RNA–Protein interactions for RNA: ENST00000345239.6

GFM2-202, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 1 (best) BASIC

Gene GFM2, Length 2,856 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-202ENST00000345239 IQGAP1P46940 1657 aa13.16□□□□□ -0.3
GFM2-202ENST00000345239 A2ML1A8K2U0 1454 aa13.14□□□□□ -0.31
GFM2-202ENST00000345239 TNRQ92752 1358 aa13.14□□□□□ -0.31
GFM2-202ENST00000345239 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
GFM2-202ENST00000345239 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
GFM2-202ENST00000345239 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
GFM2-202ENST00000345239 SLIT1O75093 1534 aa13.13□□□□□ -0.31
GFM2-202ENST00000345239 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
GFM2-202ENST00000345239 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
GFM2-202ENST00000345239 CEP170BQ9Y4F5 1589 aaPredicted RBP13.1□□□□□ -0.31
GFM2-202ENST00000345239 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
GFM2-202ENST00000345239 NRXN3Q9Y4C0 1643 aa13.08□□□□□ -0.32
GFM2-202ENST00000345239 NBPF8Q3BBV2 869 aa13.08□□□□□ -0.32
GFM2-202ENST00000345239 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
GFM2-202ENST00000345239 IDI1Q13907 227 aa13.07□□□□□ -0.32
GFM2-202ENST00000345239 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
GFM2-202ENST00000345239 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
GFM2-202ENST00000345239 PTPRMP28827 1452 aa13.06□□□□□ -0.32
GFM2-202ENST00000345239 MLECQ14165 292 aa13.06□□□□□ -0.32
GFM2-202ENST00000345239 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
GFM2-202ENST00000345239 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
GFM2-202ENST00000345239 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
GFM2-202ENST00000345239 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
GFM2-202ENST00000345239 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
GFM2-202ENST00000345239 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.32
GFM2-202ENST00000345239 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.32
GFM2-202ENST00000345239 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
GFM2-202ENST00000345239 ALKQ9UM73 1620 aa13.02□□□□□ -0.33
GFM2-202ENST00000345239 TMEM2Q9UHN6 1383 aa13.02□□□□□ -0.33
GFM2-202ENST00000345239 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
GFM2-202ENST00000345239 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
GFM2-202ENST00000345239 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
GFM2-202ENST00000345239 MED14O60244 1454 aa13□□□□□ -0.33
GFM2-202ENST00000345239 USP47Q96K76 1375 aa12.99□□□□□ -0.33
GFM2-202ENST00000345239 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
GFM2-202ENST00000345239 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.99□□□□□ -0.33
GFM2-202ENST00000345239 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
GFM2-202ENST00000345239 PLEKHG1Q9ULL1 1385 aa12.98□□□□□ -0.33
GFM2-202ENST00000345239 SBNO2Q9Y2G9 1366 aa12.98□□□□□ -0.33
GFM2-202ENST00000345239 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
GFM2-202ENST00000345239 CPS1P31327 1500 aa12.97□□□□□ -0.33
GFM2-202ENST00000345239 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
GFM2-202ENST00000345239 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
GFM2-202ENST00000345239 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.33
GFM2-202ENST00000345239 TECPR2O15040 1411 aa12.96□□□□□ -0.34
GFM2-202ENST00000345239 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
GFM2-202ENST00000345239 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
GFM2-202ENST00000345239 BCL11AQ9H165 835 aa12.95□□□□□ -0.34
GFM2-202ENST00000345239 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
GFM2-202ENST00000345239 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
GFM2-202ENST00000345239 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
GFM2-202ENST00000345239 ADAMTS13Q76LX8 1427 aa12.93□□□□□ -0.34
GFM2-202ENST00000345239 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
GFM2-202ENST00000345239 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
GFM2-202ENST00000345239 ADGRB2O60241 1585 aa12.92□□□□□ -0.34
GFM2-202ENST00000345239 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
GFM2-202ENST00000345239 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
GFM2-202ENST00000345239 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
GFM2-202ENST00000345239 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
GFM2-202ENST00000345239 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
GFM2-202ENST00000345239 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
GFM2-202ENST00000345239 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
GFM2-202ENST00000345239 MYOM1P52179 1685 aa12.9□□□□□ -0.34
GFM2-202ENST00000345239 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
GFM2-202ENST00000345239 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.35
GFM2-202ENST00000345239 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.35
GFM2-202ENST00000345239 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
GFM2-202ENST00000345239 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
GFM2-202ENST00000345239 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
GFM2-202ENST00000345239 CFAP70Q5T0N1 1121 aa12.88□□□□□ -0.35
GFM2-202ENST00000345239 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
GFM2-202ENST00000345239 ABCC11Q96J66 1382 aa12.88□□□□□ -0.35
GFM2-202ENST00000345239 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
GFM2-202ENST00000345239 MIER1Q8N108 512 aa12.87□□□□□ -0.35
GFM2-202ENST00000345239 TESK2Q96S53 571 aa12.87□□□□□ -0.35
GFM2-202ENST00000345239 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
GFM2-202ENST00000345239 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
GFM2-202ENST00000345239 TULP4Q9NRJ4 1543 aa12.84□□□□□ -0.35
GFM2-202ENST00000345239 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
GFM2-202ENST00000345239 EID1Q9Y6B2 187 aa12.84□□□□□ -0.35
GFM2-202ENST00000345239 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
GFM2-202ENST00000345239 LTKP29376 864 aa12.83□□□□□ -0.36
GFM2-202ENST00000345239 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
GFM2-202ENST00000345239 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
GFM2-202ENST00000345239 KIF7Q2M1P5 1343 aa12.82□□□□□ -0.36
GFM2-202ENST00000345239 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
GFM2-202ENST00000345239 ST20-MTHFSA0A0A6YYL1 179 aa12.82□□□□□ -0.36
GFM2-202ENST00000345239 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
GFM2-202ENST00000345239 METP08581 1390 aa12.81□□□□□ -0.36
GFM2-202ENST00000345239 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
GFM2-202ENST00000345239 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
GFM2-202ENST00000345239 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
GFM2-202ENST00000345239 TXNDC2Q86VQ3 553 aa12.8□□□□□ -0.36
GFM2-202ENST00000345239 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
GFM2-202ENST00000345239 NKTRP30414 1462 aaKnown RBP12.8□□□□□ -0.36
GFM2-202ENST00000345239 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
GFM2-202ENST00000345239 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
GFM2-202ENST00000345239 NINLQ9Y2I6 1382 aa12.79□□□□□ -0.36
GFM2-202ENST00000345239 TMF1P82094 1093 aa12.78□□□□□ -0.36
GFM2-202ENST00000345239 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms