RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 NUTM2FA1L443 756 aa14.08□□□□□ -0.15
SEMA4D-201ENST00000339861 HSP90AB1P08238 724 aaKnown RBP14.08□□□□□ -0.15
SEMA4D-201ENST00000339861 PMFBP1Q8TBY8 1022 aa14.08□□□□□ -0.16
SEMA4D-201ENST00000339861 SPATA31E1Q6ZUB1 1445 aa14.08□□□□□ -0.16
SEMA4D-201ENST00000339861 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
SEMA4D-201ENST00000339861 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
SEMA4D-201ENST00000339861 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
SEMA4D-201ENST00000339861 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-201ENST00000339861 ZBTB7CA1YPR0 619 aa14.07□□□□□ -0.16
SEMA4D-201ENST00000339861 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-201ENST00000339861 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-201ENST00000339861 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
SEMA4D-201ENST00000339861 TESK2Q96S53 571 aa14.06□□□□□ -0.16
SEMA4D-201ENST00000339861 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-201ENST00000339861 SLFN5Q08AF3 891 aa14.06□□□□□ -0.16
SEMA4D-201ENST00000339861 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
SEMA4D-201ENST00000339861 ATP10BO94823 1461 aa14.05□□□□□ -0.16
SEMA4D-201ENST00000339861 CCDC141Q6ZP82 1450 aa14.05□□□□□ -0.16
SEMA4D-201ENST00000339861 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
SEMA4D-201ENST00000339861 DISP1Q96F81 1524 aa14.04□□□□□ -0.16
SEMA4D-201ENST00000339861 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
SEMA4D-201ENST00000339861 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
SEMA4D-201ENST00000339861 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
SEMA4D-201ENST00000339861 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
SEMA4D-201ENST00000339861 NAP1L5Q96NT1 182 aaPredicted RBP14.03□□□□□ -0.16
SEMA4D-201ENST00000339861 ZKSCAN2Q63HK3 967 aa14.03□□□□□ -0.16
SEMA4D-201ENST00000339861 RALGAPBQ86X10 1494 aa14.03□□□□□ -0.16
SEMA4D-201ENST00000339861 ABCA5Q8WWZ7 1642 aa14.03□□□□□ -0.16
SEMA4D-201ENST00000339861 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.16
SEMA4D-201ENST00000339861 ADGRF5Q8IZF2 1346 aa14.02□□□□□ -0.16
SEMA4D-201ENST00000339861 TRIM44Q96DX7 344 aaPredicted RBP14.02□□□□□ -0.16
SEMA4D-201ENST00000339861 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
SEMA4D-201ENST00000339861 HDGFL2Q7Z4V5 671 aaPredicted RBP14.01□□□□□ -0.17
SEMA4D-201ENST00000339861 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
SEMA4D-201ENST00000339861 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
SEMA4D-201ENST00000339861 IGHDP01880 384 aa14.01□□□□□ -0.17
SEMA4D-201ENST00000339861 DZIP1LQ8IYY4 767 aaKnown RBP14.01□□□□□ -0.17
SEMA4D-201ENST00000339861 PARD3Q8TEW0 1356 aa14□□□□□ -0.17
SEMA4D-201ENST00000339861 ADAMTS12P58397 1594 aa14□□□□□ -0.17
SEMA4D-201ENST00000339861 KIAA0556O60303 1618 aa14□□□□□ -0.17
SEMA4D-201ENST00000339861 HMOX1P09601 288 aa14□□□□□ -0.17
SEMA4D-201ENST00000339861 RIPK4P57078 832 aa14□□□□□ -0.17
SEMA4D-201ENST00000339861 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
SEMA4D-201ENST00000339861 DNMT1P26358 1616 aaKnown RBP13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 TNNQ9UQP3 1299 aa13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 IPO8O15397 1037 aaKnown RBP13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 ANKRD45Q5TZF3 282 aa13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 KIF14Q15058 1648 aa13.99□□□□□ -0.17
SEMA4D-201ENST00000339861 EVC2Q86UK5 1308 aa13.98□□□□□ -0.17
SEMA4D-201ENST00000339861 RNF123Q5XPI4 1314 aa13.98□□□□□ -0.17
SEMA4D-201ENST00000339861 KDM5BQ9UGL1 1544 aa13.98□□□□□ -0.17
SEMA4D-201ENST00000339861 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
SEMA4D-201ENST00000339861 LRPPRCP42704 1394 aaKnown RBP13.97□□□□□ -0.17
SEMA4D-201ENST00000339861 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
SEMA4D-201ENST00000339861 C1orf115Q9H7X2 142 aa13.96□□□□□ -0.17
SEMA4D-201ENST00000339861 GCC2Q8IWJ2 1684 aa13.96□□□□□ -0.18
SEMA4D-201ENST00000339861 GOLGA6L22H0YM25 854 aa13.95□□□□□ -0.18
SEMA4D-201ENST00000339861 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
SEMA4D-201ENST00000339861 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
SEMA4D-201ENST00000339861 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
SEMA4D-201ENST00000339861 FOXD4L5Q5VV16 416 aaPredicted RBP13.94□□□□□ -0.18
SEMA4D-201ENST00000339861 FOXD4L4Q8WXT5 416 aaPredicted RBP13.94□□□□□ -0.18
SEMA4D-201ENST00000339861 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 RAPGEF3O95398 923 aa13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 L1TD1Q5T7N2 865 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 FBLN1P23142 703 aa13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 C22orf23Q9BZE7 217 aa13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-201ENST00000339861 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
SEMA4D-201ENST00000339861 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
SEMA4D-201ENST00000339861 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-201ENST00000339861 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-201ENST00000339861 CARD14Q9BXL6 1004 aa13.91□□□□□ -0.18
SEMA4D-201ENST00000339861 SEC24BO95487 1268 aa13.91□□□□□ -0.18
SEMA4D-201ENST00000339861 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
SEMA4D-201ENST00000339861 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-201ENST00000339861 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
SEMA4D-201ENST00000339861 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.19
SEMA4D-201ENST00000339861 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
SEMA4D-201ENST00000339861 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
SEMA4D-201ENST00000339861 A2MP01023 1474 aa13.89□□□□□ -0.19
SEMA4D-201ENST00000339861 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
SEMA4D-201ENST00000339861 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
SEMA4D-201ENST00000339861 RLBP1P12271 317 aa13.88□□□□□ -0.19
SEMA4D-201ENST00000339861 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
SEMA4D-201ENST00000339861 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
SEMA4D-201ENST00000339861 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
SEMA4D-201ENST00000339861 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
SEMA4D-201ENST00000339861 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
SEMA4D-201ENST00000339861 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
SEMA4D-201ENST00000339861 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
SEMA4D-201ENST00000339861 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
SEMA4D-201ENST00000339861 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
SEMA4D-201ENST00000339861 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms