RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 TPM2P07951 284 aa20.21■□□□□ 0.83
CDC42BPG-201ENST00000342711 REC8O95072 547 aa20.21■□□□□ 0.83
CDC42BPG-201ENST00000342711 GPS2Q13227 327 aa20.21■□□□□ 0.83
CDC42BPG-201ENST00000342711 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
CDC42BPG-201ENST00000342711 ANO2Q9NQ90 1003 aa20.2■□□□□ 0.82
CDC42BPG-201ENST00000342711 COG3Q96JB2 828 aa20.2■□□□□ 0.82
CDC42BPG-201ENST00000342711 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
CDC42BPG-201ENST00000342711 CHMP5Q9NZZ3 219 aa20.2■□□□□ 0.82
CDC42BPG-201ENST00000342711 USP47Q96K76 1375 aa20.19■□□□□ 0.82
CDC42BPG-201ENST00000342711 SYNE3Q6ZMZ3 975 aa20.19■□□□□ 0.82
CDC42BPG-201ENST00000342711 CCDC70Q6NSX1 233 aa20.19■□□□□ 0.82
CDC42BPG-201ENST00000342711 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
CDC42BPG-201ENST00000342711 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
CDC42BPG-201ENST00000342711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.18■□□□□ 0.82
CDC42BPG-201ENST00000342711 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
CDC42BPG-201ENST00000342711 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
CDC42BPG-201ENST00000342711 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
CDC42BPG-201ENST00000342711 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
CDC42BPG-201ENST00000342711 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
CDC42BPG-201ENST00000342711 NGEFQ8N5V2 710 aa20.16■□□□□ 0.82
CDC42BPG-201ENST00000342711 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
CDC42BPG-201ENST00000342711 TRIM29Q14134 588 aa20.15■□□□□ 0.82
CDC42BPG-201ENST00000342711 PCMTD1Q96MG8 357 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPG-201ENST00000342711 EVC2Q86UK5 1308 aa20.15■□□□□ 0.82
CDC42BPG-201ENST00000342711 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPG-201ENST00000342711 NECTIN2Q92692 538 aa20.14■□□□□ 0.82
CDC42BPG-201ENST00000342711 CPLX2Q6PUV4 134 aaKnown RBP20.14■□□□□ 0.81
CDC42BPG-201ENST00000342711 HOMER1Q86YM7 354 aa20.14■□□□□ 0.81
CDC42BPG-201ENST00000342711 PATL2C9JE40 543 aaKnown RBP20.14■□□□□ 0.81
CDC42BPG-201ENST00000342711 IFIT2P09913 472 aaKnown RBP20.14■□□□□ 0.81
CDC42BPG-201ENST00000342711 TEFQ10587 303 aa20.13■□□□□ 0.81
CDC42BPG-201ENST00000342711 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
CDC42BPG-201ENST00000342711 RIPK4P57078 832 aa20.12■□□□□ 0.81
CDC42BPG-201ENST00000342711 LRRFIP1Q32MZ4 808 aaKnown RBP20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 CPLX1O14810 134 aa20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 FBXW7Q969H0 707 aa20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 VPS37CA5D8V6 355 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 API5Q9BZZ5 524 aaKnown RBP20.11■□□□□ 0.81
CDC42BPG-201ENST00000342711 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
CDC42BPG-201ENST00000342711 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
CDC42BPG-201ENST00000342711 IPO7O95373 1038 aaKnown RBP20.1■□□□□ 0.81
CDC42BPG-201ENST00000342711 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
CDC42BPG-201ENST00000342711 MINK1Q8N4C8 1332 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPG-201ENST00000342711 APPP05067 770 aa20.1■□□□□ 0.81
CDC42BPG-201ENST00000342711 TEX35Q5T0J7 233 aa20.09■□□□□ 0.81
CDC42BPG-201ENST00000342711 INTS3Q68E01 1043 aaKnown RBP20.09■□□□□ 0.81
CDC42BPG-201ENST00000342711 SMC3Q9UQE7 1217 aa20.09■□□□□ 0.81
CDC42BPG-201ENST00000342711 ANKRD20A12PQ8NF67 263 aa20.08■□□□□ 0.81
CDC42BPG-201ENST00000342711 NUCB2P80303 420 aa20.08■□□□□ 0.8
CDC42BPG-201ENST00000342711 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.8
CDC42BPG-201ENST00000342711 C22orf23Q9BZE7 217 aa20.08■□□□□ 0.8
CDC42BPG-201ENST00000342711 RNF20Q5VTR2 975 aa20.07■□□□□ 0.8
CDC42BPG-201ENST00000342711 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
CDC42BPG-201ENST00000342711 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
CDC42BPG-201ENST00000342711 RAD21O60216 631 aa20.07■□□□□ 0.8
CDC42BPG-201ENST00000342711 FOSBP53539 338 aa20.07■□□□□ 0.8
CDC42BPG-201ENST00000342711 LNPKQ9C0E8 428 aa20.07■□□□□ 0.8
CDC42BPG-201ENST00000342711 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
CDC42BPG-201ENST00000342711 NFKBIBQ15653 356 aa20.06■□□□□ 0.8
CDC42BPG-201ENST00000342711 CCDC47Q96A33 483 aaKnown RBP20.06■□□□□ 0.8
CDC42BPG-201ENST00000342711 HOOK1Q9UJC3 728 aaKnown RBP20.06■□□□□ 0.8
CDC42BPG-201ENST00000342711 ROCK1Q13464 1354 aa20.05■□□□□ 0.8
CDC42BPG-201ENST00000342711 FKBP5Q13451 457 aaPredicted RBP20.05■□□□□ 0.8
CDC42BPG-201ENST00000342711 IFT57Q9NWB7 429 aa20.05■□□□□ 0.8
CDC42BPG-201ENST00000342711 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
CDC42BPG-201ENST00000342711 G3BP1Q13283 466 aaKnown RBP eCLIP20.04■□□□□ 0.8
CDC42BPG-201ENST00000342711 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
CDC42BPG-201ENST00000342711 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
CDC42BPG-201ENST00000342711 TRDNQ13061 729 aa20.03■□□□□ 0.8
CDC42BPG-201ENST00000342711 NOL10Q9BSC4 688 aaKnown RBP20.02■□□□□ 0.8
CDC42BPG-201ENST00000342711 BCL11BQ9C0K0 894 aaPredicted RBP20.02■□□□□ 0.8
CDC42BPG-201ENST00000342711 PANK1Q8TE04 598 aa20.02■□□□□ 0.79
CDC42BPG-201ENST00000342711 TCEAL9Q9UHQ7 104 aa20.01■□□□□ 0.79
CDC42BPG-201ENST00000342711 DHX16O60231 1041 aaKnown RBP20■□□□□ 0.79
CDC42BPG-201ENST00000342711 CCDC73Q6ZRK6 1079 aa20■□□□□ 0.79
CDC42BPG-201ENST00000342711 EVA1CP58658 441 aa20■□□□□ 0.79
CDC42BPG-201ENST00000342711 ABCF1Q8NE71 845 aaKnown RBP eCLIP20■□□□□ 0.79
CDC42BPG-201ENST00000342711 MNS1Q8NEH6 495 aa20■□□□□ 0.79
CDC42BPG-201ENST00000342711 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
CDC42BPG-201ENST00000342711 R3HCC1Q9Y3T6 440 aaKnown RBP19.99■□□□□ 0.79
CDC42BPG-201ENST00000342711 NASPP49321 788 aaPredicted RBP19.98■□□□□ 0.79
CDC42BPG-201ENST00000342711 TRIM34Q9BYJ4 488 aa19.98■□□□□ 0.79
CDC42BPG-201ENST00000342711 ARGLU1Q9NWB6 273 aaPredicted RBP19.98■□□□□ 0.79
CDC42BPG-201ENST00000342711 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 ERICH2A1L162 156 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 MRE11P49959 708 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 CCDC39Q9UFE4 941 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 ERC2O15083 957 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 CDC45O75419 566 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 TSPYL4Q9UJ04 414 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 GNAI1P63096 354 aa19.97■□□□□ 0.79
CDC42BPG-201ENST00000342711 VPS37DQ86XT2 251 aa19.96■□□□□ 0.79
CDC42BPG-201ENST00000342711 CCDC7Q96M83 1385 aa19.96■□□□□ 0.79
CDC42BPG-201ENST00000342711 NAP1L1P55209 391 aaKnown RBP19.96■□□□□ 0.79
CDC42BPG-201ENST00000342711 RUFY1Q96T51 708 aa19.96■□□□□ 0.79
CDC42BPG-201ENST00000342711 KIF7Q2M1P5 1343 aa19.96■□□□□ 0.79
CDC42BPG-201ENST00000342711 HMOX1P09601 288 aa19.96■□□□□ 0.79
CDC42BPG-201ENST00000342711 RNF214Q8ND24 703 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms