RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
DNMT1-201ENST00000340748 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
DNMT1-201ENST00000340748 ADAMTS2O95450 1211 aa16.11■□□□□ 0.17
DNMT1-201ENST00000340748 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-201ENST00000340748 USP47Q96K76 1375 aa16.11■□□□□ 0.17
DNMT1-201ENST00000340748 GBP4Q96PP9 640 aa16.1■□□□□ 0.17
DNMT1-201ENST00000340748 PEG3Q9GZU2 1588 aa16.1■□□□□ 0.17
DNMT1-201ENST00000340748 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
DNMT1-201ENST00000340748 C9orf84Q5VXU9 1444 aa16.1■□□□□ 0.17
DNMT1-201ENST00000340748 CUL7Q14999 1698 aa16.1■□□□□ 0.17
DNMT1-201ENST00000340748 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
DNMT1-201ENST00000340748 HDAC5Q9UQL6 1122 aa16.1■□□□□ 0.17
DNMT1-201ENST00000340748 TEFQ10587 303 aa16.09■□□□□ 0.17
DNMT1-201ENST00000340748 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
DNMT1-201ENST00000340748 PANK3Q9H999 370 aa16.09■□□□□ 0.17
DNMT1-201ENST00000340748 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
DNMT1-201ENST00000340748 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
DNMT1-201ENST00000340748 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.17
DNMT1-201ENST00000340748 HMMRO75330 724 aa16.08■□□□□ 0.16
DNMT1-201ENST00000340748 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
DNMT1-201ENST00000340748 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
DNMT1-201ENST00000340748 SPRYD3Q8NCJ5 442 aa16.07■□□□□ 0.16
DNMT1-201ENST00000340748 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
DNMT1-201ENST00000340748 FANCAO15360 1455 aa16.07■□□□□ 0.16
DNMT1-201ENST00000340748 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
DNMT1-201ENST00000340748 ZBED9Q6R2W3 1325 aa16.07■□□□□ 0.16
DNMT1-201ENST00000340748 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
DNMT1-201ENST00000340748 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
DNMT1-201ENST00000340748 APBB1O00213 710 aa16.06■□□□□ 0.16
DNMT1-201ENST00000340748 LRRC9Q6ZRR7 1453 aa16.06■□□□□ 0.16
DNMT1-201ENST00000340748 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
DNMT1-201ENST00000340748 PRAM1Q96QH2 718 aa16.05■□□□□ 0.16
DNMT1-201ENST00000340748 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
DNMT1-201ENST00000340748 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-201ENST00000340748 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
DNMT1-201ENST00000340748 FRAT2O75474 233 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-201ENST00000340748 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
DNMT1-201ENST00000340748 RBM33Q96EV2 1170 aaKnown RBP16.04■□□□□ 0.16
DNMT1-201ENST00000340748 MSNP26038 577 aaKnown RBP16.03■□□□□ 0.16
DNMT1-201ENST00000340748 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
DNMT1-201ENST00000340748 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
DNMT1-201ENST00000340748 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.16
DNMT1-201ENST00000340748 E9PSI1 815 aa16.02■□□□□ 0.16
DNMT1-201ENST00000340748 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-201ENST00000340748 GORABQ5T7V8 394 aa16.02■□□□□ 0.15
DNMT1-201ENST00000340748 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.15
DNMT1-201ENST00000340748 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.15
DNMT1-201ENST00000340748 PRXQ9BXM0 1461 aa16.01■□□□□ 0.15
DNMT1-201ENST00000340748 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-201ENST00000340748 RRBP1Q9P2E9 1410 aaKnown RBP16.01■□□□□ 0.15
DNMT1-201ENST00000340748 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-201ENST00000340748 MFAP1P55081 439 aaKnown RBP16.01■□□□□ 0.15
DNMT1-201ENST00000340748 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
DNMT1-201ENST00000340748 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
DNMT1-201ENST00000340748 WDR62O43379 1518 aa16■□□□□ 0.15
DNMT1-201ENST00000340748 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
DNMT1-201ENST00000340748 HTATSF1O43719 755 aaKnown RBP15.99■□□□□ 0.15
DNMT1-201ENST00000340748 CLUAP1Q96AJ1 413 aa15.99■□□□□ 0.15
DNMT1-201ENST00000340748 KIF14Q15058 1648 aa15.98■□□□□ 0.15
DNMT1-201ENST00000340748 RRP1P56182 461 aaKnown RBP15.98■□□□□ 0.15
DNMT1-201ENST00000340748 SYAP1Q96A49 352 aaPredicted RBP15.98■□□□□ 0.15
DNMT1-201ENST00000340748 SLKQ9H2G2 1235 aaPredicted RBP15.97■□□□□ 0.15
DNMT1-201ENST00000340748 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
DNMT1-201ENST00000340748 GNL2Q13823 731 aaKnown RBP15.97■□□□□ 0.15
DNMT1-201ENST00000340748 DDX54Q8TDD1 881 aaKnown RBP15.97■□□□□ 0.15
DNMT1-201ENST00000340748 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
DNMT1-201ENST00000340748 TNRQ92752 1358 aa15.96■□□□□ 0.15
DNMT1-201ENST00000340748 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.15
DNMT1-201ENST00000340748 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.14
DNMT1-201ENST00000340748 MSH6P52701 1360 aa15.95■□□□□ 0.14
DNMT1-201ENST00000340748 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
DNMT1-201ENST00000340748 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
DNMT1-201ENST00000340748 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
DNMT1-201ENST00000340748 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
DNMT1-201ENST00000340748 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
DNMT1-201ENST00000340748 FBXW7Q969H0 707 aa15.94■□□□□ 0.14
DNMT1-201ENST00000340748 TRIM6-TRIM34B2RNG4 842 aa15.94■□□□□ 0.14
DNMT1-201ENST00000340748 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
DNMT1-201ENST00000340748 SLC4A10Q6U841 1118 aa15.94■□□□□ 0.14
DNMT1-201ENST00000340748 RRP7AQ9Y3A4 280 aaKnown RBP15.94■□□□□ 0.14
DNMT1-201ENST00000340748 CCDC141Q6ZP82 1450 aa15.94■□□□□ 0.14
DNMT1-201ENST00000340748 TATP17735 454 aaPredicted RBP15.93■□□□□ 0.14
DNMT1-201ENST00000340748 RPGRIP1LQ68CZ1 1315 aa15.93■□□□□ 0.14
DNMT1-201ENST00000340748 CADPS2Q86UW7 1296 aa15.93■□□□□ 0.14
DNMT1-201ENST00000340748 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
DNMT1-201ENST00000340748 ZC3H6P61129 1189 aaKnown RBP15.93■□□□□ 0.14
DNMT1-201ENST00000340748 CDK19Q9BWU1 502 aa15.93■□□□□ 0.14
DNMT1-201ENST00000340748 ERBINQ96RT1 1412 aa15.93■□□□□ 0.14
DNMT1-201ENST00000340748 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
DNMT1-201ENST00000340748 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
DNMT1-201ENST00000340748 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
DNMT1-201ENST00000340748 CSPP1Q1MSJ5 1256 aa15.92■□□□□ 0.14
DNMT1-201ENST00000340748 SMG6Q86US8 1419 aaKnown RBP15.91■□□□□ 0.14
DNMT1-201ENST00000340748 FAM135AQ9P2D6 1515 aa15.91■□□□□ 0.14
DNMT1-201ENST00000340748 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
DNMT1-201ENST00000340748 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
DNMT1-201ENST00000340748 DIAPH1O60610 1272 aaKnown RBP15.9■□□□□ 0.14
DNMT1-201ENST00000340748 ST18O60284 1047 aa15.9■□□□□ 0.14
DNMT1-201ENST00000340748 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
DNMT1-201ENST00000340748 GOLGA6L3A6NEY3 463 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1311.4 ms