RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP1-201ENST00000339269 KANK1Q14678 1352 aa17.7■□□□□ 0.42
CDK5RAP1-201ENST00000339269 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP1-201ENST00000339269 RALBP1Q15311 655 aa17.69■□□□□ 0.42
CDK5RAP1-201ENST00000339269 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
CDK5RAP1-201ENST00000339269 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP1-201ENST00000339269 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP1-201ENST00000339269 KDM4FA0A1W2PPD8 638 aa17.65■□□□□ 0.42
CDK5RAP1-201ENST00000339269 SCAF11Q99590 1463 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP1-201ENST00000339269 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
CDK5RAP1-201ENST00000339269 MYOM2P54296 1465 aa17.65■□□□□ 0.42
CDK5RAP1-201ENST00000339269 MROH2AA6NES4 1674 aa17.65■□□□□ 0.42
CDK5RAP1-201ENST00000339269 KIAA1210Q9ULL0 1709 aa17.64■□□□□ 0.41
CDK5RAP1-201ENST00000339269 MLECQ14165 292 aa17.64■□□□□ 0.41
CDK5RAP1-201ENST00000339269 IFT172Q9UG01 1749 aa17.64■□□□□ 0.41
CDK5RAP1-201ENST00000339269 ADAMTSL3P82987 1691 aa17.64■□□□□ 0.41
CDK5RAP1-201ENST00000339269 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
CDK5RAP1-201ENST00000339269 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
CDK5RAP1-201ENST00000339269 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
CDK5RAP1-201ENST00000339269 TMF1P82094 1093 aa17.62■□□□□ 0.41
CDK5RAP1-201ENST00000339269 PANK3Q9H999 370 aa17.62■□□□□ 0.41
CDK5RAP1-201ENST00000339269 ADGRB3O60242 1522 aa17.61■□□□□ 0.41
CDK5RAP1-201ENST00000339269 NPATQ14207 1427 aa17.61■□□□□ 0.41
CDK5RAP1-201ENST00000339269 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
CDK5RAP1-201ENST00000339269 AGLP35573 1532 aa17.6■□□□□ 0.41
CDK5RAP1-201ENST00000339269 NLRP13Q86W25 1043 aa17.6■□□□□ 0.41
CDK5RAP1-201ENST00000339269 ADGRF5Q8IZF2 1346 aa17.6■□□□□ 0.41
CDK5RAP1-201ENST00000339269 RIMS1Q86UR5 1692 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP1-201ENST00000339269 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
CDK5RAP1-201ENST00000339269 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.41
CDK5RAP1-201ENST00000339269 MYOM1P52179 1685 aa17.58■□□□□ 0.4
CDK5RAP1-201ENST00000339269 NUDCQ9Y266 331 aa17.58■□□□□ 0.4
CDK5RAP1-201ENST00000339269 ABCC3O15438 1527 aa17.57■□□□□ 0.4
CDK5RAP1-201ENST00000339269 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
CDK5RAP1-201ENST00000339269 KIF1BO60333 1816 aa17.57■□□□□ 0.4
CDK5RAP1-201ENST00000339269 SYNMO15061 1565 aa17.56■□□□□ 0.4
CDK5RAP1-201ENST00000339269 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP1-201ENST00000339269 CFAP70Q5T0N1 1121 aa17.55■□□□□ 0.4
CDK5RAP1-201ENST00000339269 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP1-201ENST00000339269 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP1-201ENST00000339269 GGT6Q6P531 493 aa17.52■□□□□ 0.4
CDK5RAP1-201ENST00000339269 NOS1P29475 1434 aa17.52■□□□□ 0.4
CDK5RAP1-201ENST00000339269 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.39
CDK5RAP1-201ENST00000339269 INSRP06213 1382 aa17.52■□□□□ 0.39
CDK5RAP1-201ENST00000339269 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.39
CDK5RAP1-201ENST00000339269 ERVK-7P63135 1459 aa17.52■□□□□ 0.39
CDK5RAP1-201ENST00000339269 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
CDK5RAP1-201ENST00000339269 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP1-201ENST00000339269 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
CDK5RAP1-201ENST00000339269 PTPRMP28827 1452 aa17.5■□□□□ 0.39
CDK5RAP1-201ENST00000339269 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
CDK5RAP1-201ENST00000339269 ESF1Q9H501 851 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP1-201ENST00000339269 PPLO60437 1756 aa17.5■□□□□ 0.39
CDK5RAP1-201ENST00000339269 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP1-201ENST00000339269 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
CDK5RAP1-201ENST00000339269 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
CDK5RAP1-201ENST00000339269 PIK3C2BO00750 1634 aa17.48■□□□□ 0.39
CDK5RAP1-201ENST00000339269 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
CDK5RAP1-201ENST00000339269 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
CDK5RAP1-201ENST00000339269 KDM5AP29375 1690 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP1-201ENST00000339269 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
CDK5RAP1-201ENST00000339269 C3P01024 1663 aa17.46■□□□□ 0.39
CDK5RAP1-201ENST00000339269 SBNO2Q9Y2G9 1366 aa17.45■□□□□ 0.38
CDK5RAP1-201ENST00000339269 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
CDK5RAP1-201ENST00000339269 ARHGAP31Q2M1Z3 1444 aa17.44■□□□□ 0.38
CDK5RAP1-201ENST00000339269 PRKCSHP14314 528 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP1-201ENST00000339269 PPP2R1AP30153 589 aa17.44■□□□□ 0.38
CDK5RAP1-201ENST00000339269 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP1-201ENST00000339269 C14orf93Q9H972 538 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP1-201ENST00000339269 ZC3H13Q5T200 1668 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP1-201ENST00000339269 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
CDK5RAP1-201ENST00000339269 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
CDK5RAP1-201ENST00000339269 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP1-201ENST00000339269 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP1-201ENST00000339269 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
CDK5RAP1-201ENST00000339269 NEXMIFQ5QGS0 1516 aa17.41■□□□□ 0.38
CDK5RAP1-201ENST00000339269 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
CDK5RAP1-201ENST00000339269 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
CDK5RAP1-201ENST00000339269 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
CDK5RAP1-201ENST00000339269 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP1-201ENST00000339269 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
CDK5RAP1-201ENST00000339269 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP1-201ENST00000339269 ZMYM3Q14202 1370 aa17.38■□□□□ 0.37
CDK5RAP1-201ENST00000339269 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
CDK5RAP1-201ENST00000339269 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
CDK5RAP1-201ENST00000339269 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP1-201ENST00000339269 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP1-201ENST00000339269 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
CDK5RAP1-201ENST00000339269 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
CDK5RAP1-201ENST00000339269 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.37
CDK5RAP1-201ENST00000339269 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.37
CDK5RAP1-201ENST00000339269 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.37
CDK5RAP1-201ENST00000339269 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.37
CDK5RAP1-201ENST00000339269 IDI1Q13907 227 aa17.33■□□□□ 0.36
CDK5RAP1-201ENST00000339269 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
CDK5RAP1-201ENST00000339269 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
CDK5RAP1-201ENST00000339269 ZFYVE9O95405 1425 aa17.32■□□□□ 0.36
CDK5RAP1-201ENST00000339269 ARHGEF28Q8N1W1 1705 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP1-201ENST00000339269 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
CDK5RAP1-201ENST00000339269 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms