RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 BARGINQ6ZT62 677 aa7.2□□□□□ -1.26
LRRC39-201ENST00000342895 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
LRRC39-201ENST00000342895 NECTIN2Q92692 538 aa7.2□□□□□ -1.26
LRRC39-201ENST00000342895 BCAMP50895 628 aa7.19□□□□□ -1.26
LRRC39-201ENST00000342895 TMEM134Q9H6X4 195 aa7.19□□□□□ -1.26
LRRC39-201ENST00000342895 TSR3Q9UJK0 312 aaKnown RBP7.19□□□□□ -1.26
LRRC39-201ENST00000342895 RCCD1A6NED2 376 aa7.19□□□□□ -1.26
LRRC39-201ENST00000342895 IRF6O14896 467 aa7.19□□□□□ -1.26
LRRC39-201ENST00000342895 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
LRRC39-201ENST00000342895 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
LRRC39-201ENST00000342895 SWT1Q5T5J6 900 aaKnown RBP7.18□□□□□ -1.26
LRRC39-201ENST00000342895 SLF2Q8IX21 1173 aa7.18□□□□□ -1.26
LRRC39-201ENST00000342895 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
LRRC39-201ENST00000342895 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
LRRC39-201ENST00000342895 PTPN5P54829 565 aa7.17□□□□□ -1.26
LRRC39-201ENST00000342895 HPS5Q9UPZ3 1129 aa7.17□□□□□ -1.26
LRRC39-201ENST00000342895 PPP4CP60510 307 aa7.15□□□□□ -1.26
LRRC39-201ENST00000342895 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
LRRC39-201ENST00000342895 Q6ZNB5 142 aa7.14□□□□□ -1.27
LRRC39-201ENST00000342895 CCDC102AQ96A19 550 aa7.14□□□□□ -1.27
LRRC39-201ENST00000342895 PHOX2BQ99453 314 aa7.14□□□□□ -1.27
LRRC39-201ENST00000342895 KRI1Q8N9T8 703 aaKnown RBP7.13□□□□□ -1.27
LRRC39-201ENST00000342895 DAXXQ9UER7 740 aaPredicted RBP7.13□□□□□ -1.27
LRRC39-201ENST00000342895 RSPH4AQ5TD94 716 aa7.11□□□□□ -1.27
LRRC39-201ENST00000342895 IFFO2Q5TF58 517 aa7.11□□□□□ -1.27
LRRC39-201ENST00000342895 PRR14Q9BWN1 585 aa7.11□□□□□ -1.27
LRRC39-201ENST00000342895 RNF40O75150 1001 aa7.1□□□□□ -1.27
LRRC39-201ENST00000342895 SULF1Q8IWU6 871 aa7.1□□□□□ -1.27
LRRC39-201ENST00000342895 ITGBL1O95965 494 aaPredicted RBP7.09□□□□□ -1.27
LRRC39-201ENST00000342895 AK7Q96M32 723 aa7.09□□□□□ -1.27
LRRC39-201ENST00000342895 TMUB1Q9BVT8 246 aa7.09□□□□□ -1.27
LRRC39-201ENST00000342895 SLC10A3P09131 477 aa7.09□□□□□ -1.28
LRRC39-201ENST00000342895 AMHR2Q16671 573 aa7.09□□□□□ -1.28
LRRC39-201ENST00000342895 XP32Q5T750 250 aa7.09□□□□□ -1.28
LRRC39-201ENST00000342895 CLCN1P35523 988 aa7.08□□□□□ -1.28
LRRC39-201ENST00000342895 APLP1P51693 650 aa7.08□□□□□ -1.28
LRRC39-201ENST00000342895 KMT5BQ4FZB7 885 aa7.07□□□□□ -1.28
LRRC39-201ENST00000342895 GPCPD1Q9NPB8 672 aa7.07□□□□□ -1.28
LRRC39-201ENST00000342895 ACTN4O43707 911 aaKnown RBP7.07□□□□□ -1.28
LRRC39-201ENST00000342895 MDM2Q00987 491 aaPredicted RBP7.07□□□□□ -1.28
LRRC39-201ENST00000342895 NLRP7Q8WX94 980 aa7.07□□□□□ -1.28
LRRC39-201ENST00000342895 TRIM66O15016 1216 aa7.06□□□□□ -1.28
LRRC39-201ENST00000342895 CFHP08603 1231 aa7.06□□□□□ -1.28
LRRC39-201ENST00000342895 DDX11L8A8MPP1 907 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 CD46P15529 392 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 TJAP1Q5JTD0 557 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 GCGRP47871 477 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 KCNC4Q03721 635 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 RDH13Q8NBN7 331 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 IL21Q9HBE4 155 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 SLC24A3Q9HC58 644 aa7.04□□□□□ -1.28
LRRC39-201ENST00000342895 FAM217BQ9NTX9 383 aaPredicted RBP7.04□□□□□ -1.28
LRRC39-201ENST00000342895 MTRQ99707 1265 aa7.02□□□□□ -1.28
LRRC39-201ENST00000342895 PCDHB3Q9Y5E6 796 aa7.02□□□□□ -1.28
LRRC39-201ENST00000342895 REPIN1Q9BWE0 567 aaKnown RBP7.02□□□□□ -1.29
LRRC39-201ENST00000342895 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
LRRC39-201ENST00000342895 TTLL12Q14166 644 aaPredicted RBP7.01□□□□□ -1.29
LRRC39-201ENST00000342895 PDE4DQ08499 809 aa7□□□□□ -1.29
LRRC39-201ENST00000342895 GIGYF2Q6Y7W6 1299 aaKnown RBP7□□□□□ -1.29
LRRC39-201ENST00000342895 PARP9Q8IXQ6 854 aa7□□□□□ -1.29
LRRC39-201ENST00000342895 SSTR3P32745 418 aaPredicted RBP6.99□□□□□ -1.29
LRRC39-201ENST00000342895 NR1I2O75469 434 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 ATP6V1AP38606 617 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 USP46P62068 366 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 GRIPAP1Q4V328 841 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 BLOC1S3Q6QNY0 202 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 A0A0G2JS52 829 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 ZPR1O75312 459 aa6.98□□□□□ -1.29
LRRC39-201ENST00000342895 COPS2P61201 443 aa6.97□□□□□ -1.29
LRRC39-201ENST00000342895 FUT2Q10981 343 aa6.97□□□□□ -1.29
LRRC39-201ENST00000342895 MORN1Q5T089 497 aa6.97□□□□□ -1.29
LRRC39-201ENST00000342895 KDM4AO75164 1064 aa6.96□□□□□ -1.29
LRRC39-201ENST00000342895 ZNF516Q92618 1163 aa6.96□□□□□ -1.29
LRRC39-201ENST00000342895 SALL2Q9Y467 1007 aaPredicted RBP6.96□□□□□ -1.3
LRRC39-201ENST00000342895 SCUBE3Q8IX30 993 aa6.95□□□□□ -1.3
LRRC39-201ENST00000342895 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
LRRC39-201ENST00000342895 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
LRRC39-201ENST00000342895 PUS10Q3MIT2 529 aaKnown RBP6.94□□□□□ -1.3
LRRC39-201ENST00000342895 TPRNQ4KMQ1 711 aa6.94□□□□□ -1.3
LRRC39-201ENST00000342895 NUTM1Q86Y26 1132 aa6.94□□□□□ -1.3
LRRC39-201ENST00000342895 STK17AQ9UEE5 414 aa6.94□□□□□ -1.3
LRRC39-201ENST00000342895 HOXA2O43364 376 aa6.93□□□□□ -1.3
LRRC39-201ENST00000342895 MS4A1P11836 297 aa6.93□□□□□ -1.3
LRRC39-201ENST00000342895 ADH1BP00325 375 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 BEGAINQ9BUH8 593 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 SLC27A5Q9Y2P5 690 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 BTBD11A6QL63 1104 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 Q3C1V9 767 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
LRRC39-201ENST00000342895 GJA5P36382 358 aa6.91□□□□□ -1.3
LRRC39-201ENST00000342895 GGCXP38435 758 aa6.91□□□□□ -1.3
LRRC39-201ENST00000342895 NKX2-3Q8TAU0 364 aa6.91□□□□□ -1.3
LRRC39-201ENST00000342895 FMNL1O95466 1100 aaPredicted RBP6.9□□□□□ -1.3
LRRC39-201ENST00000342895 BRICD5Q6PL45 260 aa6.9□□□□□ -1.3
LRRC39-201ENST00000342895 PSMG3-AS1Q96PY0 264 aa6.9□□□□□ -1.31
LRRC39-201ENST00000342895 SPSB2Q99619 263 aa6.9□□□□□ -1.31
LRRC39-201ENST00000342895 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.31
LRRC39-201ENST00000342895 TLL1O43897 1013 aa6.89□□□□□ -1.31
LRRC39-201ENST00000342895 PPP1R18Q6NYC8 613 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms