RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
PMS1-201ENST00000342075 ROCK2O75116 1388 aaKnown RBP19.72■□□□□ 0.75
PMS1-201ENST00000342075 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
PMS1-201ENST00000342075 UBR1Q8IWV7 1749 aa19.71■□□□□ 0.75
PMS1-201ENST00000342075 HSPA5P11021 654 aaKnown RBP19.71■□□□□ 0.75
PMS1-201ENST00000342075 CARD11Q9BXL7 1154 aa19.7■□□□□ 0.74
PMS1-201ENST00000342075 MYO3AQ8NEV4 1616 aa19.7■□□□□ 0.74
PMS1-201ENST00000342075 PTPRMP28827 1452 aa19.7■□□□□ 0.74
PMS1-201ENST00000342075 MYOM2P54296 1465 aa19.69■□□□□ 0.74
PMS1-201ENST00000342075 KDM4FA0A1W2PPD8 638 aa19.68■□□□□ 0.74
PMS1-201ENST00000342075 NRXN1Q9ULB1 1477 aa19.66■□□□□ 0.74
PMS1-201ENST00000342075 PIK3C2GO75747 1445 aa19.66■□□□□ 0.74
PMS1-201ENST00000342075 RIMS2Q9UQ26 1411 aa19.66■□□□□ 0.74
PMS1-201ENST00000342075 USP47Q96K76 1375 aa19.66■□□□□ 0.74
PMS1-201ENST00000342075 TMEM132EQ6IEE7 984 aa19.65■□□□□ 0.74
PMS1-201ENST00000342075 NLRP1Q9C000 1473 aa19.64■□□□□ 0.73
PMS1-201ENST00000342075 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
PMS1-201ENST00000342075 RPGRIP1LQ68CZ1 1315 aa19.64■□□□□ 0.73
PMS1-201ENST00000342075 ZFYVE9O95405 1425 aa19.63■□□□□ 0.73
PMS1-201ENST00000342075 VGFO15240 615 aaPredicted RBP19.62■□□□□ 0.73
PMS1-201ENST00000342075 LTKP29376 864 aa19.62■□□□□ 0.73
PMS1-201ENST00000342075 CEP170BQ9Y4F5 1589 aaPredicted RBP19.62■□□□□ 0.73
PMS1-201ENST00000342075 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
PMS1-201ENST00000342075 TMEM2Q9UHN6 1383 aa19.6■□□□□ 0.73
PMS1-201ENST00000342075 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
PMS1-201ENST00000342075 GPRASP1Q5JY77 1395 aa19.59■□□□□ 0.73
PMS1-201ENST00000342075 C14orf93Q9H972 538 aaKnown RBP19.57■□□□□ 0.72
PMS1-201ENST00000342075 SETD1BQ9UPS6 1966 aaKnown RBP19.57■□□□□ 0.72
PMS1-201ENST00000342075 KDM5AP29375 1690 aaKnown RBP19.57■□□□□ 0.72
PMS1-201ENST00000342075 ASXL1Q8IXJ9 1541 aa19.56■□□□□ 0.72
PMS1-201ENST00000342075 IQGAP1P46940 1657 aa19.56■□□□□ 0.72
PMS1-201ENST00000342075 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
PMS1-201ENST00000342075 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
PMS1-201ENST00000342075 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
PMS1-201ENST00000342075 ADGRB1O14514 1584 aa19.56■□□□□ 0.72
PMS1-201ENST00000342075 TXNDC2Q86VQ3 553 aa19.55■□□□□ 0.72
PMS1-201ENST00000342075 BCANQ96GW7 911 aa19.55■□□□□ 0.72
PMS1-201ENST00000342075 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
PMS1-201ENST00000342075 ALKQ9UM73 1620 aa19.54■□□□□ 0.72
PMS1-201ENST00000342075 STK26Q9P289 416 aa19.54■□□□□ 0.72
PMS1-201ENST00000342075 ZNF142P52746 1687 aaPredicted RBP19.53■□□□□ 0.72
PMS1-201ENST00000342075 LAMC1P11047 1609 aa19.53■□□□□ 0.72
PMS1-201ENST00000342075 WASHC2AQ641Q2 1341 aa19.52■□□□□ 0.72
PMS1-201ENST00000342075 THEMISQ8N1K5 641 aaPredicted RBP19.52■□□□□ 0.72
PMS1-201ENST00000342075 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
PMS1-201ENST00000342075 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
PMS1-201ENST00000342075 SLIT1O75093 1534 aa19.51■□□□□ 0.71
PMS1-201ENST00000342075 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
PMS1-201ENST00000342075 ARHGAP23Q9P227 1491 aa19.51■□□□□ 0.71
PMS1-201ENST00000342075 SCAF11Q99590 1463 aaKnown RBP19.5■□□□□ 0.71
PMS1-201ENST00000342075 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
PMS1-201ENST00000342075 METP08581 1390 aa19.49■□□□□ 0.71
PMS1-201ENST00000342075 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
PMS1-201ENST00000342075 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.49■□□□□ 0.71
PMS1-201ENST00000342075 HSPA2P54652 639 aa19.49■□□□□ 0.71
PMS1-201ENST00000342075 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
PMS1-201ENST00000342075 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
PMS1-201ENST00000342075 TESK2Q96S53 571 aa19.47■□□□□ 0.71
PMS1-201ENST00000342075 EID1Q9Y6B2 187 aa19.47■□□□□ 0.71
PMS1-201ENST00000342075 KIF7Q2M1P5 1343 aa19.47■□□□□ 0.71
PMS1-201ENST00000342075 ADAMTS13Q76LX8 1427 aa19.46■□□□□ 0.71
PMS1-201ENST00000342075 DISP3Q9P2K9 1392 aa19.45■□□□□ 0.7
PMS1-201ENST00000342075 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
PMS1-201ENST00000342075 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
PMS1-201ENST00000342075 YTHDC2Q9H6S0 1430 aaKnown RBP19.43■□□□□ 0.7
PMS1-201ENST00000342075 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
PMS1-201ENST00000342075 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
PMS1-201ENST00000342075 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
PMS1-201ENST00000342075 WAPLQ7Z5K2 1190 aa19.4■□□□□ 0.7
PMS1-201ENST00000342075 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
PMS1-201ENST00000342075 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
PMS1-201ENST00000342075 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
PMS1-201ENST00000342075 PLEKHH1Q9ULM0 1364 aa19.39■□□□□ 0.7
PMS1-201ENST00000342075 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
PMS1-201ENST00000342075 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
PMS1-201ENST00000342075 EIF3AQ14152 1382 aaKnown RBP19.38■□□□□ 0.69
PMS1-201ENST00000342075 PTPRUQ92729 1446 aa19.38■□□□□ 0.69
PMS1-201ENST00000342075 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
PMS1-201ENST00000342075 MED14O60244 1454 aa19.37■□□□□ 0.69
PMS1-201ENST00000342075 MINK1Q8N4C8 1332 aaPredicted RBP19.35■□□□□ 0.69
PMS1-201ENST00000342075 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
PMS1-201ENST00000342075 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.68
PMS1-201ENST00000342075 ROBO2Q9HCK4 1378 aa19.33■□□□□ 0.68
PMS1-201ENST00000342075 RBM33Q96EV2 1170 aaKnown RBP19.33■□□□□ 0.68
PMS1-201ENST00000342075 POGKQ9P215 609 aa19.33■□□□□ 0.68
PMS1-201ENST00000342075 TMF1P82094 1093 aa19.32■□□□□ 0.68
PMS1-201ENST00000342075 NPHP4O75161 1426 aaPredicted RBP19.32■□□□□ 0.68
PMS1-201ENST00000342075 MIER1Q8N108 512 aa19.31■□□□□ 0.68
PMS1-201ENST00000342075 AMOTL2Q9Y2J4 779 aa19.31■□□□□ 0.68
PMS1-201ENST00000342075 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
PMS1-201ENST00000342075 ABCC11Q96J66 1382 aa19.3■□□□□ 0.68
PMS1-201ENST00000342075 TULP4Q9NRJ4 1543 aa19.29■□□□□ 0.68
PMS1-201ENST00000342075 KCNA6P17658 529 aa19.28■□□□□ 0.68
PMS1-201ENST00000342075 CABP2Q9NPB3 220 aa19.27■□□□□ 0.68
PMS1-201ENST00000342075 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
PMS1-201ENST00000342075 STRCQ7RTU9 1775 aa19.26■□□□□ 0.67
PMS1-201ENST00000342075 CPS1P31327 1500 aa19.26■□□□□ 0.67
PMS1-201ENST00000342075 DIP2AQ14689 1571 aa19.26■□□□□ 0.67
PMS1-201ENST00000342075 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
PMS1-201ENST00000342075 MYOM1P52179 1685 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms