RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 HSPA1LP34931 641 aa26.79■■□□□ 1.88
CKLF-202ENST00000345436 PROSER2Q86WR7 435 aaPredicted RBP26.79■■□□□ 1.88
CKLF-202ENST00000345436 PLEKHG1Q9ULL1 1385 aa26.78■■□□□ 1.88
CKLF-202ENST00000345436 TBX22Q9Y458 520 aa26.76■■□□□ 1.87
CKLF-202ENST00000345436 E9PCH4 1651 aa26.75■■□□□ 1.87
CKLF-202ENST00000345436 ZFYVE9O95405 1425 aa26.74■■□□□ 1.87
CKLF-202ENST00000345436 TRIM52Q96A61 297 aa26.74■■□□□ 1.87
CKLF-202ENST00000345436 TMEM131LA2VDJ0 1609 aa26.73■■□□□ 1.87
CKLF-202ENST00000345436 STRCP1A6NGW2 1772 aa26.73■■□□□ 1.87
CKLF-202ENST00000345436 NAIPQ13075 1403 aa26.72■■□□□ 1.87
CKLF-202ENST00000345436 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
CKLF-202ENST00000345436 ZNF326Q5BKZ1 582 aaKnown RBP26.7■■□□□ 1.86
CKLF-202ENST00000345436 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
CKLF-202ENST00000345436 HFM1A2PYH4 1435 aa26.67■■□□□ 1.86
CKLF-202ENST00000345436 NKTRP30414 1462 aaKnown RBP26.67■■□□□ 1.86
CKLF-202ENST00000345436 NUTM2DQ5VT03 806 aaPredicted RBP26.66■■□□□ 1.86
CKLF-202ENST00000345436 MSH6P52701 1360 aa26.64■■□□□ 1.86
CKLF-202ENST00000345436 PIK3R4Q99570 1358 aa26.64■■□□□ 1.86
CKLF-202ENST00000345436 ACIN1Q9UKV3 1341 aaKnown RBP26.64■■□□□ 1.85
CKLF-202ENST00000345436 SLC4A1APQ9BWU0 796 aaKnown RBP26.63■■□□□ 1.85
CKLF-202ENST00000345436 C14orf37Q86TY3 774 aa26.61■■□□□ 1.85
CKLF-202ENST00000345436 MYO5BQ9ULV0 1848 aa26.6■■□□□ 1.85
CKLF-202ENST00000345436 FAM135BQ49AJ0 1406 aa26.6■■□□□ 1.85
CKLF-202ENST00000345436 NCOA3Q9Y6Q9 1424 aa26.59■■□□□ 1.85
CKLF-202ENST00000345436 ALKQ9UM73 1620 aa26.59■■□□□ 1.85
CKLF-202ENST00000345436 RBM33Q96EV2 1170 aaKnown RBP26.59■■□□□ 1.85
CKLF-202ENST00000345436 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
CKLF-202ENST00000345436 NWD1Q149M9 1564 aa26.58■■□□□ 1.85
CKLF-202ENST00000345436 SPHKAPQ2M3C7 1700 aa26.56■■□□□ 1.84
CKLF-202ENST00000345436 ILDR2Q71H61 639 aa26.55■■□□□ 1.84
CKLF-202ENST00000345436 SLAIN2Q9P270 581 aa26.55■■□□□ 1.84
CKLF-202ENST00000345436 ADAMTS13Q76LX8 1427 aa26.55■■□□□ 1.84
CKLF-202ENST00000345436 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
CKLF-202ENST00000345436 AMOTL2Q9Y2J4 779 aa26.54■■□□□ 1.84
CKLF-202ENST00000345436 VGFO15240 615 aaPredicted RBP26.53■■□□□ 1.84
CKLF-202ENST00000345436 TRPM2O94759 1503 aa26.52■■□□□ 1.84
CKLF-202ENST00000345436 ATF3P18847 181 aa26.52■■□□□ 1.84
CKLF-202ENST00000345436 CADPS2Q86UW7 1296 aa26.52■■□□□ 1.84
CKLF-202ENST00000345436 C19orf44Q9H6X5 657 aa26.52■■□□□ 1.84
CKLF-202ENST00000345436 CHD2O14647 1828 aaKnown RBP26.51■■□□□ 1.83
CKLF-202ENST00000345436 XIRP1Q702N8 1843 aaKnown RBP26.51■■□□□ 1.83
CKLF-202ENST00000345436 RPGRIP1LQ68CZ1 1315 aa26.5■■□□□ 1.83
CKLF-202ENST00000345436 SOCS7O14512 581 aa26.5■■□□□ 1.83
CKLF-202ENST00000345436 MED1Q15648 1581 aaPredicted RBP26.44■■□□□ 1.82
CKLF-202ENST00000345436 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
CKLF-202ENST00000345436 MPHOSPH9Q99550 1183 aa26.43■■□□□ 1.82
CKLF-202ENST00000345436 SETBP1Q9Y6X0 1596 aa26.42■■□□□ 1.82
CKLF-202ENST00000345436 KIF1BO60333 1816 aa26.42■■□□□ 1.82
CKLF-202ENST00000345436 CCDC144AA2RUR9 1427 aa26.38■■□□□ 1.81
CKLF-202ENST00000345436 METP08581 1390 aa26.37■■□□□ 1.81
CKLF-202ENST00000345436 NEXMIFQ5QGS0 1516 aa26.37■■□□□ 1.81
CKLF-202ENST00000345436 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
CKLF-202ENST00000345436 ROBO1Q9Y6N7 1651 aa26.37■■□□□ 1.81
CKLF-202ENST00000345436 FOXD1Q16676 465 aa26.36■■□□□ 1.81
CKLF-202ENST00000345436 SETD5Q9C0A6 1442 aa26.35■■□□□ 1.81
CKLF-202ENST00000345436 DCCP43146 1447 aa26.32■■□□□ 1.8
CKLF-202ENST00000345436 RGL3Q3MIN7 710 aa26.31■■□□□ 1.8
CKLF-202ENST00000345436 JCADQ9P266 1359 aa26.31■■□□□ 1.8
CKLF-202ENST00000345436 NRXN3Q9Y4C0 1643 aa26.3■■□□□ 1.8
CKLF-202ENST00000345436 ANKRD30BQ9BXX2 1392 aa26.28■■□□□ 1.8
CKLF-202ENST00000345436 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.28■■□□□ 1.8
CKLF-202ENST00000345436 XRN1Q8IZH2 1706 aaKnown RBP26.25■■□□□ 1.79
CKLF-202ENST00000345436 BRINP3Q76B58 766 aa26.24■■□□□ 1.79
CKLF-202ENST00000345436 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
CKLF-202ENST00000345436 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
CKLF-202ENST00000345436 SPATA31A6Q5VVP1 1343 aa26.21■■□□□ 1.79
CKLF-202ENST00000345436 PTCH1Q13635 1447 aa26.21■■□□□ 1.79
CKLF-202ENST00000345436 RAB3GAP2Q9H2M9 1393 aa26.2■■□□□ 1.78
CKLF-202ENST00000345436 HRCP23327 699 aa26.19■■□□□ 1.78
CKLF-202ENST00000345436 SPATA31E1Q6ZUB1 1445 aa26.19■■□□□ 1.78
CKLF-202ENST00000345436 ADGRF5Q8IZF2 1346 aa26.18■■□□□ 1.78
CKLF-202ENST00000345436 MEX3CQ5U5Q3 659 aaKnown RBP26.17■■□□□ 1.78
CKLF-202ENST00000345436 MST1RQ04912 1400 aa26.16■■□□□ 1.78
CKLF-202ENST00000345436 LRRC59Q96AG4 307 aaKnown RBP26.16■■□□□ 1.78
CKLF-202ENST00000345436 PPLO60437 1756 aa26.15■■□□□ 1.78
CKLF-202ENST00000345436 AHDC1Q5TGY3 1603 aaPredicted RBP26.15■■□□□ 1.78
CKLF-202ENST00000345436 ROBO2Q9HCK4 1378 aa26.15■■□□□ 1.78
CKLF-202ENST00000345436 PRAG1Q86YV5 1406 aa26.14■■□□□ 1.78
CKLF-202ENST00000345436 RGS17Q9UGC6 210 aaPredicted RBP26.13■■□□□ 1.77
CKLF-202ENST00000345436 STK26Q9P289 416 aa26.12■■□□□ 1.77
CKLF-202ENST00000345436 COL16A1Q07092 1604 aaPredicted RBP26.11■■□□□ 1.77
CKLF-202ENST00000345436 ASXL1Q8IXJ9 1541 aa26.1■■□□□ 1.77
CKLF-202ENST00000345436 LRPPRCP42704 1394 aaKnown RBP26.08■■□□□ 1.77
CKLF-202ENST00000345436 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
CKLF-202ENST00000345436 C1orf167Q5SNV9 1468 aa26.07■■□□□ 1.76
CKLF-202ENST00000345436 ZNF772Q68DY9 489 aaPredicted RBP26.07■■□□□ 1.76
CKLF-202ENST00000345436 STAC3Q96MF2 364 aa26.06■■□□□ 1.76
CKLF-202ENST00000345436 C14orf93Q9H972 538 aaKnown RBP26.06■■□□□ 1.76
CKLF-202ENST00000345436 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
CKLF-202ENST00000345436 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
CKLF-202ENST00000345436 SIRT1Q96EB6 747 aa26.05■■□□□ 1.76
CKLF-202ENST00000345436 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
CKLF-202ENST00000345436 PIK3C2GO75747 1445 aa26.05■■□□□ 1.76
CKLF-202ENST00000345436 NUTM2BA6NNL0 878 aaPredicted RBP26.04■■□□□ 1.76
CKLF-202ENST00000345436 NUTM2EB1AL46 878 aaPredicted RBP26.04■■□□□ 1.76
CKLF-202ENST00000345436 POTEAQ6S8J7 498 aa26.04■■□□□ 1.76
CKLF-202ENST00000345436 NUTM2AQ8IVF1 878 aaPredicted RBP26.04■■□□□ 1.76
CKLF-202ENST00000345436 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
CKLF-202ENST00000345436 TECPR2O15040 1411 aa26.02■■□□□ 1.76
CKLF-202ENST00000345436 ESCO1Q5FWF5 840 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms