.19□□□□□ -0.46
GABPA-201ENST00000354828 TRIM6-TRIM34B2RNG4 842 aa12.19□□□□□ -0.46
GABPA-201ENST00000354828 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
GABPA-201ENST00000354828 NBPF1Q3BBV0 1214 aa12.19□□□□□ -0.46
GABPA-201ENST00000354828 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
GABPA-201ENST00000354828 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
GABPA-201ENST00000354828 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
GABPA-201ENST00000354828 APAF1O14727 1248 aa12.18□□□□□ -0.46
GABPA-201ENST00000354828 HSP90AB1P08238 724 aaKnown RBP12.18□□□□□ -0.46
GABPA-201ENST00000354828 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
GABPA-201ENST00000354828 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
GABPA-201ENST00000354828 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
GABPA-201ENST00000354828 TEX14Q8IWB6 1497 aa12.18□□□□□ -0.46
GABPA-201ENST00000354828 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
GABPA-201ENST00000354828 CLSTN1O94985 981 aa12.18□□□□□ -0.46
GABPA-201ENST00000354828 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
GABPA-201ENST00000354828 UBAP1LF5GYI3 381 aa12.17□□□□□ -0.46
GABPA-201ENST00000354828 NUP153P49790 1475 aaKnown RBP12.17□□□□□ -0.46
GABPA-201ENST00000354828 VPS37DQ86XT2 251 aa12.17□□□□□ -0.46
GABPA-201ENST00000354828 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
GABPA-201ENST00000354828 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
GABPA-201ENST00000354828 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
GABPA-201ENST00000354828 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
GABPA-201ENST00000354828 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 SLC12A5Q9H2X9 1139 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 ANKRD30BQ9BXX2 1392 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 ABCC5O15440 1437 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 FAM177BA6PVY3 158 aa12.16□□□□□ -0.46
GABPA-201ENST00000354828 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
GABPA-201ENST00000354828 THOC2Q8NI27 1593 aaKnown RBP12.15□□□□□ -0.46
GABPA-201ENST00000354828 NBR1Q14596 966 aa12.15□□□□□ -0.46
GABPA-201ENST00000354828 NOL10Q9BSC4 688 aaKnown RBP12.15□□□□□ -0.46
GABPA-201ENST00000354828 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
GABPA-201ENST00000354828 KIAA0556O60303 1618 aa12.15□□□□□ -0.46
GABPA-201ENST00000354828 WAPLQ7Z5K2 1190 aa12.15□□□□□ -0.47
GABPA-201ENST00000354828 PLCH2O75038 1416 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 IDI1Q13907 227 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 TOM1O60784 492 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 MTHFSP49914 203 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 RIC3Q7Z5B4 369 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 FOXO3O43524 673 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms