RNA–Protein interactions for RNA: ENST00000351079.8

COPE-203, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-203ENST00000351079 TMEM94Q12767 1356 aa28.33■■■□□ 2.13
COPE-203ENST00000351079 CHGAP10645 457 aaKnown RBP28.32■■■□□ 2.12
COPE-203ENST00000351079 HDGFP51858 240 aaKnown RBP28.32■■■□□ 2.12
COPE-203ENST00000351079 RIMS2Q9UQ26 1411 aa28.32■■■□□ 2.12
COPE-203ENST00000351079 ZFYVE9O95405 1425 aa28.3■■■□□ 2.12
COPE-203ENST00000351079 NUP155O75694 1391 aa28.3■■■□□ 2.12
COPE-203ENST00000351079 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
COPE-203ENST00000351079 NKTRP30414 1462 aaKnown RBP28.29■■■□□ 2.12
COPE-203ENST00000351079 PLEKHG1Q9ULL1 1385 aa28.29■■■□□ 2.12
COPE-203ENST00000351079 PROSER2Q86WR7 435 aaPredicted RBP28.29■■■□□ 2.12
COPE-203ENST00000351079 PHF23Q9BUL5 403 aaPredicted RBP28.27■■■□□ 2.12
COPE-203ENST00000351079 TMEM131LA2VDJ0 1609 aa28.26■■■□□ 2.11
COPE-203ENST00000351079 E9PCH4 1651 aa28.26■■■□□ 2.11
COPE-203ENST00000351079 NWD1Q149M9 1564 aa28.25■■■□□ 2.11
COPE-203ENST00000351079 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.25■■■□□ 2.11
COPE-203ENST00000351079 XIRP1Q702N8 1843 aaKnown RBP28.23■■■□□ 2.11
COPE-203ENST00000351079 RBM33Q96EV2 1170 aaKnown RBP28.23■■■□□ 2.11
COPE-203ENST00000351079 MSH6P52701 1360 aa28.2■■■□□ 2.1
COPE-203ENST00000351079 FAM135BQ49AJ0 1406 aa28.19■■■□□ 2.1
COPE-203ENST00000351079 MYO5BQ9ULV0 1848 aa28.18■■■□□ 2.1
COPE-203ENST00000351079 NUTM2DQ5VT03 806 aaPredicted RBP28.17■■■□□ 2.1
COPE-203ENST00000351079 TBX22Q9Y458 520 aa28.15■■■□□ 2.1
COPE-203ENST00000351079 RRBP1Q9P2E9 1410 aaKnown RBP28.14■■■□□ 2.1
COPE-203ENST00000351079 DIP2AQ14689 1571 aa28.12■■■□□ 2.09
COPE-203ENST00000351079 ADAMTS13Q76LX8 1427 aa28.1■■■□□ 2.09
COPE-203ENST00000351079 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
COPE-203ENST00000351079 ROBO1Q9Y6N7 1651 aa28.09■■■□□ 2.09
COPE-203ENST00000351079 PIK3R4Q99570 1358 aa28.08■■■□□ 2.09
COPE-203ENST00000351079 ZNF326Q5BKZ1 582 aaKnown RBP28.06■■■□□ 2.08
COPE-203ENST00000351079 CHD2O14647 1828 aaKnown RBP28.05■■■□□ 2.08
COPE-203ENST00000351079 TRPM2O94759 1503 aa28.05■■■□□ 2.08
COPE-203ENST00000351079 SLAIN2Q9P270 581 aa28.05■■■□□ 2.08
COPE-203ENST00000351079 SPHKAPQ2M3C7 1700 aa28.04■■■□□ 2.08
COPE-203ENST00000351079 NAIPQ13075 1403 aa28.04■■■□□ 2.08
COPE-203ENST00000351079 NCOA3Q9Y6Q9 1424 aa28.04■■■□□ 2.08
COPE-203ENST00000351079 ATF3P18847 181 aa27.97■■■□□ 2.07
COPE-203ENST00000351079 AMOTL2Q9Y2J4 779 aa27.97■■■□□ 2.07
COPE-203ENST00000351079 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
COPE-203ENST00000351079 CADPS2Q86UW7 1296 aa27.96■■■□□ 2.07
COPE-203ENST00000351079 TRIM52Q96A61 297 aa27.96■■■□□ 2.07
COPE-203ENST00000351079 SETBP1Q9Y6X0 1596 aa27.95■■■□□ 2.07
COPE-203ENST00000351079 C19orf44Q9H6X5 657 aa27.95■■■□□ 2.06
COPE-203ENST00000351079 CLTCL1P53675 1640 aa27.94■■■□□ 2.06
COPE-203ENST00000351079 PTPRUQ92729 1446 aa27.93■■■□□ 2.06
COPE-203ENST00000351079 PHLPP1O60346 1717 aa27.92■■■□□ 2.06
COPE-203ENST00000351079 JCADQ9P266 1359 aa27.91■■■□□ 2.06
COPE-203ENST00000351079 NRXN3Q9Y4C0 1643 aa27.9■■■□□ 2.06
COPE-203ENST00000351079 RGS17Q9UGC6 210 aaPredicted RBP27.89■■■□□ 2.06
COPE-203ENST00000351079 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
COPE-203ENST00000351079 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.87■■■□□ 2.05
COPE-203ENST00000351079 SLC4A1APQ9BWU0 796 aaKnown RBP27.87■■■□□ 2.05
COPE-203ENST00000351079 XRN1Q8IZH2 1706 aaKnown RBP27.87■■■□□ 2.05
COPE-203ENST00000351079 METP08581 1390 aa27.86■■■□□ 2.05
COPE-203ENST00000351079 DCCP43146 1447 aa27.86■■■□□ 2.05
COPE-203ENST00000351079 COL16A1Q07092 1604 aaPredicted RBP27.83■■■□□ 2.05
COPE-203ENST00000351079 AHDC1Q5TGY3 1603 aaPredicted RBP27.81■■■□□ 2.04
COPE-203ENST00000351079 KIF1BO60333 1816 aa27.8■■■□□ 2.04
COPE-203ENST00000351079 BRINP3Q76B58 766 aa27.79■■■□□ 2.04
COPE-203ENST00000351079 VGFO15240 615 aaPredicted RBP27.78■■■□□ 2.04
COPE-203ENST00000351079 SPATA31A6Q5VVP1 1343 aa27.77■■■□□ 2.04
COPE-203ENST00000351079 ADGRL3Q9HAR2 1447 aa27.76■■■□□ 2.04
COPE-203ENST00000351079 MEX3CQ5U5Q3 659 aaKnown RBP27.76■■■□□ 2.03
COPE-203ENST00000351079 POTEAQ6S8J7 498 aa27.76■■■□□ 2.03
COPE-203ENST00000351079 ASXL1Q8IXJ9 1541 aa27.75■■■□□ 2.03
COPE-203ENST00000351079 RPGRIP1LQ68CZ1 1315 aa27.74■■■□□ 2.03
COPE-203ENST00000351079 MST1RQ04912 1400 aa27.74■■■□□ 2.03
COPE-203ENST00000351079 PTCH1Q13635 1447 aa27.71■■■□□ 2.03
COPE-203ENST00000351079 FOXD1Q16676 465 aa27.7■■■□□ 2.02
COPE-203ENST00000351079 LRP6O75581 1613 aa27.7■■■□□ 2.02
COPE-203ENST00000351079 CCDC144AA2RUR9 1427 aa27.69■■■□□ 2.02
COPE-203ENST00000351079 SHPRHQ149N8 1683 aa27.67■■■□□ 2.02
COPE-203ENST00000351079 NALCNQ8IZF0 1738 aa27.66■■■□□ 2.02
COPE-203ENST00000351079 ROBO2Q9HCK4 1378 aa27.64■■■□□ 2.02
COPE-203ENST00000351079 NUTM2BA6NNL0 878 aaPredicted RBP27.63■■■□□ 2.01
COPE-203ENST00000351079 NUTM2EB1AL46 878 aaPredicted RBP27.63■■■□□ 2.01
COPE-203ENST00000351079 NUTM2AQ8IVF1 878 aaPredicted RBP27.63■■■□□ 2.01
COPE-203ENST00000351079 SETD5Q9C0A6 1442 aa27.63■■■□□ 2.01
COPE-203ENST00000351079 ZNF772Q68DY9 489 aaPredicted RBP27.62■■■□□ 2.01
COPE-203ENST00000351079 MPHOSPH9Q99550 1183 aa27.62■■■□□ 2.01
COPE-203ENST00000351079 SETD1AO15047 1707 aaKnown RBP27.61■■■□□ 2.01
COPE-203ENST00000351079 PRAG1Q86YV5 1406 aa27.61■■■□□ 2.01
COPE-203ENST00000351079 PPLO60437 1756 aa27.6■■■□□ 2.01
COPE-203ENST00000351079 C1orf167Q5SNV9 1468 aa27.6■■■□□ 2.01
COPE-203ENST00000351079 LRRC59Q96AG4 307 aaKnown RBP27.6■■■□□ 2.01
COPE-203ENST00000351079 NHSL1Q5SYE7 1610 aa27.59■■■□□ 2.01
COPE-203ENST00000351079 RGL3Q3MIN7 710 aa27.59■■■□□ 2.01
COPE-203ENST00000351079 DDX17Q92841 729 aaKnown RBP27.58■■■□□ 2.01
COPE-203ENST00000351079 ANKRD30BQ9BXX2 1392 aa27.56■■■□□ 2
COPE-203ENST00000351079 SPATA31E1Q6ZUB1 1445 aa27.56■■■□□ 2
COPE-203ENST00000351079 ADGRF5Q8IZF2 1346 aa27.55■■■□□ 2
COPE-203ENST00000351079 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
COPE-203ENST00000351079 PNPLA6Q8IY17 1366 aa27.52■■■□□ 2
COPE-203ENST00000351079 ORAI2Q96SN7 254 aa27.49■■□□□ 1.99
COPE-203ENST00000351079 STK26Q9P289 416 aa27.49■■□□□ 1.99
COPE-203ENST00000351079 AFF2P51816 1311 aa27.48■■□□□ 1.99
COPE-203ENST00000351079 CDC42BPGQ6DT37 1551 aa27.47■■□□□ 1.99
COPE-203ENST00000351079 C8orf37Q96NL8 207 aa27.46■■□□□ 1.99
COPE-203ENST00000351079 PIK3C2GO75747 1445 aa27.46■■□□□ 1.99
COPE-203ENST00000351079 LRPPRCP42704 1394 aaKnown RBP27.46■■□□□ 1.99
COPE-203ENST00000351079 TECPR2O15040 1411 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms