RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CFAP70Q5T0N1 1121 aa27.04■■□□□ 1.92
SPG7-202ENST00000341316 CFAP74Q9C0B2 1584 aa27.04■■□□□ 1.92
SPG7-202ENST00000341316 MAP3K4Q9Y6R4 1608 aa27.03■■□□□ 1.92
SPG7-202ENST00000341316 MYOM2P54296 1465 aa27.02■■□□□ 1.92
SPG7-202ENST00000341316 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
SPG7-202ENST00000341316 KIAA1210Q9ULL0 1709 aa27.02■■□□□ 1.92
SPG7-202ENST00000341316 B4GALNT3Q6L9W6 998 aa27.01■■□□□ 1.91
SPG7-202ENST00000341316 ABCA6Q8N139 1617 aa27■■□□□ 1.91
SPG7-202ENST00000341316 KIF1BO60333 1816 aa27■■□□□ 1.91
SPG7-202ENST00000341316 HECW2Q9P2P5 1572 aa26.99■■□□□ 1.91
SPG7-202ENST00000341316 FANCIQ9NVI1 1328 aa26.99■■□□□ 1.91
SPG7-202ENST00000341316 GGT6Q6P531 493 aa26.99■■□□□ 1.91
SPG7-202ENST00000341316 IFT172Q9UG01 1749 aa26.98■■□□□ 1.91
SPG7-202ENST00000341316 SALL2Q9Y467 1007 aaPredicted RBP26.97■■□□□ 1.91
SPG7-202ENST00000341316 NPATQ14207 1427 aa26.97■■□□□ 1.91
SPG7-202ENST00000341316 RAPGEF3O95398 923 aa26.96■■□□□ 1.91
SPG7-202ENST00000341316 EIF3AQ14152 1382 aaKnown RBP26.96■■□□□ 1.91
SPG7-202ENST00000341316 SYNMO15061 1565 aa26.95■■□□□ 1.9
SPG7-202ENST00000341316 CDCA8Q53HL2 280 aa26.95■■□□□ 1.9
SPG7-202ENST00000341316 AMER1Q5JTC6 1135 aaPredicted RBP26.95■■□□□ 1.9
SPG7-202ENST00000341316 ADGRB3O60242 1522 aa26.94■■□□□ 1.9
SPG7-202ENST00000341316 NRXN1Q9ULB1 1477 aa26.94■■□□□ 1.9
SPG7-202ENST00000341316 KNSTRNQ9Y448 316 aa26.93■■□□□ 1.9
SPG7-202ENST00000341316 MYOM1P52179 1685 aa26.93■■□□□ 1.9
SPG7-202ENST00000341316 NOS1P29475 1434 aa26.91■■□□□ 1.9
SPG7-202ENST00000341316 CHGAP10645 457 aaKnown RBP26.91■■□□□ 1.9
SPG7-202ENST00000341316 BLMP54132 1417 aaPredicted RBP26.9■■□□□ 1.9
SPG7-202ENST00000341316 NEO1Q92859 1461 aa26.9■■□□□ 1.9
SPG7-202ENST00000341316 CFAP65Q6ZU64 1925 aaKnown RBP26.89■■□□□ 1.9
SPG7-202ENST00000341316 ABCC3O15438 1527 aa26.89■■□□□ 1.89
SPG7-202ENST00000341316 ERVK-7P63135 1459 aa26.88■■□□□ 1.89
SPG7-202ENST00000341316 PPP2R1AP30153 589 aa26.88■■□□□ 1.89
SPG7-202ENST00000341316 INSRP06213 1382 aa26.86■■□□□ 1.89
SPG7-202ENST00000341316 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
SPG7-202ENST00000341316 ASXL1Q8IXJ9 1541 aa26.85■■□□□ 1.89
SPG7-202ENST00000341316 CDCA7LQ96GN5 454 aa26.85■■□□□ 1.89
SPG7-202ENST00000341316 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
SPG7-202ENST00000341316 PDE3BQ13370 1112 aa26.83■■□□□ 1.89
SPG7-202ENST00000341316 ADAMTS8Q9UP79 889 aa26.83■■□□□ 1.89
SPG7-202ENST00000341316 DIP2CQ9Y2E4 1556 aa26.83■■□□□ 1.89
SPG7-202ENST00000341316 CYB5RLQ6IPT4 315 aa26.81■■□□□ 1.88
SPG7-202ENST00000341316 PIK3C2GO75747 1445 aa26.81■■□□□ 1.88
SPG7-202ENST00000341316 PPLO60437 1756 aa26.8■■□□□ 1.88
SPG7-202ENST00000341316 SIGLEC1Q9BZZ2 1709 aa26.8■■□□□ 1.88
SPG7-202ENST00000341316 CAMSAP1Q5T5Y3 1602 aa26.8■■□□□ 1.88
SPG7-202ENST00000341316 RCAN3Q9UKA8 241 aa26.79■■□□□ 1.88
SPG7-202ENST00000341316 MYO3AQ8NEV4 1616 aa26.79■■□□□ 1.88
SPG7-202ENST00000341316 SETBP1Q9Y6X0 1596 aa26.79■■□□□ 1.88
SPG7-202ENST00000341316 NPC1L1Q9UHC9 1359 aa26.78■■□□□ 1.88
SPG7-202ENST00000341316 RRP1P56182 461 aaKnown RBP26.78■■□□□ 1.88
SPG7-202ENST00000341316 C14orf93Q9H972 538 aaKnown RBP26.78■■□□□ 1.88
SPG7-202ENST00000341316 RICTORQ6R327 1708 aa26.77■■□□□ 1.88
SPG7-202ENST00000341316 ERICH6Q7L0X2 663 aa26.77■■□□□ 1.88
SPG7-202ENST00000341316 CARD14Q9BXL6 1004 aa26.77■■□□□ 1.88
SPG7-202ENST00000341316 SLC24A1O60721 1099 aa26.76■■□□□ 1.87
SPG7-202ENST00000341316 TRAK1Q9UPV9 953 aa26.76■■□□□ 1.87
SPG7-202ENST00000341316 YEATS2Q9ULM3 1422 aa26.76■■□□□ 1.87
SPG7-202ENST00000341316 SBNO2Q9Y2G9 1366 aa26.75■■□□□ 1.87
SPG7-202ENST00000341316 ADGRB1O14514 1584 aa26.75■■□□□ 1.87
SPG7-202ENST00000341316 CENPJQ9HC77 1338 aaPredicted RBP26.75■■□□□ 1.87
SPG7-202ENST00000341316 TMEM132EQ6IEE7 984 aa26.74■■□□□ 1.87
SPG7-202ENST00000341316 CCDC136Q96JN2 1154 aa26.74■■□□□ 1.87
SPG7-202ENST00000341316 RPGRIP1LQ68CZ1 1315 aa26.73■■□□□ 1.87
SPG7-202ENST00000341316 PIK3C2BO00750 1634 aa26.71■■□□□ 1.87
SPG7-202ENST00000341316 NUTM2DQ5VT03 806 aaPredicted RBP26.71■■□□□ 1.87
SPG7-202ENST00000341316 WDR43Q15061 677 aaKnown RBP eCLIP26.7■■□□□ 1.87
SPG7-202ENST00000341316 PLEKHH1Q9ULM0 1364 aa26.68■■□□□ 1.86
SPG7-202ENST00000341316 ARHGAP31Q2M1Z3 1444 aa26.67■■□□□ 1.86
SPG7-202ENST00000341316 EXOC6Q8TAG9 804 aa26.67■■□□□ 1.86
SPG7-202ENST00000341316 ZC3H13Q5T200 1668 aaKnown RBP26.66■■□□□ 1.86
SPG7-202ENST00000341316 NEXMIFQ5QGS0 1516 aa26.66■■□□□ 1.86
SPG7-202ENST00000341316 IDI1Q13907 227 aa26.65■■□□□ 1.86
SPG7-202ENST00000341316 QRICH2Q9H0J4 1663 aa26.65■■□□□ 1.86
SPG7-202ENST00000341316 BCL11AQ9H165 835 aa26.65■■□□□ 1.86
SPG7-202ENST00000341316 GLI2P10070 1586 aa26.64■■□□□ 1.85
SPG7-202ENST00000341316 SLC12A5Q9H2X9 1139 aa26.62■■□□□ 1.85
SPG7-202ENST00000341316 ZNF521Q96K83 1311 aa26.61■■□□□ 1.85
SPG7-202ENST00000341316 VGFO15240 615 aaPredicted RBP26.6■■□□□ 1.85
SPG7-202ENST00000341316 PLIN1O60240 522 aa26.6■■□□□ 1.85
SPG7-202ENST00000341316 CCDC146Q8IYE0 955 aa26.59■■□□□ 1.85
SPG7-202ENST00000341316 FAM69CQ0P6D2 419 aa26.59■■□□□ 1.85
SPG7-202ENST00000341316 SENP3Q9H4L4 574 aaPredicted RBP26.59■■□□□ 1.85
SPG7-202ENST00000341316 NSD3Q9BZ95 1437 aa26.58■■□□□ 1.85
SPG7-202ENST00000341316 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
SPG7-202ENST00000341316 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
SPG7-202ENST00000341316 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
SPG7-202ENST00000341316 DUSP27Q5VZP5 1158 aa26.55■■□□□ 1.84
SPG7-202ENST00000341316 SLC52A1Q9NWF4 448 aa26.55■■□□□ 1.84
SPG7-202ENST00000341316 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
SPG7-202ENST00000341316 PREX1Q8TCU6 1659 aa26.52■■□□□ 1.84
SPG7-202ENST00000341316 DIP2BQ9P265 1576 aa26.52■■□□□ 1.84
SPG7-202ENST00000341316 TULP4Q9NRJ4 1543 aa26.52■■□□□ 1.84
SPG7-202ENST00000341316 FBXO31Q5XUX0 539 aaPredicted RBP26.51■■□□□ 1.84
SPG7-202ENST00000341316 APAF1O14727 1248 aa26.51■■□□□ 1.83
SPG7-202ENST00000341316 GOLGA2Q08379 1002 aa26.51■■□□□ 1.83
SPG7-202ENST00000341316 MYO5BQ9ULV0 1848 aa26.5■■□□□ 1.83
SPG7-202ENST00000341316 ZFYVE9O95405 1425 aa26.5■■□□□ 1.83
SPG7-202ENST00000341316 TMEM131LA2VDJ0 1609 aa26.49■■□□□ 1.83
SPG7-202ENST00000341316 MORC1Q86VD1 984 aa26.48■■□□□ 1.83
SPG7-202ENST00000341316 TSPOAP1O95153 1857 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms