RNA–Protein interactions for RNA: ENST00000341772.4

DNER-201, Transcript of delta/notch like EGF repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNER, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNER-201ENST00000341772 PRAG1Q86YV5 1406 aa18.39■□□□□ 0.53
DNER-201ENST00000341772 PDZRN3Q9UPQ7 1066 aa18.38■□□□□ 0.53
DNER-201ENST00000341772 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
DNER-201ENST00000341772 E9PSI1 815 aa18.38■□□□□ 0.53
DNER-201ENST00000341772 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
DNER-201ENST00000341772 PCDHB15Q9Y5E8 787 aa18.37■□□□□ 0.53
DNER-201ENST00000341772 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
DNER-201ENST00000341772 MTHFSP49914 203 aa18.36■□□□□ 0.53
DNER-201ENST00000341772 MBD5Q9P267 1494 aa18.36■□□□□ 0.53
DNER-201ENST00000341772 APBB1O00213 710 aa18.36■□□□□ 0.53
DNER-201ENST00000341772 WWC1Q8IX03 1113 aa18.36■□□□□ 0.53
DNER-201ENST00000341772 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
DNER-201ENST00000341772 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
DNER-201ENST00000341772 SMC4Q9NTJ3 1288 aa18.35■□□□□ 0.53
DNER-201ENST00000341772 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
DNER-201ENST00000341772 SPAG9O60271 1321 aaKnown RBP18.34■□□□□ 0.53
DNER-201ENST00000341772 ATP10BO94823 1461 aa18.34■□□□□ 0.53
DNER-201ENST00000341772 WASHC2CQ9Y4E1 1318 aa18.33■□□□□ 0.53
DNER-201ENST00000341772 PANK2Q9BZ23 570 aa18.33■□□□□ 0.53
DNER-201ENST00000341772 FBLN1P23142 703 aa18.33■□□□□ 0.52
DNER-201ENST00000341772 KIAA0556O60303 1618 aa18.32■□□□□ 0.52
DNER-201ENST00000341772 ADGRF5Q8IZF2 1346 aa18.31■□□□□ 0.52
DNER-201ENST00000341772 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
DNER-201ENST00000341772 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 A2MP01023 1474 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 LNPKQ9C0E8 428 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 ARID3AQ99856 593 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
DNER-201ENST00000341772 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
DNER-201ENST00000341772 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
DNER-201ENST00000341772 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
DNER-201ENST00000341772 CABP2Q9NPB3 220 aa18.29■□□□□ 0.52
DNER-201ENST00000341772 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
DNER-201ENST00000341772 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
DNER-201ENST00000341772 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
DNER-201ENST00000341772 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
DNER-201ENST00000341772 FAM135AQ9P2D6 1515 aa18.27■□□□□ 0.52
DNER-201ENST00000341772 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
DNER-201ENST00000341772 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
DNER-201ENST00000341772 CFAP53Q96M91 514 aa18.26■□□□□ 0.51
DNER-201ENST00000341772 EXOSC9Q06265 439 aaKnown RBP18.25■□□□□ 0.51
DNER-201ENST00000341772 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
DNER-201ENST00000341772 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
DNER-201ENST00000341772 SOX12O15370 315 aa18.24■□□□□ 0.51
DNER-201ENST00000341772 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
DNER-201ENST00000341772 FOXD4L5Q5VV16 416 aaPredicted RBP18.23■□□□□ 0.51
DNER-201ENST00000341772 FOXD4L4Q8WXT5 416 aaPredicted RBP18.23■□□□□ 0.51
DNER-201ENST00000341772 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
DNER-201ENST00000341772 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
DNER-201ENST00000341772 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
DNER-201ENST00000341772 RRAGDQ9NQL2 400 aaPredicted RBP18.23■□□□□ 0.51
DNER-201ENST00000341772 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
DNER-201ENST00000341772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.22■□□□□ 0.51
DNER-201ENST00000341772 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
DNER-201ENST00000341772 THUMPD2Q9BTF0 503 aaKnown RBP18.22■□□□□ 0.51
DNER-201ENST00000341772 COL17A1Q9UMD9 1497 aaPredicted RBP18.22■□□□□ 0.51
DNER-201ENST00000341772 IFT140Q96RY7 1462 aa18.22■□□□□ 0.51
DNER-201ENST00000341772 CCDC141Q6ZP82 1450 aa18.21■□□□□ 0.51
DNER-201ENST00000341772 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
DNER-201ENST00000341772 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
DNER-201ENST00000341772 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
DNER-201ENST00000341772 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
DNER-201ENST00000341772 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
DNER-201ENST00000341772 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
DNER-201ENST00000341772 USP19O94966 1318 aa18.2■□□□□ 0.5
DNER-201ENST00000341772 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
DNER-201ENST00000341772 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
DNER-201ENST00000341772 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
DNER-201ENST00000341772 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
DNER-201ENST00000341772 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
DNER-201ENST00000341772 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
DNER-201ENST00000341772 HMOX1P09601 288 aa18.18■□□□□ 0.5
DNER-201ENST00000341772 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
DNER-201ENST00000341772 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
DNER-201ENST00000341772 TRAK2O60296 914 aa18.17■□□□□ 0.5
DNER-201ENST00000341772 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
DNER-201ENST00000341772 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
DNER-201ENST00000341772 ADGRL2O95490 1459 aa18.17■□□□□ 0.5
DNER-201ENST00000341772 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
DNER-201ENST00000341772 FOXD4L6Q3SYB3 417 aaPredicted RBP18.17■□□□□ 0.5
DNER-201ENST00000341772 FOXD4L3Q6VB84 417 aaPredicted RBP18.17■□□□□ 0.5
DNER-201ENST00000341772 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
DNER-201ENST00000341772 ZMYM4Q5VZL5 1548 aa18.16■□□□□ 0.5
DNER-201ENST00000341772 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
DNER-201ENST00000341772 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
DNER-201ENST00000341772 RIPK4P57078 832 aa18.15■□□□□ 0.5
DNER-201ENST00000341772 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
DNER-201ENST00000341772 NSD3Q9BZ95 1437 aa18.14■□□□□ 0.5
DNER-201ENST00000341772 L1TD1Q5T7N2 865 aaKnown RBP18.14■□□□□ 0.49
DNER-201ENST00000341772 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
DNER-201ENST00000341772 MCM4P33991 863 aa18.13■□□□□ 0.49
DNER-201ENST00000341772 NOL8Q76FK4 1167 aaKnown RBP18.13■□□□□ 0.49
DNER-201ENST00000341772 ARHGEF12Q9NZN5 1544 aa18.13■□□□□ 0.49
DNER-201ENST00000341772 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
DNER-201ENST00000341772 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
DNER-201ENST00000341772 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
DNER-201ENST00000341772 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms