RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CPLX2Q6PUV4 134 aaKnown RBP14.39□□□□□ -0.11
SHANK2-201ENST00000338508 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
SHANK2-201ENST00000338508 NUP155O75694 1391 aa14.38□□□□□ -0.11
SHANK2-201ENST00000338508 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
SHANK2-201ENST00000338508 HNRNPMP52272 730 aaKnown RBP eCLIP14.38□□□□□ -0.114e-9■■■■■ 39.3
SHANK2-201ENST00000338508 TRDNQ13061 729 aa14.38□□□□□ -0.11
SHANK2-201ENST00000338508 CCAR1Q8IX12 1150 aaKnown RBP14.38□□□□□ -0.11
SHANK2-201ENST00000338508 RUFY1Q96T51 708 aa14.38□□□□□ -0.11
SHANK2-201ENST00000338508 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHANK2-201ENST00000338508 IFIT2P09913 472 aaKnown RBP14.37□□□□□ -0.11
SHANK2-201ENST00000338508 RALBP1Q15311 655 aa14.37□□□□□ -0.11
SHANK2-201ENST00000338508 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
SHANK2-201ENST00000338508 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
SHANK2-201ENST00000338508 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
SHANK2-201ENST00000338508 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
SHANK2-201ENST00000338508 ZNF428Q96B54 188 aa14.35□□□□□ -0.11
SHANK2-201ENST00000338508 VPS37CA5D8V6 355 aaPredicted RBP14.35□□□□□ -0.11
SHANK2-201ENST00000338508 AIMP1Q12904 312 aaKnown RBP14.35□□□□□ -0.11
SHANK2-201ENST00000338508 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
SHANK2-201ENST00000338508 COG3Q96JB2 828 aa14.34□□□□□ -0.11
SHANK2-201ENST00000338508 CUX2O14529 1486 aa14.34□□□□□ -0.11
SHANK2-201ENST00000338508 PSME1Q06323 249 aa14.34□□□□□ -0.11
SHANK2-201ENST00000338508 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
SHANK2-201ENST00000338508 PDILTQ8N807 584 aa14.34□□□□□ -0.11
SHANK2-201ENST00000338508 NEUROD6Q96NK8 337 aa14.33□□□□□ -0.11
SHANK2-201ENST00000338508 ATP6V1DQ9Y5K8 247 aa14.33□□□□□ -0.12
SHANK2-201ENST00000338508 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
SHANK2-201ENST00000338508 HOOK1Q9UJC3 728 aaKnown RBP14.33□□□□□ -0.12
SHANK2-201ENST00000338508 MPHOSPH9Q99550 1183 aa14.33□□□□□ -0.12
SHANK2-201ENST00000338508 STK11IPQ8N1F8 1099 aa14.32□□□□□ -0.12
SHANK2-201ENST00000338508 OFD1O75665 1012 aa14.32□□□□□ -0.12
SHANK2-201ENST00000338508 PLCD4Q9BRC7 762 aa14.32□□□□□ -0.12
SHANK2-201ENST00000338508 WASHC4Q2M389 1173 aa14.32□□□□□ -0.12
SHANK2-201ENST00000338508 EEA1Q15075 1411 aa14.31□□□□□ -0.12
SHANK2-201ENST00000338508 ZKSCAN1P17029 563 aaPredicted RBP14.31□□□□□ -0.12
SHANK2-201ENST00000338508 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
SHANK2-201ENST00000338508 CCER2I3L3R5 266 aa14.31□□□□□ -0.12
SHANK2-201ENST00000338508 FAM13BQ9NYF5 915 aa14.31□□□□□ -0.12
SHANK2-201ENST00000338508 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
SHANK2-201ENST00000338508 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
SHANK2-201ENST00000338508 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
SHANK2-201ENST00000338508 RUFY2Q8WXA3 655 aa14.3□□□□□ -0.12
SHANK2-201ENST00000338508 AK7Q96M32 723 aa14.3□□□□□ -0.12
SHANK2-201ENST00000338508 CAGE1Q8TC20 777 aa14.3□□□□□ -0.12
SHANK2-201ENST00000338508 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.12
SHANK2-201ENST00000338508 TEX35Q5T0J7 233 aa14.3□□□□□ -0.12
SHANK2-201ENST00000338508 SASS6Q6UVJ0 657 aa14.3□□□□□ -0.12
SHANK2-201ENST00000338508 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
SHANK2-201ENST00000338508 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
SHANK2-201ENST00000338508 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
SHANK2-201ENST00000338508 ARHGAP35Q9NRY4 1499 aa14.29□□□□□ -0.12
SHANK2-201ENST00000338508 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
SHANK2-201ENST00000338508 ATP2B1P20020 1258 aa14.28□□□□□ -0.12
SHANK2-201ENST00000338508 IFT57Q9NWB7 429 aa14.28□□□□□ -0.12
SHANK2-201ENST00000338508 SETD5Q9C0A6 1442 aa14.28□□□□□ -0.12
SHANK2-201ENST00000338508 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.12
SHANK2-201ENST00000338508 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.12
SHANK2-201ENST00000338508 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.12
SHANK2-201ENST00000338508 ANKRD62A6NC57 917 aa14.27□□□□□ -0.12
SHANK2-201ENST00000338508 EFCAB2Q5VUJ9 269 aa14.27□□□□□ -0.13
SHANK2-201ENST00000338508 NEFHP12036 1026 aa14.27□□□□□ -0.13
SHANK2-201ENST00000338508 RIC3Q7Z5B4 369 aa14.27□□□□□ -0.13
SHANK2-201ENST00000338508 PANK3Q9H999 370 aa14.26□□□□□ -0.13
SHANK2-201ENST00000338508 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
SHANK2-201ENST00000338508 CRBNQ96SW2 442 aa14.26□□□□□ -0.13
SHANK2-201ENST00000338508 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
SHANK2-201ENST00000338508 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
SHANK2-201ENST00000338508 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
SHANK2-201ENST00000338508 PPM1FP49593 454 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-201ENST00000338508 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
SHANK2-201ENST00000338508 CCDC97Q96F63 343 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-201ENST00000338508 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
SHANK2-201ENST00000338508 DDX58O95786 925 aaKnown RBP14.25□□□□□ -0.13
SHANK2-201ENST00000338508 MNS1Q8NEH6 495 aa14.25□□□□□ -0.13
SHANK2-201ENST00000338508 SOGA1O94964 1423 aa14.24□□□□□ -0.13
SHANK2-201ENST00000338508 ZKSCAN2Q63HK3 967 aa14.24□□□□□ -0.13
SHANK2-201ENST00000338508 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
SHANK2-201ENST00000338508 RNF20Q5VTR2 975 aa14.24□□□□□ -0.13
SHANK2-201ENST00000338508 CDR1P51861 262 aa14.23□□□□□ -0.13
SHANK2-201ENST00000338508 CCDC173Q0VFZ6 552 aa14.23□□□□□ -0.13
SHANK2-201ENST00000338508 HMOX1P09601 288 aa14.23□□□□□ -0.13
SHANK2-201ENST00000338508 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
SHANK2-201ENST00000338508 BRMS1Q9HCU9 246 aa14.22□□□□□ -0.13
SHANK2-201ENST00000338508 NACADO15069 1562 aa14.21□□□□□ -0.13
SHANK2-201ENST00000338508 ZHX3Q9H4I2 956 aa14.21□□□□□ -0.13
SHANK2-201ENST00000338508 CGNL1Q0VF96 1302 aa14.21□□□□□ -0.13
SHANK2-201ENST00000338508 CDK5RAP3Q96JB5 506 aa14.21□□□□□ -0.13
SHANK2-201ENST00000338508 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.13
SHANK2-201ENST00000338508 REC8O95072 547 aa14.21□□□□□ -0.13
SHANK2-201ENST00000338508 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
SHANK2-201ENST00000338508 CCDC73Q6ZRK6 1079 aa14.21□□□□□ -0.14
SHANK2-201ENST00000338508 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
SHANK2-201ENST00000338508 H0YHG0 523 aa14.2□□□□□ -0.14
SHANK2-201ENST00000338508 KRT18P05783 430 aaKnown RBP14.2□□□□□ -0.14
SHANK2-201ENST00000338508 RIPK4P57078 832 aa14.2□□□□□ -0.14
SHANK2-201ENST00000338508 SYCP1Q15431 976 aa14.2□□□□□ -0.14
SHANK2-201ENST00000338508 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
SHANK2-201ENST00000338508 FMNL2Q96PY5 1086 aa14.2□□□□□ -0.14
SHANK2-201ENST00000338508 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
SHANK2-201ENST00000338508 NLRP13Q86W25 1043 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms