RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
CDK5RAP1-202ENST00000346416 NOS1P29475 1434 aa19.32■□□□□ 0.68
CDK5RAP1-202ENST00000346416 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
CDK5RAP1-202ENST00000346416 CFAP70Q5T0N1 1121 aa19.31■□□□□ 0.68
CDK5RAP1-202ENST00000346416 ZC3H13Q5T200 1668 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP1-202ENST00000346416 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
CDK5RAP1-202ENST00000346416 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
CDK5RAP1-202ENST00000346416 SYNMO15061 1565 aa19.27■□□□□ 0.68
CDK5RAP1-202ENST00000346416 EIF3AQ14152 1382 aaKnown RBP19.27■□□□□ 0.67
CDK5RAP1-202ENST00000346416 KTN1Q86UP2 1357 aaKnown RBP19.27■□□□□ 0.67
CDK5RAP1-202ENST00000346416 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP1-202ENST00000346416 PIK3C2BO00750 1634 aa19.26■□□□□ 0.67
CDK5RAP1-202ENST00000346416 KIF13AQ9H1H9 1805 aa19.26■□□□□ 0.67
CDK5RAP1-202ENST00000346416 PPLO60437 1756 aa19.26■□□□□ 0.67
CDK5RAP1-202ENST00000346416 RALBP1Q15311 655 aa19.25■□□□□ 0.67
CDK5RAP1-202ENST00000346416 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
CDK5RAP1-202ENST00000346416 SUPT16HQ9Y5B9 1047 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP1-202ENST00000346416 PANK3Q9H999 370 aa19.23■□□□□ 0.67
CDK5RAP1-202ENST00000346416 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP1-202ENST00000346416 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
CDK5RAP1-202ENST00000346416 PIK3C2GO75747 1445 aa19.22■□□□□ 0.67
CDK5RAP1-202ENST00000346416 CDCA8Q53HL2 280 aa19.21■□□□□ 0.67
CDK5RAP1-202ENST00000346416 IDI1Q13907 227 aa19.21■□□□□ 0.67
CDK5RAP1-202ENST00000346416 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
CDK5RAP1-202ENST00000346416 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
CDK5RAP1-202ENST00000346416 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
CDK5RAP1-202ENST00000346416 AGLP35573 1532 aa19.19■□□□□ 0.66
CDK5RAP1-202ENST00000346416 SETBP1Q9Y6X0 1596 aa19.19■□□□□ 0.66
CDK5RAP1-202ENST00000346416 C14orf93Q9H972 538 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP1-202ENST00000346416 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
CDK5RAP1-202ENST00000346416 BRD4O60885 1362 aaPredicted RBP19.18■□□□□ 0.66
CDK5RAP1-202ENST00000346416 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP1-202ENST00000346416 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
CDK5RAP1-202ENST00000346416 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
CDK5RAP1-202ENST00000346416 NEXMIFQ5QGS0 1516 aa19.16■□□□□ 0.66
CDK5RAP1-202ENST00000346416 VGFO15240 615 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP1-202ENST00000346416 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
CDK5RAP1-202ENST00000346416 CC2D1BQ5T0F9 858 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP1-202ENST00000346416 NUTM2DQ5VT03 806 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP1-202ENST00000346416 FBXO31Q5XUX0 539 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP1-202ENST00000346416 ADGRB1O14514 1584 aa19.14■□□□□ 0.65
CDK5RAP1-202ENST00000346416 NLRP13Q86W25 1043 aa19.14■□□□□ 0.65
CDK5RAP1-202ENST00000346416 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
CDK5RAP1-202ENST00000346416 ERVK-7P63135 1459 aa19.13■□□□□ 0.65
CDK5RAP1-202ENST00000346416 KDM5AP29375 1690 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP1-202ENST00000346416 ARHGEF40Q8TER5 1519 aa19.12■□□□□ 0.65
CDK5RAP1-202ENST00000346416 FKBP8Q14318 412 aa19.12■□□□□ 0.65
CDK5RAP1-202ENST00000346416 TMEM132EQ6IEE7 984 aa19.12■□□□□ 0.65
CDK5RAP1-202ENST00000346416 TRAK1Q9UPV9 953 aa19.12■□□□□ 0.65
CDK5RAP1-202ENST00000346416 SBNO2Q9Y2G9 1366 aa19.12■□□□□ 0.65
CDK5RAP1-202ENST00000346416 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
CDK5RAP1-202ENST00000346416 CENPJQ9HC77 1338 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP1-202ENST00000346416 MYOM1P52179 1685 aa19.11■□□□□ 0.65
CDK5RAP1-202ENST00000346416 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
CDK5RAP1-202ENST00000346416 CLTCQ00610 1675 aaKnown RBP19.1■□□□□ 0.65
CDK5RAP1-202ENST00000346416 NEFLP07196 543 aa19.1■□□□□ 0.65
CDK5RAP1-202ENST00000346416 KNSTRNQ9Y448 316 aa19.1■□□□□ 0.65
CDK5RAP1-202ENST00000346416 MLECQ14165 292 aa19.1■□□□□ 0.65
CDK5RAP1-202ENST00000346416 LRPPRCP42704 1394 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP1-202ENST00000346416 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
CDK5RAP1-202ENST00000346416 AMER1Q5JTC6 1135 aaPredicted RBP19.06■□□□□ 0.64
CDK5RAP1-202ENST00000346416 QRICH2Q9H0J4 1663 aa19.05■□□□□ 0.64
CDK5RAP1-202ENST00000346416 ASXL1Q8IXJ9 1541 aa19.03■□□□□ 0.64
CDK5RAP1-202ENST00000346416 STAG3Q9UJ98 1225 aa19.03■□□□□ 0.64
CDK5RAP1-202ENST00000346416 SPATA31D1Q6ZQQ2 1576 aa19.03■□□□□ 0.64
CDK5RAP1-202ENST00000346416 BCANQ96GW7 911 aa19.01■□□□□ 0.63
CDK5RAP1-202ENST00000346416 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP1-202ENST00000346416 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
CDK5RAP1-202ENST00000346416 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
CDK5RAP1-202ENST00000346416 SENP3-EIF4A1A0A087X0R7 540 aa19■□□□□ 0.63
CDK5RAP1-202ENST00000346416 ESF1Q9H501 851 aaKnown RBP19■□□□□ 0.63
CDK5RAP1-202ENST00000346416 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
CDK5RAP1-202ENST00000346416 CARD14Q9BXL6 1004 aa18.98■□□□□ 0.63
CDK5RAP1-202ENST00000346416 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
CDK5RAP1-202ENST00000346416 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
CDK5RAP1-202ENST00000346416 SMG6Q86US8 1419 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP1-202ENST00000346416 STK26Q9P289 416 aa18.96■□□□□ 0.63
CDK5RAP1-202ENST00000346416 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
CDK5RAP1-202ENST00000346416 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
CDK5RAP1-202ENST00000346416 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
CDK5RAP1-202ENST00000346416 ALKQ9UM73 1620 aa18.93■□□□□ 0.62
CDK5RAP1-202ENST00000346416 SAFB2Q14151 953 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDK5RAP1-202ENST00000346416 INSRP06213 1382 aa18.92■□□□□ 0.62
CDK5RAP1-202ENST00000346416 TULP4Q9NRJ4 1543 aa18.92■□□□□ 0.62
CDK5RAP1-202ENST00000346416 YTHDC2Q9H6S0 1430 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP1-202ENST00000346416 IRX6P78412 446 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP1-202ENST00000346416 PUS7Q96PZ0 661 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP1-202ENST00000346416 RIMS2Q9UQ26 1411 aa18.91■□□□□ 0.62
CDK5RAP1-202ENST00000346416 PTPRMP28827 1452 aa18.9■□□□□ 0.62
CDK5RAP1-202ENST00000346416 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP1-202ENST00000346416 NSD3Q9BZ95 1437 aa18.89■□□□□ 0.61
CDK5RAP1-202ENST00000346416 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
CDK5RAP1-202ENST00000346416 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
CDK5RAP1-202ENST00000346416 ADAMTS8Q9UP79 889 aa18.88■□□□□ 0.61
CDK5RAP1-202ENST00000346416 SALL2Q9Y467 1007 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP1-202ENST00000346416 POGKQ9P215 609 aa18.87■□□□□ 0.61
CDK5RAP1-202ENST00000346416 TNRQ92752 1358 aa18.87■□□□□ 0.61
CDK5RAP1-202ENST00000346416 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
CDK5RAP1-202ENST00000346416 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP1-202ENST00000346416 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms