RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 TRIM44Q96DX7 344 aaPredicted RBP20.74■□□□□ 0.91
RDX-201ENST00000343115 NUP153P49790 1475 aaKnown RBP20.73■□□□□ 0.91
RDX-201ENST00000343115 EVC2Q86UK5 1308 aa20.73■□□□□ 0.91
RDX-201ENST00000343115 GOLGA6L22H0YM25 854 aa20.73■□□□□ 0.91
RDX-201ENST00000343115 FOXD4L1Q9NU39 408 aa20.73■□□□□ 0.91
RDX-201ENST00000343115 LMOD2Q6P5Q4 547 aa20.72■□□□□ 0.91
RDX-201ENST00000343115 SCAPERQ9BY12 1400 aa20.72■□□□□ 0.91
RDX-201ENST00000343115 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.71■□□□□ 0.91
RDX-201ENST00000343115 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
RDX-201ENST00000343115 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.91
RDX-201ENST00000343115 RUNDC1Q96C34 613 aa20.7■□□□□ 0.91
RDX-201ENST00000343115 CTTNBP2Q8WZ74 1663 aa20.69■□□□□ 0.9
RDX-201ENST00000343115 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
RDX-201ENST00000343115 WDR62O43379 1518 aa20.67■□□□□ 0.9
RDX-201ENST00000343115 RIPK4P57078 832 aa20.67■□□□□ 0.9
RDX-201ENST00000343115 CCDC141Q6ZP82 1450 aa20.66■□□□□ 0.9
RDX-201ENST00000343115 CHMP4BQ9H444 224 aaKnown RBP20.66■□□□□ 0.9
RDX-201ENST00000343115 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
RDX-201ENST00000343115 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
RDX-201ENST00000343115 GSE1Q14687 1217 aa20.65■□□□□ 0.9
RDX-201ENST00000343115 NFKBIBQ15653 356 aa20.65■□□□□ 0.9
RDX-201ENST00000343115 CASC1Q6TDU7 716 aa20.65■□□□□ 0.9
RDX-201ENST00000343115 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.9
RDX-201ENST00000343115 DZIP1LQ8IYY4 767 aaKnown RBP20.64■□□□□ 0.9
RDX-201ENST00000343115 HMOX1P09601 288 aa20.63■□□□□ 0.89
RDX-201ENST00000343115 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
RDX-201ENST00000343115 TSR2Q969E8 191 aaKnown RBP20.63■□□□□ 0.89
RDX-201ENST00000343115 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
RDX-201ENST00000343115 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
RDX-201ENST00000343115 MAGI3Q5TCQ9 1506 aa20.62■□□□□ 0.89
RDX-201ENST00000343115 ATP10BO94823 1461 aa20.62■□□□□ 0.89
RDX-201ENST00000343115 ANKRD45Q5TZF3 282 aa20.62■□□□□ 0.89
RDX-201ENST00000343115 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
RDX-201ENST00000343115 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
RDX-201ENST00000343115 NAP1L5Q96NT1 182 aaPredicted RBP20.61■□□□□ 0.89
RDX-201ENST00000343115 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
RDX-201ENST00000343115 RTF1Q92541 710 aaKnown RBP20.6■□□□□ 0.89
RDX-201ENST00000343115 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
RDX-201ENST00000343115 DHX29Q7Z478 1369 aaKnown RBP20.58■□□□□ 0.89
RDX-201ENST00000343115 SLFN5Q08AF3 891 aa20.58■□□□□ 0.88
RDX-201ENST00000343115 DISP1Q96F81 1524 aa20.57■□□□□ 0.88
RDX-201ENST00000343115 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
RDX-201ENST00000343115 EXOSC9Q06265 439 aaKnown RBP20.57■□□□□ 0.88
RDX-201ENST00000343115 ADGRF5Q8IZF2 1346 aa20.57■□□□□ 0.88
RDX-201ENST00000343115 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
RDX-201ENST00000343115 NGEFQ8N5V2 710 aa20.56■□□□□ 0.88
RDX-201ENST00000343115 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
RDX-201ENST00000343115 PZPP20742 1482 aa20.54■□□□□ 0.88
RDX-201ENST00000343115 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
RDX-201ENST00000343115 KIF14Q15058 1648 aa20.54■□□□□ 0.88
RDX-201ENST00000343115 HDGFP51858 240 aaKnown RBP20.54■□□□□ 0.88
RDX-201ENST00000343115 DUSP27Q5VZP5 1158 aa20.54■□□□□ 0.88
RDX-201ENST00000343115 L1TD1Q5T7N2 865 aaKnown RBP20.54■□□□□ 0.88
RDX-201ENST00000343115 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
RDX-201ENST00000343115 OS9Q13438 667 aaPredicted RBP20.53■□□□□ 0.88
RDX-201ENST00000343115 WWC1Q8IX03 1113 aa20.53■□□□□ 0.88
RDX-201ENST00000343115 DDX19BQ9UMR2 479 aa20.53■□□□□ 0.88
RDX-201ENST00000343115 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
RDX-201ENST00000343115 KIAA0556O60303 1618 aa20.52■□□□□ 0.88
RDX-201ENST00000343115 TESK2Q96S53 571 aa20.52■□□□□ 0.88
RDX-201ENST00000343115 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
RDX-201ENST00000343115 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
RDX-201ENST00000343115 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
RDX-201ENST00000343115 NOL8Q76FK4 1167 aaKnown RBP20.5■□□□□ 0.87
RDX-201ENST00000343115 KDM6BO15054 1643 aa20.5■□□□□ 0.87
RDX-201ENST00000343115 COG3Q96JB2 828 aa20.49■□□□□ 0.87
RDX-201ENST00000343115 PLCB2Q00722 1185 aa20.49■□□□□ 0.87
RDX-201ENST00000343115 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
RDX-201ENST00000343115 PER1O15534 1290 aaPredicted RBP20.48■□□□□ 0.87
RDX-201ENST00000343115 RALGAPBQ86X10 1494 aa20.48■□□□□ 0.87
RDX-201ENST00000343115 NUP160Q12769 1436 aa20.48■□□□□ 0.87
RDX-201ENST00000343115 GOLGA6L3A6NEY3 463 aa20.48■□□□□ 0.87
RDX-201ENST00000343115 PTMAP06454 111 aaKnown RBP20.48■□□□□ 0.87
RDX-201ENST00000343115 NGDNQ8NEJ9 315 aaKnown RBP20.48■□□□□ 0.87
RDX-201ENST00000343115 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
RDX-201ENST00000343115 FOXD4L5Q5VV16 416 aaPredicted RBP20.47■□□□□ 0.87
RDX-201ENST00000343115 FOXD4L4Q8WXT5 416 aaPredicted RBP20.47■□□□□ 0.87
RDX-201ENST00000343115 GBP4Q96PP9 640 aa20.47■□□□□ 0.87
RDX-201ENST00000343115 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
RDX-201ENST00000343115 A0A0G2JS52 829 aa20.46■□□□□ 0.87
RDX-201ENST00000343115 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
RDX-201ENST00000343115 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
RDX-201ENST00000343115 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
RDX-201ENST00000343115 C22orf23Q9BZE7 217 aa20.45■□□□□ 0.86
RDX-201ENST00000343115 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
RDX-201ENST00000343115 AMER1Q5JTC6 1135 aaPredicted RBP20.45■□□□□ 0.86
RDX-201ENST00000343115 CABP1Q9NZU7 370 aa20.45■□□□□ 0.86
RDX-201ENST00000343115 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
RDX-201ENST00000343115 AMPHP49418 695 aa20.45■□□□□ 0.86
RDX-201ENST00000343115 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
RDX-201ENST00000343115 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
RDX-201ENST00000343115 STK31Q9BXU1 1019 aa20.44■□□□□ 0.86
RDX-201ENST00000343115 TRIM6-TRIM34B2RNG4 842 aa20.43■□□□□ 0.86
RDX-201ENST00000343115 KCNJ4P48050 445 aa20.43■□□□□ 0.86
RDX-201ENST00000343115 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
RDX-201ENST00000343115 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
RDX-201ENST00000343115 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
RDX-201ENST00000343115 TAOK2Q9UL54 1235 aa20.42■□□□□ 0.86
RDX-201ENST00000343115 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
RDX-201ENST00000343115 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms