RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MBD3O95983 291 aa14.74□□□□□ -0.05
COL12A1-202ENST00000345356 CALRP27797 417 aaKnown RBP14.74□□□□□ -0.05
COL12A1-202ENST00000345356 FAM184AQ8NB25 1140 aa14.74□□□□□ -0.05
COL12A1-202ENST00000345356 SASS6Q6UVJ0 657 aa14.74□□□□□ -0.05
COL12A1-202ENST00000345356 CCDC70Q6NSX1 233 aa14.73□□□□□ -0.05
COL12A1-202ENST00000345356 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
COL12A1-202ENST00000345356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.73□□□□□ -0.05
COL12A1-202ENST00000345356 ELL2O00472 640 aaPredicted RBP14.73□□□□□ -0.05
COL12A1-202ENST00000345356 HSP90B2PQ58FF3 399 aa14.73□□□□□ -0.05
COL12A1-202ENST00000345356 TAF3Q5VWG9 929 aa14.73□□□□□ -0.05
COL12A1-202ENST00000345356 ANKRD30AQ9BXX3 1397 aa14.73□□□□□ -0.05
COL12A1-202ENST00000345356 INTS3Q68E01 1043 aaKnown RBP14.73□□□□□ -0.05
COL12A1-202ENST00000345356 AAMPQ13685 434 aa14.72□□□□□ -0.05
COL12A1-202ENST00000345356 MPNDQ8N594 471 aa14.72□□□□□ -0.05
COL12A1-202ENST00000345356 VPS37CA5D8V6 355 aaPredicted RBP14.72□□□□□ -0.05
COL12A1-202ENST00000345356 KANK1Q14678 1352 aa14.71□□□□□ -0.05
COL12A1-202ENST00000345356 EIF4G1Q04637 1599 aaKnown RBP14.71□□□□□ -0.06
COL12A1-202ENST00000345356 BRD4O60885 1362 aaPredicted RBP14.71□□□□□ -0.06
COL12A1-202ENST00000345356 ACBD3Q9H3P7 528 aa14.71□□□□□ -0.06
COL12A1-202ENST00000345356 TPM1P09493 284 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 ANO2Q9NQ90 1003 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 STK26Q9P289 416 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 PDZRN3Q9UPQ7 1066 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 SMC3Q9UQE7 1217 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
COL12A1-202ENST00000345356 NGEFQ8N5V2 710 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 ZHX1Q9UKY1 873 aaPredicted RBP14.7□□□□□ -0.06
COL12A1-202ENST00000345356 NPHP1O15259 732 aa14.7□□□□□ -0.06
COL12A1-202ENST00000345356 CBX1P83916 185 aa14.69□□□□□ -0.06
COL12A1-202ENST00000345356 TSR1Q2NL82 804 aaKnown RBP14.69□□□□□ -0.06
COL12A1-202ENST00000345356 TRIM5Q9C035 493 aa14.69□□□□□ -0.06
COL12A1-202ENST00000345356 RUSC2Q8N2Y8 1516 aa14.69□□□□□ -0.06
COL12A1-202ENST00000345356 CDC45O75419 566 aa14.69□□□□□ -0.06
COL12A1-202ENST00000345356 PDCL2Q8N4E4 241 aa14.69□□□□□ -0.06
COL12A1-202ENST00000345356 FBXW7Q969H0 707 aa14.69□□□□□ -0.06
COL12A1-202ENST00000345356 LMOD3Q0VAK6 560 aa14.68□□□□□ -0.06
COL12A1-202ENST00000345356 SPC24Q8NBT2 197 aa14.68□□□□□ -0.06
COL12A1-202ENST00000345356 SPAG9O60271 1321 aaKnown RBP14.68□□□□□ -0.06
COL12A1-202ENST00000345356 LETM1O95202 739 aaPredicted RBP14.68□□□□□ -0.06
COL12A1-202ENST00000345356 ERICH4A6NGS2 130 aa14.67□□□□□ -0.06
COL12A1-202ENST00000345356 H0YHG0 523 aa14.67□□□□□ -0.06
COL12A1-202ENST00000345356 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
COL12A1-202ENST00000345356 LEKR1Q6ZMV7 388 aa14.67□□□□□ -0.06
COL12A1-202ENST00000345356 RASSF8Q8NHQ8 419 aa14.67□□□□□ -0.06
COL12A1-202ENST00000345356 CCDC112Q8NEF3 446 aa14.67□□□□□ -0.06
COL12A1-202ENST00000345356 GORABQ5T7V8 394 aa14.66□□□□□ -0.06
COL12A1-202ENST00000345356 FHOD3Q2V2M9 1422 aa14.65□□□□□ -0.06
COL12A1-202ENST00000345356 CLSTN1O94985 981 aa14.65□□□□□ -0.06
COL12A1-202ENST00000345356 PDE4CQ08493 712 aa14.65□□□□□ -0.06
COL12A1-202ENST00000345356 AK7Q96M32 723 aa14.65□□□□□ -0.06
COL12A1-202ENST00000345356 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
COL12A1-202ENST00000345356 ZKSCAN1P17029 563 aaPredicted RBP14.65□□□□□ -0.06
COL12A1-202ENST00000345356 ADAMTS8Q9UP79 889 aa14.65□□□□□ -0.06
COL12A1-202ENST00000345356 RUFY1Q96T51 708 aa14.64□□□□□ -0.07
COL12A1-202ENST00000345356 LMOD2Q6P5Q4 547 aa14.64□□□□□ -0.07
COL12A1-202ENST00000345356 CGNQ9P2M7 1197 aaKnown RBP14.63□□□□□ -0.07
COL12A1-202ENST00000345356 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
COL12A1-202ENST00000345356 RABEP1Q15276 862 aa14.63□□□□□ -0.07
COL12A1-202ENST00000345356 XPCQ01831 940 aaPredicted RBP14.63□□□□□ -0.07
COL12A1-202ENST00000345356 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
COL12A1-202ENST00000345356 K7ELQ4 463 aaPredicted RBP14.62□□□□□ -0.07
COL12A1-202ENST00000345356 CIZ1Q9ULV3 898 aaPredicted RBP14.62□□□□□ -0.07
COL12A1-202ENST00000345356 RUFY2Q8WXA3 655 aa14.62□□□□□ -0.07
COL12A1-202ENST00000345356 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
COL12A1-202ENST00000345356 IPO7O95373 1038 aaKnown RBP14.61□□□□□ -0.07
COL12A1-202ENST00000345356 CCDC27Q2M243 656 aa14.61□□□□□ -0.07
COL12A1-202ENST00000345356 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
COL12A1-202ENST00000345356 RUNDC1Q96C34 613 aa14.61□□□□□ -0.07
COL12A1-202ENST00000345356 SKAP1Q86WV1 359 aa14.61□□□□□ -0.07
COL12A1-202ENST00000345356 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
COL12A1-202ENST00000345356 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
COL12A1-202ENST00000345356 AEBP1Q8IUX7 1158 aa14.6□□□□□ -0.07
COL12A1-202ENST00000345356 API5Q9BZZ5 524 aaKnown RBP14.6□□□□□ -0.07
COL12A1-202ENST00000345356 UACAQ9BZF9 1416 aa14.6□□□□□ -0.07
COL12A1-202ENST00000345356 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
COL12A1-202ENST00000345356 CLCN1P35523 988 aa14.6□□□□□ -0.07
COL12A1-202ENST00000345356 NEK4P51957 841 aa14.59□□□□□ -0.07
COL12A1-202ENST00000345356 CHMP4AQ9BY43 222 aa14.59□□□□□ -0.07
COL12A1-202ENST00000345356 NAT10Q9H0A0 1025 aaKnown RBP14.59□□□□□ -0.07
COL12A1-202ENST00000345356 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
COL12A1-202ENST00000345356 BCAR3O75815 825 aa14.59□□□□□ -0.07
COL12A1-202ENST00000345356 ERCC4Q92889 916 aaPredicted RBP14.59□□□□□ -0.07
COL12A1-202ENST00000345356 FIBPO43427 364 aa14.59□□□□□ -0.07
COL12A1-202ENST00000345356 CCDC144AA2RUR9 1427 aa14.58□□□□□ -0.07
COL12A1-202ENST00000345356 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
COL12A1-202ENST00000345356 SKIDA1Q1XH10 827 aa14.58□□□□□ -0.08
COL12A1-202ENST00000345356 PDILTQ8N807 584 aa14.57□□□□□ -0.08
COL12A1-202ENST00000345356 DEF6Q9H4E7 631 aa14.57□□□□□ -0.08
COL12A1-202ENST00000345356 RIPK4P57078 832 aa14.56□□□□□ -0.08
COL12A1-202ENST00000345356 HSP90AB3PQ58FF7 597 aa14.56□□□□□ -0.08
COL12A1-202ENST00000345356 BBXQ8WY36 941 aaPredicted RBP14.56□□□□□ -0.08
COL12A1-202ENST00000345356 CCDC192P0DO97 292 aa14.56□□□□□ -0.08
COL12A1-202ENST00000345356 MCM2P49736 904 aa14.56□□□□□ -0.08
COL12A1-202ENST00000345356 SMC2O95347 1197 aa14.56□□□□□ -0.08
COL12A1-202ENST00000345356 TSPYL1Q9H0U9 437 aa14.56□□□□□ -0.08
COL12A1-202ENST00000345356 SYCE3A1L190 88 aa14.55□□□□□ -0.08
COL12A1-202ENST00000345356 FOSBP53539 338 aa14.55□□□□□ -0.08
COL12A1-202ENST00000345356 TAF7LQ5H9L4 462 aa14.55□□□□□ -0.08
COL12A1-202ENST00000345356 ANKRD20A12PQ8NF67 263 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms