RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 APAF1O14727 1248 aa14.83□□□□□ -0.04
SEMA6A-202ENST00000343348 IPO7O95373 1038 aaKnown RBP14.83□□□□□ -0.04
SEMA6A-202ENST00000343348 TCEAL9Q9UHQ7 104 aa14.82□□□□□ -0.04
SEMA6A-202ENST00000343348 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.82□□□□□ -0.04
SEMA6A-202ENST00000343348 C9orf78Q9NZ63 289 aaPredicted RBP14.82□□□□□ -0.04
SEMA6A-202ENST00000343348 DHX16O60231 1041 aaKnown RBP14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 RNF214Q8ND24 703 aa14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 CPLX1O14810 134 aa14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 E9PSI1 815 aa14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 RUFY1Q96T51 708 aa14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
SEMA6A-202ENST00000343348 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
SEMA6A-202ENST00000343348 ANKRD30AQ9BXX3 1397 aa14.8□□□□□ -0.04
SEMA6A-202ENST00000343348 PDILTQ8N807 584 aa14.8□□□□□ -0.04
SEMA6A-202ENST00000343348 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
SEMA6A-202ENST00000343348 MNS1Q8NEH6 495 aa14.8□□□□□ -0.04
SEMA6A-202ENST00000343348 C1orf141Q5JVX7 400 aa14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 LNPKQ9C0E8 428 aa14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 ZKSCAN1P17029 563 aaPredicted RBP14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 REC8O95072 547 aa14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 NFKBIBQ15653 356 aa14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 RBM10P98175 930 aaKnown RBP14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 FANCIQ9NVI1 1328 aa14.79□□□□□ -0.04
SEMA6A-202ENST00000343348 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
SEMA6A-202ENST00000343348 ANKRD20A12PQ8NF67 263 aa14.78□□□□□ -0.04
SEMA6A-202ENST00000343348 PHLDB1Q86UU1 1377 aa14.78□□□□□ -0.04
SEMA6A-202ENST00000343348 RUFY2Q8WXA3 655 aa14.78□□□□□ -0.04
SEMA6A-202ENST00000343348 CCDC27Q2M243 656 aa14.78□□□□□ -0.04
SEMA6A-202ENST00000343348 CPLX2Q6PUV4 134 aaKnown RBP14.77□□□□□ -0.05
SEMA6A-202ENST00000343348 MSH5O43196 834 aa14.77□□□□□ -0.05
SEMA6A-202ENST00000343348 AK7Q96M32 723 aa14.77□□□□□ -0.05
SEMA6A-202ENST00000343348 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
SEMA6A-202ENST00000343348 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
SEMA6A-202ENST00000343348 TRIM34Q9BYJ4 488 aa14.76□□□□□ -0.05
SEMA6A-202ENST00000343348 NASPP49321 788 aaPredicted RBP14.76□□□□□ -0.05
SEMA6A-202ENST00000343348 MAP7D2Q96T17 732 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 MTMR7Q9Y216 660 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 DHX37Q8IY37 1157 aaKnown RBP14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 CCDC47Q96A33 483 aaKnown RBP14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 FYB1O15117 783 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 TEFQ10587 303 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 HOOK1Q9UJC3 728 aaKnown RBP14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 DZIP1LQ8IYY4 767 aaKnown RBP14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 COG3Q96JB2 828 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 BRPF3Q9ULD4 1205 aa14.75□□□□□ -0.05
SEMA6A-202ENST00000343348 DDX19BQ9UMR2 479 aa14.74□□□□□ -0.05
SEMA6A-202ENST00000343348 RIPK4P57078 832 aa14.74□□□□□ -0.05
SEMA6A-202ENST00000343348 CGNL1Q0VF96 1302 aa14.74□□□□□ -0.05
SEMA6A-202ENST00000343348 CTDP1Q9Y5B0 961 aaPredicted RBP14.74□□□□□ -0.05
SEMA6A-202ENST00000343348 TRDNQ13061 729 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 VPS37DQ86XT2 251 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 PANK1Q8TE04 598 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 EVA1CP58658 441 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 NOL10Q9BSC4 688 aaKnown RBP14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 NOM1Q5C9Z4 860 aaKnown RBP14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 CAGE1Q8TC20 777 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 INTS3Q68E01 1043 aaKnown RBP14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 AMOTL1Q8IY63 956 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 MPNDQ8N594 471 aa14.73□□□□□ -0.05
SEMA6A-202ENST00000343348 SYTL4Q96C24 671 aaPredicted RBP14.72□□□□□ -0.05
SEMA6A-202ENST00000343348 FKBP5Q13451 457 aaPredicted RBP14.72□□□□□ -0.05
SEMA6A-202ENST00000343348 CAVIN1Q6NZI2 390 aaKnown RBP14.72□□□□□ -0.05
SEMA6A-202ENST00000343348 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.72□□□□□ -0.05
SEMA6A-202ENST00000343348 CT47A1Q5JQC4 288 aaPredicted RBP14.72□□□□□ -0.05
SEMA6A-202ENST00000343348 HSP90B2PQ58FF3 399 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 CCDC73Q6ZRK6 1079 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 IL27Q8NEV9 243 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 PLCD4Q9BRC7 762 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 SPC24Q8NBT2 197 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 CNKSR2Q8WXI2 1034 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 KLHL34Q8N239 644 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.05
SEMA6A-202ENST00000343348 NUCB2P80303 420 aa14.71□□□□□ -0.06
SEMA6A-202ENST00000343348 RNF20Q5VTR2 975 aa14.71□□□□□ -0.06
SEMA6A-202ENST00000343348 TTC5Q8N0Z6 440 aa14.71□□□□□ -0.06
SEMA6A-202ENST00000343348 ERICH2A1L162 156 aa14.7□□□□□ -0.06
SEMA6A-202ENST00000343348 H0YHG0 523 aa14.7□□□□□ -0.06
SEMA6A-202ENST00000343348 G3BP1Q13283 466 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEMA6A-202ENST00000343348 CCDC39Q9UFE4 941 aa14.7□□□□□ -0.06
SEMA6A-202ENST00000343348 HMOX1P09601 288 aa14.7□□□□□ -0.06
SEMA6A-202ENST00000343348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEMA6A-202ENST00000343348 LRRFIP1Q32MZ4 808 aaKnown RBP14.69□□□□□ -0.06
SEMA6A-202ENST00000343348 HSP90AB2PQ58FF8 381 aa14.69□□□□□ -0.06
SEMA6A-202ENST00000343348 ODF2Q5BJF6 829 aa14.69□□□□□ -0.06
SEMA6A-202ENST00000343348 FMNL2Q96PY5 1086 aa14.69□□□□□ -0.06
SEMA6A-202ENST00000343348 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
SEMA6A-202ENST00000343348 TRAK2O60296 914 aa14.68□□□□□ -0.06
SEMA6A-202ENST00000343348 EPS15P42566 896 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms