RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C20orf194Q5TEA3 1177 aa24.32■■□□□ 1.48
SCARF1-202ENST00000348987 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
SCARF1-202ENST00000348987 TMF1P82094 1093 aa24.3■■□□□ 1.48
SCARF1-202ENST00000348987 C8orf34Q49A92 452 aa24.3■■□□□ 1.48
SCARF1-202ENST00000348987 FAM161AQ3B820 660 aa24.29■■□□□ 1.48
SCARF1-202ENST00000348987 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
SCARF1-202ENST00000348987 ATP10AO60312 1499 aa24.29■■□□□ 1.48
SCARF1-202ENST00000348987 MAGI2Q86UL8 1455 aa24.29■■□□□ 1.48
SCARF1-202ENST00000348987 ABCC1P33527 1531 aa24.25■■□□□ 1.47
SCARF1-202ENST00000348987 CENPQQ7L2Z9 268 aaPredicted RBP24.23■■□□□ 1.47
SCARF1-202ENST00000348987 LAMC1P11047 1609 aa24.23■■□□□ 1.47
SCARF1-202ENST00000348987 EIF2AK4Q9P2K8 1649 aaKnown RBP24.2■■□□□ 1.47
SCARF1-202ENST00000348987 RGS3P49796 1198 aa24.2■■□□□ 1.46
SCARF1-202ENST00000348987 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.46
SCARF1-202ENST00000348987 WDR7Q9Y4E6 1490 aa24.2■■□□□ 1.46
SCARF1-202ENST00000348987 POGKQ9P215 609 aa24.19■■□□□ 1.46
SCARF1-202ENST00000348987 KIF3BO15066 747 aa24.18■■□□□ 1.46
SCARF1-202ENST00000348987 RRAGDQ9NQL2 400 aaPredicted RBP24.17■■□□□ 1.46
SCARF1-202ENST00000348987 BLMP54132 1417 aaPredicted RBP24.17■■□□□ 1.46
SCARF1-202ENST00000348987 SCAPERQ9BY12 1400 aa24.17■■□□□ 1.46
SCARF1-202ENST00000348987 FANCAO15360 1455 aa24.15■■□□□ 1.46
SCARF1-202ENST00000348987 RNF17Q9BXT8 1623 aaKnown RBP24.15■■□□□ 1.46
SCARF1-202ENST00000348987 KNSTRNQ9Y448 316 aa24.14■■□□□ 1.45
SCARF1-202ENST00000348987 AMER1Q5JTC6 1135 aaPredicted RBP24.13■■□□□ 1.45
SCARF1-202ENST00000348987 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
SCARF1-202ENST00000348987 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
SCARF1-202ENST00000348987 PKNOX2Q96KN3 472 aa24.13■■□□□ 1.45
SCARF1-202ENST00000348987 MADDQ8WXG6 1647 aa24.12■■□□□ 1.45
SCARF1-202ENST00000348987 OSCARQ8IYS5 282 aa24.11■■□□□ 1.45
SCARF1-202ENST00000348987 ZFYVE16Q7Z3T8 1539 aa24.1■■□□□ 1.45
SCARF1-202ENST00000348987 TRPM2O94759 1503 aa24.08■■□□□ 1.44
SCARF1-202ENST00000348987 PTPRTO14522 1441 aa24.08■■□□□ 1.44
SCARF1-202ENST00000348987 PLEKHH1Q9ULM0 1364 aa24.07■■□□□ 1.44
SCARF1-202ENST00000348987 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
SCARF1-202ENST00000348987 CLTCL1P53675 1640 aa24.07■■□□□ 1.44
SCARF1-202ENST00000348987 RTEL1-TNFRSF6BF6WH68 1400 aa24.05■■□□□ 1.44
SCARF1-202ENST00000348987 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
SCARF1-202ENST00000348987 IQGAP1P46940 1657 aa24.05■■□□□ 1.44
SCARF1-202ENST00000348987 CFAP70Q5T0N1 1121 aa24.04■■□□□ 1.44
SCARF1-202ENST00000348987 SLKQ9H2G2 1235 aaPredicted RBP24.04■■□□□ 1.44
SCARF1-202ENST00000348987 INSRP06213 1382 aa24.04■■□□□ 1.44
SCARF1-202ENST00000348987 NPM1P06748 294 aaKnown RBP eCLIP24.04■■□□□ 1.44
SCARF1-202ENST00000348987 WDR43Q15061 677 aaKnown RBP eCLIP24.03■■□□□ 1.44
SCARF1-202ENST00000348987 ZMYM4Q5VZL5 1548 aa24.03■■□□□ 1.44
SCARF1-202ENST00000348987 USP19O94966 1318 aa24.03■■□□□ 1.44
SCARF1-202ENST00000348987 DUSP27Q5VZP5 1158 aa24.03■■□□□ 1.44
SCARF1-202ENST00000348987 ARXQ96QS3 562 aa24.03■■□□□ 1.44
SCARF1-202ENST00000348987 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
SCARF1-202ENST00000348987 UGGT1Q9NYU2 1555 aa24.02■■□□□ 1.44
SCARF1-202ENST00000348987 ATP7AQ04656 1500 aa24.02■■□□□ 1.44
SCARF1-202ENST00000348987 ARAP3Q8WWN8 1544 aa24.01■■□□□ 1.43
SCARF1-202ENST00000348987 L1TD1Q5T7N2 865 aaKnown RBP24.01■■□□□ 1.43
SCARF1-202ENST00000348987 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
SCARF1-202ENST00000348987 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
SCARF1-202ENST00000348987 GLIPR1L2Q4G1C9 344 aa24■■□□□ 1.43
SCARF1-202ENST00000348987 CCDC146Q8IYE0 955 aa24■■□□□ 1.43
SCARF1-202ENST00000348987 CDCA8Q53HL2 280 aa23.99■■□□□ 1.43
SCARF1-202ENST00000348987 SEC24BO95487 1268 aa23.98■■□□□ 1.43
SCARF1-202ENST00000348987 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.98■■□□□ 1.43
SCARF1-202ENST00000348987 CEP152O94986 1710 aa23.98■■□□□ 1.43
SCARF1-202ENST00000348987 NAP1L5Q96NT1 182 aaPredicted RBP23.97■■□□□ 1.43
SCARF1-202ENST00000348987 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
SCARF1-202ENST00000348987 ZNF521Q96K83 1311 aa23.96■■□□□ 1.43
SCARF1-202ENST00000348987 KANK1Q14678 1352 aa23.96■■□□□ 1.43
SCARF1-202ENST00000348987 GGT6Q6P531 493 aa23.96■■□□□ 1.43
SCARF1-202ENST00000348987 VSIG10Q8N0Z9 540 aa23.96■■□□□ 1.43
SCARF1-202ENST00000348987 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
SCARF1-202ENST00000348987 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.43
SCARF1-202ENST00000348987 CHGAP10645 457 aaKnown RBP23.95■■□□□ 1.42
SCARF1-202ENST00000348987 SYNMO15061 1565 aa23.95■■□□□ 1.42
SCARF1-202ENST00000348987 BECN1Q14457 450 aa23.94■■□□□ 1.42
SCARF1-202ENST00000348987 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
SCARF1-202ENST00000348987 SPINK5Q9NQ38 1064 aaPredicted RBP23.94■■□□□ 1.42
SCARF1-202ENST00000348987 TET3O43151 1660 aa23.94■■□□□ 1.42
SCARF1-202ENST00000348987 STAC3Q96MF2 364 aa23.94■■□□□ 1.42
SCARF1-202ENST00000348987 CARD14Q9BXL6 1004 aa23.94■■□□□ 1.42
SCARF1-202ENST00000348987 XRCC6P12956 609 aaKnown RBP eCLIP23.93■■□□□ 1.42
SCARF1-202ENST00000348987 IGHDP01880 384 aa23.92■■□□□ 1.42
SCARF1-202ENST00000348987 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
SCARF1-202ENST00000348987 ZMYND15Q9H091 742 aa23.92■■□□□ 1.42
SCARF1-202ENST00000348987 MYOM1P52179 1685 aa23.92■■□□□ 1.42
SCARF1-202ENST00000348987 VWDEQ8N2E2 1590 aa23.92■■□□□ 1.42
SCARF1-202ENST00000348987 RAPGEF3O95398 923 aa23.91■■□□□ 1.42
SCARF1-202ENST00000348987 PNNQ9H307 717 aaKnown RBP23.91■■□□□ 1.42
SCARF1-202ENST00000348987 APAF1O14727 1248 aa23.91■■□□□ 1.42
SCARF1-202ENST00000348987 EIF3AQ14152 1382 aaKnown RBP23.91■■□□□ 1.42
SCARF1-202ENST00000348987 PIK3C2GO75747 1445 aa23.89■■□□□ 1.42
SCARF1-202ENST00000348987 ANTXR1Q9H6X2 564 aa23.89■■□□□ 1.42
SCARF1-202ENST00000348987 ERVK-7P63135 1459 aa23.89■■□□□ 1.41
SCARF1-202ENST00000348987 CD109Q6YHK3 1445 aa23.88■■□□□ 1.41
SCARF1-202ENST00000348987 MROH1Q8NDA8 1641 aa23.88■■□□□ 1.41
SCARF1-202ENST00000348987 PANK2Q9BZ23 570 aa23.88■■□□□ 1.41
SCARF1-202ENST00000348987 HSP90AA2PQ14568 343 aaPredicted RBP23.88■■□□□ 1.41
SCARF1-202ENST00000348987 CFAP65Q6ZU64 1925 aaKnown RBP23.88■■□□□ 1.41
SCARF1-202ENST00000348987 GOLGA6L3A6NEY3 463 aa23.87■■□□□ 1.41
SCARF1-202ENST00000348987 SLFN5Q08AF3 891 aa23.87■■□□□ 1.41
SCARF1-202ENST00000348987 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
SCARF1-202ENST00000348987 BCAR3O75815 825 aa23.86■■□□□ 1.41
SCARF1-202ENST00000348987 CLCN1P35523 988 aa23.86■■□□□ 1.41
SCARF1-202ENST00000348987 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms