RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 TET3O43151 1660 aa20.83■□□□□ 0.92
CLCN2-202ENST00000344937 VWDEQ8N2E2 1590 aa20.82■□□□□ 0.92
CLCN2-202ENST00000344937 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
CLCN2-202ENST00000344937 UGGT1Q9NYU2 1555 aa20.82■□□□□ 0.92
CLCN2-202ENST00000344937 YEATS2Q9ULM3 1422 aa20.82■□□□□ 0.92
CLCN2-202ENST00000344937 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
CLCN2-202ENST00000344937 DIP2BQ9P265 1576 aa20.81■□□□□ 0.92
CLCN2-202ENST00000344937 SPHKAPQ2M3C7 1700 aa20.8■□□□□ 0.92
CLCN2-202ENST00000344937 PTPRTO14522 1441 aa20.8■□□□□ 0.92
CLCN2-202ENST00000344937 CLTCL1P53675 1640 aa20.8■□□□□ 0.92
CLCN2-202ENST00000344937 RCAN3Q9UKA8 241 aa20.79■□□□□ 0.92
CLCN2-202ENST00000344937 CEP152O94986 1710 aa20.79■□□□□ 0.92
CLCN2-202ENST00000344937 TRPM2O94759 1503 aa20.79■□□□□ 0.92
CLCN2-202ENST00000344937 WASHC2CQ9Y4E1 1318 aa20.79■□□□□ 0.92
CLCN2-202ENST00000344937 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
CLCN2-202ENST00000344937 GLI2P10070 1586 aa20.78■□□□□ 0.92
CLCN2-202ENST00000344937 RICTORQ6R327 1708 aa20.77■□□□□ 0.92
CLCN2-202ENST00000344937 PPRC1Q5VV67 1664 aaKnown RBP20.76■□□□□ 0.91
CLCN2-202ENST00000344937 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
CLCN2-202ENST00000344937 TRPM1Q7Z4N2 1603 aa20.76■□□□□ 0.91
CLCN2-202ENST00000344937 DIP2CQ9Y2E4 1556 aa20.74■□□□□ 0.91
CLCN2-202ENST00000344937 EFCAB6Q5THR3 1501 aa20.74■□□□□ 0.91
CLCN2-202ENST00000344937 NEFMP07197 916 aa20.73■□□□□ 0.91
CLCN2-202ENST00000344937 PDE4AP27815 886 aa20.72■□□□□ 0.91
CLCN2-202ENST00000344937 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
CLCN2-202ENST00000344937 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
CLCN2-202ENST00000344937 NPATQ14207 1427 aa20.71■□□□□ 0.91
CLCN2-202ENST00000344937 SLC4A3P48751 1232 aa20.71■□□□□ 0.91
CLCN2-202ENST00000344937 RNF123Q5XPI4 1314 aa20.7■□□□□ 0.9
CLCN2-202ENST00000344937 MYBBP1AQ9BQG0 1328 aaKnown RBP20.7■□□□□ 0.9
CLCN2-202ENST00000344937 POLR1AO95602 1720 aaPredicted RBP20.69■□□□□ 0.9
CLCN2-202ENST00000344937 GPRASP1Q5JY77 1395 aa20.66■□□□□ 0.9
CLCN2-202ENST00000344937 ABCC3O15438 1527 aa20.66■□□□□ 0.9
CLCN2-202ENST00000344937 LMTK2Q8IWU2 1503 aa20.66■□□□□ 0.9
CLCN2-202ENST00000344937 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
CLCN2-202ENST00000344937 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
CLCN2-202ENST00000344937 CRBNQ96SW2 442 aa20.65■□□□□ 0.9
CLCN2-202ENST00000344937 BRPF3Q9ULD4 1205 aa20.64■□□□□ 0.89
CLCN2-202ENST00000344937 RALBP1Q15311 655 aa20.64■□□□□ 0.89
CLCN2-202ENST00000344937 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
CLCN2-202ENST00000344937 MLECQ14165 292 aa20.63■□□□□ 0.89
CLCN2-202ENST00000344937 CFAP70Q5T0N1 1121 aa20.63■□□□□ 0.89
CLCN2-202ENST00000344937 MADDQ8WXG6 1647 aa20.63■□□□□ 0.89
CLCN2-202ENST00000344937 COL17A1Q9UMD9 1497 aaPredicted RBP20.63■□□□□ 0.89
CLCN2-202ENST00000344937 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
CLCN2-202ENST00000344937 TESK2Q96S53 571 aa20.62■□□□□ 0.89
CLCN2-202ENST00000344937 KIF13AQ9H1H9 1805 aa20.62■□□□□ 0.89
CLCN2-202ENST00000344937 C20orf194Q5TEA3 1177 aa20.62■□□□□ 0.89
CLCN2-202ENST00000344937 KIF1BO60333 1816 aa20.61■□□□□ 0.89
CLCN2-202ENST00000344937 MROH2AA6NES4 1674 aa20.61■□□□□ 0.89
CLCN2-202ENST00000344937 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
CLCN2-202ENST00000344937 DISP3Q9P2K9 1392 aa20.6■□□□□ 0.89
CLCN2-202ENST00000344937 PKNOX2Q96KN3 472 aa20.6■□□□□ 0.89
CLCN2-202ENST00000344937 PANK3Q9H999 370 aa20.6■□□□□ 0.89
CLCN2-202ENST00000344937 KTN1Q86UP2 1357 aaKnown RBP20.6■□□□□ 0.89
CLCN2-202ENST00000344937 SIGLEC1Q9BZZ2 1709 aa20.59■□□□□ 0.89
CLCN2-202ENST00000344937 ARID4BQ4LE39 1312 aaPredicted RBP20.59■□□□□ 0.89
CLCN2-202ENST00000344937 BACH2Q9BYV9 841 aa20.58■□□□□ 0.89
CLCN2-202ENST00000344937 CAMSAP1Q5T5Y3 1602 aa20.58■□□□□ 0.89
CLCN2-202ENST00000344937 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.89
CLCN2-202ENST00000344937 FBXO31Q5XUX0 539 aaPredicted RBP20.58■□□□□ 0.89
CLCN2-202ENST00000344937 NOS1P29475 1434 aa20.57■□□□□ 0.88
CLCN2-202ENST00000344937 ZMYM4Q5VZL5 1548 aa20.56■□□□□ 0.88
CLCN2-202ENST00000344937 USP35Q9P2H5 1018 aa20.56■□□□□ 0.88
CLCN2-202ENST00000344937 IDI1Q13907 227 aa20.55■□□□□ 0.88
CLCN2-202ENST00000344937 RGS3P49796 1198 aa20.54■□□□□ 0.88
CLCN2-202ENST00000344937 LRPPRCP42704 1394 aaKnown RBP20.54■□□□□ 0.88
CLCN2-202ENST00000344937 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
CLCN2-202ENST00000344937 STAC3Q96MF2 364 aa20.53■□□□□ 0.88
CLCN2-202ENST00000344937 LAMC1P11047 1609 aa20.53■□□□□ 0.88
CLCN2-202ENST00000344937 TMF1P82094 1093 aa20.52■□□□□ 0.88
CLCN2-202ENST00000344937 ADGRB3O60242 1522 aa20.52■□□□□ 0.88
CLCN2-202ENST00000344937 SYNMO15061 1565 aa20.52■□□□□ 0.87
CLCN2-202ENST00000344937 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
CLCN2-202ENST00000344937 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
CLCN2-202ENST00000344937 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
CLCN2-202ENST00000344937 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
CLCN2-202ENST00000344937 MYOM2P54296 1465 aa20.48■□□□□ 0.87
CLCN2-202ENST00000344937 PER1O15534 1290 aaPredicted RBP20.48■□□□□ 0.87
CLCN2-202ENST00000344937 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
CLCN2-202ENST00000344937 IQGAP1P46940 1657 aa20.47■□□□□ 0.87
CLCN2-202ENST00000344937 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
CLCN2-202ENST00000344937 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
CLCN2-202ENST00000344937 ARHGAP31Q2M1Z3 1444 aa20.46■□□□□ 0.87
CLCN2-202ENST00000344937 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
CLCN2-202ENST00000344937 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLCN2-202ENST00000344937 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
CLCN2-202ENST00000344937 TRHP20396 242 aaPredicted RBP20.43■□□□□ 0.86
CLCN2-202ENST00000344937 PPLO60437 1756 aa20.43■□□□□ 0.86
CLCN2-202ENST00000344937 GSE1Q14687 1217 aa20.42■□□□□ 0.86
CLCN2-202ENST00000344937 SLC52A1Q9NWF4 448 aa20.42■□□□□ 0.86
CLCN2-202ENST00000344937 NRXN1Q9ULB1 1477 aa20.41■□□□□ 0.86
CLCN2-202ENST00000344937 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
CLCN2-202ENST00000344937 PREX1Q8TCU6 1659 aa20.41■□□□□ 0.86
CLCN2-202ENST00000344937 C14orf93Q9H972 538 aaKnown RBP20.41■□□□□ 0.86
CLCN2-202ENST00000344937 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
CLCN2-202ENST00000344937 PIK3C2GO75747 1445 aa20.4■□□□□ 0.86
CLCN2-202ENST00000344937 MYO5BQ9ULV0 1848 aa20.4■□□□□ 0.86
CLCN2-202ENST00000344937 PPM1GO15355 546 aaPredicted RBP20.4■□□□□ 0.86
CLCN2-202ENST00000344937 MS4A1P11836 297 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms