RNA–Protein interactions for RNA: ENST00000340027.9

NCR3-201, Transcript of natural cytotoxicity triggering receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCR3, Length 1,042 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCR3-201ENST00000340027 CEP170BQ9Y4F5 1589 aaPredicted RBP21.32■■□□□ 1
NCR3-201ENST00000340027 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.32■■□□□ 1
NCR3-201ENST00000340027 NUTM2DQ5VT03 806 aaPredicted RBP21.3■■□□□ 1
NCR3-201ENST00000340027 EID1Q9Y6B2 187 aa21.3■■□□□ 1
NCR3-201ENST00000340027 RIMS2Q9UQ26 1411 aa21.29■■□□□ 1
NCR3-201ENST00000340027 PPLO60437 1756 aa21.28■■□□□ 1
NCR3-201ENST00000340027 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
NCR3-201ENST00000340027 MYOM2P54296 1465 aa21.27■■□□□ 1
NCR3-201ENST00000340027 IFT172Q9UG01 1749 aa21.27■■□□□ 1
NCR3-201ENST00000340027 TMEM2Q9UHN6 1383 aa21.27■■□□□ 1
NCR3-201ENST00000340027 BCANQ96GW7 911 aa21.27■■□□□ 1
NCR3-201ENST00000340027 NEXMIFQ5QGS0 1516 aa21.27■■□□□ 1
NCR3-201ENST00000340027 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
NCR3-201ENST00000340027 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
NCR3-201ENST00000340027 TXNDC2Q86VQ3 553 aa21.24■□□□□ 0.99
NCR3-201ENST00000340027 ADGRF5Q8IZF2 1346 aa21.24■□□□□ 0.99
NCR3-201ENST00000340027 ZFYVE9O95405 1425 aa21.21■□□□□ 0.99
NCR3-201ENST00000340027 ANKLE2Q86XL3 938 aa21.21■□□□□ 0.99
NCR3-201ENST00000340027 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
NCR3-201ENST00000340027 SLIT1O75093 1534 aa21.2■□□□□ 0.98
NCR3-201ENST00000340027 ROCK2O75116 1388 aaKnown RBP21.19■□□□□ 0.98
NCR3-201ENST00000340027 ARHGAP23Q9P227 1491 aa21.18■□□□□ 0.98
NCR3-201ENST00000340027 NRXN1Q9ULB1 1477 aa21.16■□□□□ 0.98
NCR3-201ENST00000340027 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
NCR3-201ENST00000340027 LTKP29376 864 aa21.16■□□□□ 0.98
NCR3-201ENST00000340027 CFAP70Q5T0N1 1121 aa21.16■□□□□ 0.98
NCR3-201ENST00000340027 CARD11Q9BXL7 1154 aa21.16■□□□□ 0.98
NCR3-201ENST00000340027 TRPM1Q7Z4N2 1603 aa21.15■□□□□ 0.98
NCR3-201ENST00000340027 RALGAPBQ86X10 1494 aa21.15■□□□□ 0.98
NCR3-201ENST00000340027 SCAF11Q99590 1463 aaKnown RBP21.15■□□□□ 0.98
NCR3-201ENST00000340027 PLEKHG1Q9ULL1 1385 aa21.13■□□□□ 0.97
NCR3-201ENST00000340027 C14orf93Q9H972 538 aaKnown RBP21.13■□□□□ 0.97
NCR3-201ENST00000340027 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
NCR3-201ENST00000340027 LAMC1P11047 1609 aa21.12■□□□□ 0.97
NCR3-201ENST00000340027 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
NCR3-201ENST00000340027 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
NCR3-201ENST00000340027 HSPA2P54652 639 aa21.1■□□□□ 0.97
NCR3-201ENST00000340027 LMTK3Q96Q04 1460 aa21.09■□□□□ 0.97
NCR3-201ENST00000340027 EIF4G2P78344 907 aaKnown RBP eCLIP21.09■□□□□ 0.97
NCR3-201ENST00000340027 NCKAP5LQ9HCH0 1330 aa21.08■□□□□ 0.97
NCR3-201ENST00000340027 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
NCR3-201ENST00000340027 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
NCR3-201ENST00000340027 SETBP1Q9Y6X0 1596 aa21.07■□□□□ 0.96
NCR3-201ENST00000340027 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
NCR3-201ENST00000340027 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
NCR3-201ENST00000340027 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
NCR3-201ENST00000340027 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
NCR3-201ENST00000340027 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
NCR3-201ENST00000340027 EIF3AQ14152 1382 aaKnown RBP21.03■□□□□ 0.96
NCR3-201ENST00000340027 USP47Q96K76 1375 aa21.03■□□□□ 0.96
NCR3-201ENST00000340027 TBX22Q9Y458 520 aa21.03■□□□□ 0.96
NCR3-201ENST00000340027 STK26Q9P289 416 aa21.02■□□□□ 0.96
NCR3-201ENST00000340027 DIP2AQ14689 1571 aa21.02■□□□□ 0.95
NCR3-201ENST00000340027 NRXN3Q9Y4C0 1643 aa21.01■□□□□ 0.95
NCR3-201ENST00000340027 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
NCR3-201ENST00000340027 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
NCR3-201ENST00000340027 ADAMTS13Q76LX8 1427 aa21■□□□□ 0.95
NCR3-201ENST00000340027 MED14O60244 1454 aa21■□□□□ 0.95
NCR3-201ENST00000340027 ADGRB1O14514 1584 aa20.98■□□□□ 0.95
NCR3-201ENST00000340027 HIRIP3Q9BW71 556 aaPredicted RBP20.98■□□□□ 0.95
NCR3-201ENST00000340027 YTHDC2Q9H6S0 1430 aaKnown RBP20.97■□□□□ 0.95
NCR3-201ENST00000340027 METP08581 1390 aa20.97■□□□□ 0.95
NCR3-201ENST00000340027 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
NCR3-201ENST00000340027 SETD1AO15047 1707 aaKnown RBP20.95■□□□□ 0.94
NCR3-201ENST00000340027 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
NCR3-201ENST00000340027 POGKQ9P215 609 aa20.95■□□□□ 0.94
NCR3-201ENST00000340027 DMRT2Q9Y5R5 561 aa20.95■□□□□ 0.94
NCR3-201ENST00000340027 LRPPRCP42704 1394 aaKnown RBP20.95■□□□□ 0.94
NCR3-201ENST00000340027 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
NCR3-201ENST00000340027 PIK3R4Q99570 1358 aa20.94■□□□□ 0.94
NCR3-201ENST00000340027 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
NCR3-201ENST00000340027 CENPJQ9HC77 1338 aaPredicted RBP20.92■□□□□ 0.94
NCR3-201ENST00000340027 SLC24A1O60721 1099 aa20.91■□□□□ 0.94
NCR3-201ENST00000340027 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
NCR3-201ENST00000340027 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
NCR3-201ENST00000340027 PRAM1Q96QH2 718 aa20.89■□□□□ 0.93
NCR3-201ENST00000340027 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
NCR3-201ENST00000340027 DLC1Q96QB1 1528 aa20.88■□□□□ 0.93
NCR3-201ENST00000340027 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
NCR3-201ENST00000340027 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
NCR3-201ENST00000340027 KCNA6P17658 529 aa20.86■□□□□ 0.93
NCR3-201ENST00000340027 TMF1P82094 1093 aa20.86■□□□□ 0.93
NCR3-201ENST00000340027 SIRT1Q96EB6 747 aa20.86■□□□□ 0.93
NCR3-201ENST00000340027 PTPRUQ92729 1446 aa20.86■□□□□ 0.93
NCR3-201ENST00000340027 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
NCR3-201ENST00000340027 TECPR2O15040 1411 aa20.84■□□□□ 0.93
NCR3-201ENST00000340027 CPS1P31327 1500 aa20.83■□□□□ 0.93
NCR3-201ENST00000340027 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.93
NCR3-201ENST00000340027 WAPLQ7Z5K2 1190 aa20.83■□□□□ 0.93
NCR3-201ENST00000340027 FAM135BQ49AJ0 1406 aa20.83■□□□□ 0.93
NCR3-201ENST00000340027 QRICH2Q9H0J4 1663 aa20.83■□□□□ 0.92
NCR3-201ENST00000340027 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
NCR3-201ENST00000340027 MINK1Q8N4C8 1332 aaPredicted RBP20.8■□□□□ 0.92
NCR3-201ENST00000340027 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
NCR3-201ENST00000340027 TESK2Q96S53 571 aa20.8■□□□□ 0.92
NCR3-201ENST00000340027 XRN1Q8IZH2 1706 aaKnown RBP20.8■□□□□ 0.92
NCR3-201ENST00000340027 ROBO2Q9HCK4 1378 aa20.8■□□□□ 0.92
NCR3-201ENST00000340027 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
NCR3-201ENST00000340027 PROSER2Q86WR7 435 aaPredicted RBP20.79■□□□□ 0.92
NCR3-201ENST00000340027 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms