RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 GPRASP1Q5JY77 1395 aa9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 CENPQQ7L2Z9 268 aaPredicted RBP9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 SLC4A10Q6U841 1118 aa9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 THEMISQ8N1K5 641 aaPredicted RBP9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 RAPGEF4Q8WZA2 1011 aa9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 DDX19BQ9UMR2 479 aa9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 GNAI1P63096 354 aa9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 DNAJC5BQ9UF47 199 aa9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 SMG6Q86US8 1419 aaKnown RBP9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 ARHGAP5Q13017 1502 aa9.52□□□□□ -0.89
ATP2B4-201ENST00000341360 RPGRIP1LQ68CZ1 1315 aa9.51□□□□□ -0.89
ATP2B4-201ENST00000341360 MEX3CQ5U5Q3 659 aaKnown RBP9.51□□□□□ -0.89
ATP2B4-201ENST00000341360 DRC7Q8IY82 874 aa9.51□□□□□ -0.89
ATP2B4-201ENST00000341360 CLSTN1O94985 981 aa9.51□□□□□ -0.89
ATP2B4-201ENST00000341360 SYNE3Q6ZMZ3 975 aa9.51□□□□□ -0.89
ATP2B4-201ENST00000341360 PRG4Q92954 1404 aaPredicted RBP9.51□□□□□ -0.89
ATP2B4-201ENST00000341360 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 LTV1Q96GA3 475 aaPredicted RBP9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 APBB1O00213 710 aa9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 REC8O95072 547 aa9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 AKAP17AQ02040 695 aaKnown RBP9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 PCF11O94913 1555 aaKnown RBP9.5□□□□□ -0.89
ATP2B4-201ENST00000341360 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
ATP2B4-201ENST00000341360 SUPT6HQ7KZ85 1726 aaKnown RBP9.49□□□□□ -0.89
ATP2B4-201ENST00000341360 MSH5O43196 834 aa9.49□□□□□ -0.89
ATP2B4-201ENST00000341360 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
ATP2B4-201ENST00000341360 NAIPQ13075 1403 aa9.49□□□□□ -0.89
ATP2B4-201ENST00000341360 KIF7Q2M1P5 1343 aa9.48□□□□□ -0.89
ATP2B4-201ENST00000341360 RRP1P56182 461 aaKnown RBP9.48□□□□□ -0.89
ATP2B4-201ENST00000341360 C9orf78Q9NZ63 289 aaPredicted RBP9.48□□□□□ -0.89
ATP2B4-201ENST00000341360 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
ATP2B4-201ENST00000341360 RASSF8Q8NHQ8 419 aa9.48□□□□□ -0.89
ATP2B4-201ENST00000341360 ZNF692Q9BU19 519 aaPredicted RBP9.48□□□□□ -0.89
ATP2B4-201ENST00000341360 ZKSCAN1P17029 563 aaPredicted RBP9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 PDE4AP27815 886 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 MARCH6O60337 910 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 HECW1Q76N89 1606 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 CFAP43Q8NDM7 1665 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 DNMBPQ6XZF7 1577 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 CCDC47Q96A33 483 aaKnown RBP9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 PRDM2Q13029 1718 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 ANKRD30BQ9BXX2 1392 aa9.47□□□□□ -0.89
ATP2B4-201ENST00000341360 CUL7Q14999 1698 aa9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 TRIM34Q9BYJ4 488 aa9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 DIAPH3Q9NSV4 1193 aa9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 TOPBP1Q92547 1522 aa9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 AKNAQ7Z591 1439 aa9.46□□□□□ -0.89
ATP2B4-201ENST00000341360 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 SF3A1Q15459 793 aaKnown RBP9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 KIAA0586Q9BVV6 1533 aa9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 ERC2O15083 957 aa9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 CEP89Q96ST8 783 aa9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 TOMM22Q9NS69 142 aa9.46□□□□□ -0.9
ATP2B4-201ENST00000341360 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
ATP2B4-201ENST00000341360 DAPK1P53355 1430 aa9.45□□□□□ -0.9
ATP2B4-201ENST00000341360 SKOR2Q2VWA4 1001 aaPredicted RBP9.45□□□□□ -0.9
ATP2B4-201ENST00000341360 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
ATP2B4-201ENST00000341360 G3BP1Q13283 466 aaKnown RBP eCLIP9.45□□□□□ -0.9
ATP2B4-201ENST00000341360 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
ATP2B4-201ENST00000341360 LAMC3Q9Y6N6 1575 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 TPM2P07951 284 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 TRDNQ13061 729 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 NUTM2FA1L443 756 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 IFIT2P09913 472 aaKnown RBP9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 CTDP1Q9Y5B0 961 aaPredicted RBP9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 NCOA1Q15788 1441 aa9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
ATP2B4-201ENST00000341360 TPM3P06753 285 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 PLEKHO1Q53GL0 409 aaPredicted RBP9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 HOOK1Q9UJC3 728 aaKnown RBP9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 RIPK4P57078 832 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 TRIM29Q14134 588 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 DZIP1LQ8IYY4 767 aaKnown RBP9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 CLUAP1Q96AJ1 413 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 TXNDC2Q86VQ3 553 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 NAP1L5Q96NT1 182 aaPredicted RBP9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 PPP6R1Q9UPN7 881 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 C9orf84Q5VXU9 1444 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 ABCA10Q8WWZ4 1543 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 TPM1P09493 284 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 GSE1Q14687 1217 aa9.43□□□□□ -0.9
ATP2B4-201ENST00000341360 ATAD2Q6PL18 1390 aa9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 H3BQV1 296 aa9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 GNAI3P08754 354 aa9.42□□□□□ -0.9
ATP2B4-201ENST00000341360 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms