RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 UGGT2Q9NYU1 1516 aa12.31□□□□□ -0.44
SEC24C-202ENST00000345254 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
SEC24C-202ENST00000345254 DEKP35659 375 aaKnown RBP12.31□□□□□ -0.44
SEC24C-202ENST00000345254 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
SEC24C-202ENST00000345254 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
SEC24C-202ENST00000345254 A2MP01023 1474 aa12.3□□□□□ -0.44
SEC24C-202ENST00000345254 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
SEC24C-202ENST00000345254 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
SEC24C-202ENST00000345254 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
SEC24C-202ENST00000345254 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
SEC24C-202ENST00000345254 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
SEC24C-202ENST00000345254 TMX4Q9H1E5 349 aaPredicted RBP12.29□□□□□ -0.44
SEC24C-202ENST00000345254 RAPGEF6Q8TEU7 1601 aa12.28□□□□□ -0.44
SEC24C-202ENST00000345254 KDM6BO15054 1643 aa12.28□□□□□ -0.44
SEC24C-202ENST00000345254 ATP10AO60312 1499 aa12.28□□□□□ -0.44
SEC24C-202ENST00000345254 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
SEC24C-202ENST00000345254 DISP3Q9P2K9 1392 aa12.27□□□□□ -0.44
SEC24C-202ENST00000345254 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.44
SEC24C-202ENST00000345254 UHRF1BP1LA0JNW5 1464 aa12.27□□□□□ -0.44
SEC24C-202ENST00000345254 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
SEC24C-202ENST00000345254 ST20-MTHFSA0A0A6YYL1 179 aa12.27□□□□□ -0.45
SEC24C-202ENST00000345254 UPF2Q9HAU5 1272 aaKnown RBP12.27□□□□□ -0.45
SEC24C-202ENST00000345254 U2AF1L5P0DN76 240 aaPredicted RBP12.25□□□□□ -0.45
SEC24C-202ENST00000345254 U2AF1Q01081 240 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEC24C-202ENST00000345254 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
SEC24C-202ENST00000345254 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
SEC24C-202ENST00000345254 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
SEC24C-202ENST00000345254 ERBINQ96RT1 1412 aa12.25□□□□□ -0.45
SEC24C-202ENST00000345254 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
SEC24C-202ENST00000345254 C19orf44Q9H6X5 657 aa12.24□□□□□ -0.45
SEC24C-202ENST00000345254 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
SEC24C-202ENST00000345254 DAPK1P53355 1430 aa12.24□□□□□ -0.45
SEC24C-202ENST00000345254 CNTLNQ9NXG0 1405 aa12.24□□□□□ -0.45
SEC24C-202ENST00000345254 GPATCH8Q9UKJ3 1502 aaKnown RBP12.24□□□□□ -0.45
SEC24C-202ENST00000345254 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
SEC24C-202ENST00000345254 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
SEC24C-202ENST00000345254 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
SEC24C-202ENST00000345254 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
SEC24C-202ENST00000345254 TIAM1Q13009 1591 aa12.23□□□□□ -0.45
SEC24C-202ENST00000345254 KCNA6P17658 529 aa12.22□□□□□ -0.45
SEC24C-202ENST00000345254 IPO9Q96P70 1041 aaKnown RBP12.22□□□□□ -0.45
SEC24C-202ENST00000345254 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
SEC24C-202ENST00000345254 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
SEC24C-202ENST00000345254 CDK19Q9BWU1 502 aa12.22□□□□□ -0.45
SEC24C-202ENST00000345254 ZNF335Q9H4Z2 1342 aaPredicted RBP12.22□□□□□ -0.45
SEC24C-202ENST00000345254 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
SEC24C-202ENST00000345254 NEO1Q92859 1461 aa12.21□□□□□ -0.45
SEC24C-202ENST00000345254 LRRC59Q96AG4 307 aaKnown RBP12.21□□□□□ -0.46
SEC24C-202ENST00000345254 RPGRIP1LQ68CZ1 1315 aa12.21□□□□□ -0.46
SEC24C-202ENST00000345254 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
SEC24C-202ENST00000345254 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
SEC24C-202ENST00000345254 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
SEC24C-202ENST00000345254 RALBP1Q15311 655 aa12.2□□□□□ -0.46
SEC24C-202ENST00000345254 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
SEC24C-202ENST00000345254 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
SEC24C-202ENST00000345254 GGNBP2Q9H3C7 697 aa12.19□□□□□ -0.46
SEC24C-202ENST00000345254 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
SEC24C-202ENST00000345254 TEFQ10587 303 aa12.18□□□□□ -0.46
SEC24C-202ENST00000345254 BECN1Q14457 450 aa12.18□□□□□ -0.46
SEC24C-202ENST00000345254 G3V3G9 751 aa12.17□□□□□ -0.46
SEC24C-202ENST00000345254 EIF5BO60841 1220 aaKnown RBP12.17□□□□□ -0.46
SEC24C-202ENST00000345254 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
SEC24C-202ENST00000345254 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
SEC24C-202ENST00000345254 RTEL1-TNFRSF6BF6WH68 1400 aa12.17□□□□□ -0.46
SEC24C-202ENST00000345254 NPHP3Q7Z494 1330 aa12.17□□□□□ -0.46
SEC24C-202ENST00000345254 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
SEC24C-202ENST00000345254 CHRNA2Q15822 529 aa12.17□□□□□ -0.46
SEC24C-202ENST00000345254 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
SEC24C-202ENST00000345254 TTC5Q8N0Z6 440 aa12.16□□□□□ -0.46
SEC24C-202ENST00000345254 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
SEC24C-202ENST00000345254 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
SEC24C-202ENST00000345254 ABCC5O15440 1437 aa12.16□□□□□ -0.46
SEC24C-202ENST00000345254 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
SEC24C-202ENST00000345254 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
SEC24C-202ENST00000345254 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
SEC24C-202ENST00000345254 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
SEC24C-202ENST00000345254 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
SEC24C-202ENST00000345254 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
SEC24C-202ENST00000345254 HFM1A2PYH4 1435 aa12.15□□□□□ -0.47
SEC24C-202ENST00000345254 GOLGA2Q08379 1002 aa12.14□□□□□ -0.47
SEC24C-202ENST00000345254 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
SEC24C-202ENST00000345254 CGNL1Q0VF96 1302 aa12.14□□□□□ -0.47
SEC24C-202ENST00000345254 CCDC7Q96M83 1385 aa12.14□□□□□ -0.47
SEC24C-202ENST00000345254 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
SEC24C-202ENST00000345254 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
SEC24C-202ENST00000345254 KIAA1107Q9UPP5 1409 aa12.13□□□□□ -0.47
SEC24C-202ENST00000345254 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
SEC24C-202ENST00000345254 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
SEC24C-202ENST00000345254 ADGRF5Q8IZF2 1346 aa12.12□□□□□ -0.47
SEC24C-202ENST00000345254 NCOA1Q15788 1441 aa12.12□□□□□ -0.47
SEC24C-202ENST00000345254 PANK3Q9H999 370 aa12.12□□□□□ -0.47
SEC24C-202ENST00000345254 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
SEC24C-202ENST00000345254 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
SEC24C-202ENST00000345254 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
SEC24C-202ENST00000345254 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
SEC24C-202ENST00000345254 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
SEC24C-202ENST00000345254 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
SEC24C-202ENST00000345254 LTKP29376 864 aa12.11□□□□□ -0.47
SEC24C-202ENST00000345254 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
SEC24C-202ENST00000345254 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms