RNA–Protein interactions for RNA: ENST00000341757.9

SCIN-202, Transcript of scinderin, humanhuman

TSL 1 (best)

Gene SCIN, Length 2,569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIN-202ENST00000341757 PDLIM2Q96JY6 352 aa16.08■□□□□ 0.16
SCIN-202ENST00000341757 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
SCIN-202ENST00000341757 NCOA3Q9Y6Q9 1424 aa16.06■□□□□ 0.16
SCIN-202ENST00000341757 TSC1Q92574 1164 aa16.06■□□□□ 0.16
SCIN-202ENST00000341757 IGSF3O75054 1194 aa16.06■□□□□ 0.16
SCIN-202ENST00000341757 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
SCIN-202ENST00000341757 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
SCIN-202ENST00000341757 E9PCH4 1651 aa16.05■□□□□ 0.16
SCIN-202ENST00000341757 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
SCIN-202ENST00000341757 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
SCIN-202ENST00000341757 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
SCIN-202ENST00000341757 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
SCIN-202ENST00000341757 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
SCIN-202ENST00000341757 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
SCIN-202ENST00000341757 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
SCIN-202ENST00000341757 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 MFAP1P55081 439 aaKnown RBP16.03■□□□□ 0.16
SCIN-202ENST00000341757 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 CGNL1Q0VF96 1302 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 ZNF771Q7L3S4 317 aaPredicted RBP16.03■□□□□ 0.16
SCIN-202ENST00000341757 DDX49Q9Y6V7 483 aaKnown RBP16.03■□□□□ 0.16
SCIN-202ENST00000341757 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 KIF14Q15058 1648 aa16.03■□□□□ 0.16
SCIN-202ENST00000341757 BCAR3O75815 825 aa16.02■□□□□ 0.16
SCIN-202ENST00000341757 KLHL40Q2TBA0 621 aa16.02■□□□□ 0.16
SCIN-202ENST00000341757 VGFO15240 615 aaPredicted RBP16.02■□□□□ 0.15
SCIN-202ENST00000341757 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
SCIN-202ENST00000341757 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
SCIN-202ENST00000341757 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
SCIN-202ENST00000341757 ZNF445P59923 1031 aa16.01■□□□□ 0.15
SCIN-202ENST00000341757 SMC5Q8IY18 1101 aa16.01■□□□□ 0.15
SCIN-202ENST00000341757 GOLGA6L22H0YM25 854 aa16■□□□□ 0.15
SCIN-202ENST00000341757 IRX3P78415 501 aaPredicted RBP16■□□□□ 0.15
SCIN-202ENST00000341757 RBSNQ9H1K0 784 aa16■□□□□ 0.15
SCIN-202ENST00000341757 E9PSI1 815 aa16■□□□□ 0.15
SCIN-202ENST00000341757 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
SCIN-202ENST00000341757 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
SCIN-202ENST00000341757 CHRM1P11229 460 aaPredicted RBP15.99■□□□□ 0.15
SCIN-202ENST00000341757 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
SCIN-202ENST00000341757 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
SCIN-202ENST00000341757 PRIMPOLQ96LW4 560 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 GTF2F1P35269 517 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCIN-202ENST00000341757 KCNJ4P48050 445 aa15.99■□□□□ 0.15
SCIN-202ENST00000341757 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
SCIN-202ENST00000341757 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
SCIN-202ENST00000341757 ZNF521Q96K83 1311 aa15.98■□□□□ 0.15
SCIN-202ENST00000341757 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
SCIN-202ENST00000341757 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
SCIN-202ENST00000341757 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
SCIN-202ENST00000341757 CFTRP13569 1480 aa15.97■□□□□ 0.15
SCIN-202ENST00000341757 SLC20A2Q08357 652 aa15.97■□□□□ 0.15
SCIN-202ENST00000341757 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
SCIN-202ENST00000341757 PDCL2Q8N4E4 241 aa15.97■□□□□ 0.15
SCIN-202ENST00000341757 DNAJC2Q99543 621 aaKnown RBP15.97■□□□□ 0.15
SCIN-202ENST00000341757 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
SCIN-202ENST00000341757 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
SCIN-202ENST00000341757 FAM177BA6PVY3 158 aa15.96■□□□□ 0.15
SCIN-202ENST00000341757 PMFBP1Q8TBY8 1022 aa15.96■□□□□ 0.15
SCIN-202ENST00000341757 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
SCIN-202ENST00000341757 PDE3AQ14432 1141 aa15.96■□□□□ 0.15
SCIN-202ENST00000341757 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
SCIN-202ENST00000341757 ZSCAN23Q3MJ62 389 aa15.95■□□□□ 0.14
SCIN-202ENST00000341757 RGS22Q8NE09 1264 aa15.95■□□□□ 0.14
SCIN-202ENST00000341757 SNX21Q969T3 373 aa15.95■□□□□ 0.14
SCIN-202ENST00000341757 KIF3AQ9Y496 699 aa15.95■□□□□ 0.14
SCIN-202ENST00000341757 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
SCIN-202ENST00000341757 CAVIN1Q6NZI2 390 aaKnown RBP15.94■□□□□ 0.14
SCIN-202ENST00000341757 PANK1Q8TE04 598 aa15.94■□□□□ 0.14
SCIN-202ENST00000341757 SSFA2P28290 1259 aa15.94■□□□□ 0.14
SCIN-202ENST00000341757 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCIN-202ENST00000341757 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
SCIN-202ENST00000341757 BCL2L12Q9HB09 334 aa15.93■□□□□ 0.14
SCIN-202ENST00000341757 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
SCIN-202ENST00000341757 NKTRP30414 1462 aaKnown RBP15.93■□□□□ 0.14
SCIN-202ENST00000341757 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
SCIN-202ENST00000341757 BRD2P25440 801 aaKnown RBP15.92■□□□□ 0.14
SCIN-202ENST00000341757 TRMT2AQ8IZ69 625 aaKnown RBP15.92■□□□□ 0.14
SCIN-202ENST00000341757 TCOF1Q13428 1488 aaKnown RBP15.92■□□□□ 0.14
SCIN-202ENST00000341757 CERS3Q8IU89 383 aa15.92■□□□□ 0.14
SCIN-202ENST00000341757 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
SCIN-202ENST00000341757 BAG4O95429 457 aaKnown RBP15.91■□□□□ 0.14
SCIN-202ENST00000341757 PTMAP06454 111 aaKnown RBP15.9■□□□□ 0.14
SCIN-202ENST00000341757 CLEC17AQ6ZS10 378 aa15.9■□□□□ 0.14
SCIN-202ENST00000341757 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
SCIN-202ENST00000341757 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
SCIN-202ENST00000341757 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
SCIN-202ENST00000341757 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
SCIN-202ENST00000341757 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCIN-202ENST00000341757 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
SCIN-202ENST00000341757 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
SCIN-202ENST00000341757 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
SCIN-202ENST00000341757 GABPB1Q06547 395 aaPredicted RBP15.88■□□□□ 0.13
SCIN-202ENST00000341757 FEZ1Q99689 392 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms