RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
HERPUD1-202ENST00000344114 CHD2O14647 1828 aaKnown RBP20.17■□□□□ 0.82
HERPUD1-202ENST00000344114 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
HERPUD1-202ENST00000344114 PHLPP1O60346 1717 aa20.17■□□□□ 0.82
HERPUD1-202ENST00000344114 MYO5BQ9ULV0 1848 aa20.15■□□□□ 0.82
HERPUD1-202ENST00000344114 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
HERPUD1-202ENST00000344114 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.81
HERPUD1-202ENST00000344114 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
HERPUD1-202ENST00000344114 SLC52A1Q9NWF4 448 aa20.13■□□□□ 0.81
HERPUD1-202ENST00000344114 MSH6P52701 1360 aa20.13■□□□□ 0.81
HERPUD1-202ENST00000344114 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
HERPUD1-202ENST00000344114 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
HERPUD1-202ENST00000344114 GCC2Q8IWJ2 1684 aa20.12■□□□□ 0.81
HERPUD1-202ENST00000344114 SETD1AO15047 1707 aaKnown RBP20.12■□□□□ 0.81
HERPUD1-202ENST00000344114 COL16A1Q07092 1604 aaPredicted RBP20.11■□□□□ 0.81
HERPUD1-202ENST00000344114 CHIC2Q9UKJ5 165 aa20.1■□□□□ 0.81
HERPUD1-202ENST00000344114 JCADQ9P266 1359 aa20.09■□□□□ 0.81
HERPUD1-202ENST00000344114 PLEKHG1Q9ULL1 1385 aa20.09■□□□□ 0.81
HERPUD1-202ENST00000344114 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
HERPUD1-202ENST00000344114 SLAIN2Q9P270 581 aa20.08■□□□□ 0.81
HERPUD1-202ENST00000344114 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
HERPUD1-202ENST00000344114 RIMS2Q9UQ26 1411 aa20.05■□□□□ 0.8
HERPUD1-202ENST00000344114 BCANQ96GW7 911 aa20.04■□□□□ 0.8
HERPUD1-202ENST00000344114 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
HERPUD1-202ENST00000344114 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.03■□□□□ 0.8
HERPUD1-202ENST00000344114 SHPRHQ149N8 1683 aa20.02■□□□□ 0.8
HERPUD1-202ENST00000344114 LRP6O75581 1613 aa20.02■□□□□ 0.8
HERPUD1-202ENST00000344114 AHDC1Q5TGY3 1603 aaPredicted RBP20.02■□□□□ 0.8
HERPUD1-202ENST00000344114 UNC13BO14795 1591 aa20.02■□□□□ 0.8
HERPUD1-202ENST00000344114 DIP2AQ14689 1571 aa20.02■□□□□ 0.8
HERPUD1-202ENST00000344114 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
HERPUD1-202ENST00000344114 TBX22Q9Y458 520 aa20.01■□□□□ 0.79
HERPUD1-202ENST00000344114 HDGFP51858 240 aaKnown RBP20■□□□□ 0.79
HERPUD1-202ENST00000344114 E9PCH4 1651 aa20■□□□□ 0.79
HERPUD1-202ENST00000344114 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
HERPUD1-202ENST00000344114 FAM50AQ14320 339 aaKnown RBP19.99■□□□□ 0.79
HERPUD1-202ENST00000344114 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
HERPUD1-202ENST00000344114 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
HERPUD1-202ENST00000344114 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
HERPUD1-202ENST00000344114 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
HERPUD1-202ENST00000344114 CADPS2Q86UW7 1296 aa19.94■□□□□ 0.78
HERPUD1-202ENST00000344114 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
HERPUD1-202ENST00000344114 IQGAP3Q86VI3 1631 aa19.93■□□□□ 0.78
HERPUD1-202ENST00000344114 TRPM2O94759 1503 aa19.93■□□□□ 0.78
HERPUD1-202ENST00000344114 ZNF772Q68DY9 489 aaPredicted RBP19.93■□□□□ 0.78
HERPUD1-202ENST00000344114 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
HERPUD1-202ENST00000344114 ITGAEP38570 1179 aa19.91■□□□□ 0.78
HERPUD1-202ENST00000344114 C14orf37Q86TY3 774 aa19.9■□□□□ 0.78
HERPUD1-202ENST00000344114 UPF1Q92900 1129 aaKnown RBP eCLIP19.9■□□□□ 0.78
HERPUD1-202ENST00000344114 PTPRUQ92729 1446 aa19.9■□□□□ 0.78
HERPUD1-202ENST00000344114 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
HERPUD1-202ENST00000344114 ATF3P18847 181 aa19.89■□□□□ 0.77
HERPUD1-202ENST00000344114 MEX3CQ5U5Q3 659 aaKnown RBP19.89■□□□□ 0.77
HERPUD1-202ENST00000344114 XRN1Q8IZH2 1706 aaKnown RBP19.89■□□□□ 0.77
HERPUD1-202ENST00000344114 DCCP43146 1447 aa19.89■□□□□ 0.77
HERPUD1-202ENST00000344114 NRXN3Q9Y4C0 1643 aa19.88■□□□□ 0.77
HERPUD1-202ENST00000344114 NUTM2DQ5VT03 806 aaPredicted RBP19.88■□□□□ 0.77
HERPUD1-202ENST00000344114 NHSL1Q5SYE7 1610 aa19.88■□□□□ 0.77
HERPUD1-202ENST00000344114 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
HERPUD1-202ENST00000344114 CDK12Q9NYV4 1490 aaPredicted RBP19.87■□□□□ 0.77
HERPUD1-202ENST00000344114 BRINP3Q76B58 766 aa19.86■□□□□ 0.77
HERPUD1-202ENST00000344114 ASXL1Q8IXJ9 1541 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 HFM1A2PYH4 1435 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 CLSPNQ9HAW4 1339 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 AMOTL2Q9Y2J4 779 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 SETBP1Q9Y6X0 1596 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 DHX57Q6P158 1386 aaKnown RBP19.85■□□□□ 0.77
HERPUD1-202ENST00000344114 MST1RQ04912 1400 aa19.82■□□□□ 0.76
HERPUD1-202ENST00000344114 RXRBP28702 533 aa19.82■□□□□ 0.76
HERPUD1-202ENST00000344114 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
HERPUD1-202ENST00000344114 NAIPQ13075 1403 aa19.78■□□□□ 0.76
HERPUD1-202ENST00000344114 NUP155O75694 1391 aa19.78■□□□□ 0.76
HERPUD1-202ENST00000344114 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
HERPUD1-202ENST00000344114 AFF2P51816 1311 aa19.77■□□□□ 0.76
HERPUD1-202ENST00000344114 NUTM2BA6NNL0 878 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-202ENST00000344114 NUTM2EB1AL46 878 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-202ENST00000344114 NUTM2AQ8IVF1 878 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-202ENST00000344114 ADGRL3Q9HAR2 1447 aa19.75■□□□□ 0.75
HERPUD1-202ENST00000344114 METP08581 1390 aa19.74■□□□□ 0.75
HERPUD1-202ENST00000344114 LRRC59Q96AG4 307 aaKnown RBP19.74■□□□□ 0.75
HERPUD1-202ENST00000344114 LAMC1P11047 1609 aa19.74■□□□□ 0.75
HERPUD1-202ENST00000344114 RGS12O14924 1447 aa19.74■□□□□ 0.75
HERPUD1-202ENST00000344114 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
HERPUD1-202ENST00000344114 NEXMIFQ5QGS0 1516 aa19.72■□□□□ 0.75
HERPUD1-202ENST00000344114 CLTCL1P53675 1640 aa19.7■□□□□ 0.74
HERPUD1-202ENST00000344114 RBM6P78332 1123 aaKnown RBP19.69■□□□□ 0.74
HERPUD1-202ENST00000344114 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
HERPUD1-202ENST00000344114 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
HERPUD1-202ENST00000344114 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
HERPUD1-202ENST00000344114 KIF1BO60333 1816 aa19.67■□□□□ 0.74
HERPUD1-202ENST00000344114 ZNF326Q5BKZ1 582 aaKnown RBP19.67■□□□□ 0.74
HERPUD1-202ENST00000344114 ACIN1Q9UKV3 1341 aaKnown RBP19.67■□□□□ 0.74
HERPUD1-202ENST00000344114 C1orf167Q5SNV9 1468 aa19.66■□□□□ 0.74
HERPUD1-202ENST00000344114 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
HERPUD1-202ENST00000344114 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
HERPUD1-202ENST00000344114 COL22A1Q8NFW1 1626 aaPredicted RBP19.62■□□□□ 0.73
HERPUD1-202ENST00000344114 SOS2Q07890 1332 aaPredicted RBP19.61■□□□□ 0.73
HERPUD1-202ENST00000344114 NGLY1Q96IV0 654 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms