RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 SPAG9O60271 1321 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-201ENST00000337659 NRKQ7Z2Y5 1582 aa7.83□□□□□ -1.16
PRPF4B-201ENST00000337659 CCDC144AA2RUR9 1427 aa7.83□□□□□ -1.16
PRPF4B-201ENST00000337659 TSPY4P0CV99 314 aa7.83□□□□□ -1.16
PRPF4B-201ENST00000337659 TSPY10P0CW01 314 aa7.83□□□□□ -1.16
PRPF4B-201ENST00000337659 KTN1Q86UP2 1357 aaKnown RBP7.82□□□□□ -1.16
PRPF4B-201ENST00000337659 AKAP12Q02952 1782 aa7.82□□□□□ -1.16
PRPF4B-201ENST00000337659 TECPR2O15040 1411 aa7.81□□□□□ -1.16
PRPF4B-201ENST00000337659 TONSLQ96HA7 1378 aa7.81□□□□□ -1.16
PRPF4B-201ENST00000337659 RRP7BPQ9NSQ0 103 aa7.81□□□□□ -1.16
PRPF4B-201ENST00000337659 SCAF11Q99590 1463 aaKnown RBP7.8□□□□□ -1.16
PRPF4B-201ENST00000337659 NWD1Q149M9 1564 aa7.8□□□□□ -1.16
PRPF4B-201ENST00000337659 MON2Q7Z3U7 1717 aa7.8□□□□□ -1.16
PRPF4B-201ENST00000337659 RPGRIP1LQ68CZ1 1315 aa7.8□□□□□ -1.16
PRPF4B-201ENST00000337659 NPC1L1Q9UHC9 1359 aa7.79□□□□□ -1.16
PRPF4B-201ENST00000337659 ROCK2O75116 1388 aaKnown RBP7.79□□□□□ -1.16
PRPF4B-201ENST00000337659 KANK1Q14678 1352 aa7.79□□□□□ -1.16
PRPF4B-201ENST00000337659 NLRP1Q9C000 1473 aa7.79□□□□□ -1.16
PRPF4B-201ENST00000337659 NALCNQ8IZF0 1738 aa7.79□□□□□ -1.16
PRPF4B-201ENST00000337659 PUS7Q96PZ0 661 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-201ENST00000337659 A2ML1A8K2U0 1454 aa7.78□□□□□ -1.16
PRPF4B-201ENST00000337659 CCDC7Q96M83 1385 aa7.77□□□□□ -1.16
PRPF4B-201ENST00000337659 ALKQ9UM73 1620 aa7.77□□□□□ -1.16
PRPF4B-201ENST00000337659 NBPF8Q3BBV2 869 aa7.77□□□□□ -1.16
PRPF4B-201ENST00000337659 SIN3AQ96ST3 1273 aa7.77□□□□□ -1.17
PRPF4B-201ENST00000337659 L3MBTL2Q969R5 705 aa7.77□□□□□ -1.17
PRPF4B-201ENST00000337659 SHPRHQ149N8 1683 aa7.76□□□□□ -1.17
PRPF4B-201ENST00000337659 CDC42BPGQ6DT37 1551 aa7.76□□□□□ -1.17
PRPF4B-201ENST00000337659 PKD2Q13563 968 aa7.76□□□□□ -1.17
PRPF4B-201ENST00000337659 KIF20BQ96Q89 1820 aa7.76□□□□□ -1.17
PRPF4B-201ENST00000337659 MARF1Q9Y4F3 1742 aaKnown RBP7.76□□□□□ -1.17
PRPF4B-201ENST00000337659 PHRF1Q9P1Y6 1649 aaKnown RBP7.75□□□□□ -1.17
PRPF4B-201ENST00000337659 ATP1B4Q9UN42 357 aaPredicted RBP7.75□□□□□ -1.17
PRPF4B-201ENST00000337659 TULP4Q9NRJ4 1543 aa7.75□□□□□ -1.17
PRPF4B-201ENST00000337659 SLC4A1APQ9BWU0 796 aaKnown RBP7.75□□□□□ -1.17
PRPF4B-201ENST00000337659 CCER2I3L3R5 266 aa7.74□□□□□ -1.17
PRPF4B-201ENST00000337659 AFAP1Q8N556 730 aa7.74□□□□□ -1.17
PRPF4B-201ENST00000337659 ITSN1Q15811 1721 aa7.74□□□□□ -1.17
PRPF4B-201ENST00000337659 CHD2O14647 1828 aaKnown RBP7.73□□□□□ -1.17
PRPF4B-201ENST00000337659 CHIC2Q9UKJ5 165 aa7.73□□□□□ -1.17
PRPF4B-201ENST00000337659 WASHC2AQ641Q2 1341 aa7.73□□□□□ -1.17
PRPF4B-201ENST00000337659 WASHC2CQ9Y4E1 1318 aa7.73□□□□□ -1.17
PRPF4B-201ENST00000337659 USP47Q96K76 1375 aa7.72□□□□□ -1.17
PRPF4B-201ENST00000337659 PLPPR3Q6T4P5 718 aa7.72□□□□□ -1.17
PRPF4B-201ENST00000337659 TTBK1Q5TCY1 1321 aaPredicted RBP7.72□□□□□ -1.17
PRPF4B-201ENST00000337659 TESK2Q96S53 571 aa7.71□□□□□ -1.18
PRPF4B-201ENST00000337659 CEP170BQ9Y4F5 1589 aaPredicted RBP7.7□□□□□ -1.18
PRPF4B-201ENST00000337659 FAM135BQ49AJ0 1406 aa7.7□□□□□ -1.18
PRPF4B-201ENST00000337659 PARD3Q8TEW0 1356 aa7.7□□□□□ -1.18
PRPF4B-201ENST00000337659 FMN2Q9NZ56 1722 aa7.7□□□□□ -1.18
PRPF4B-201ENST00000337659 LRPPRCP42704 1394 aaKnown RBP7.69□□□□□ -1.18
PRPF4B-201ENST00000337659 SIRT1Q96EB6 747 aa7.69□□□□□ -1.18
PRPF4B-201ENST00000337659 NINLQ9Y2I6 1382 aa7.69□□□□□ -1.18
PRPF4B-201ENST00000337659 XIRP1Q702N8 1843 aaKnown RBP7.69□□□□□ -1.18
PRPF4B-201ENST00000337659 MST1RQ04912 1400 aa7.69□□□□□ -1.18
PRPF4B-201ENST00000337659 PLEKHG5O94827 1062 aa7.68□□□□□ -1.18
PRPF4B-201ENST00000337659 DIEXFQ68CQ4 756 aaKnown RBP7.68□□□□□ -1.18
PRPF4B-201ENST00000337659 RGPD1P0DJD0 1748 aa7.68□□□□□ -1.18
PRPF4B-201ENST00000337659 PTCH1Q13635 1447 aa7.68□□□□□ -1.18
PRPF4B-201ENST00000337659 CAMTA1Q9Y6Y1 1673 aa7.68□□□□□ -1.18
PRPF4B-201ENST00000337659 SMG6Q86US8 1419 aaKnown RBP7.67□□□□□ -1.18
PRPF4B-201ENST00000337659 CD163L1Q9NR16 1453 aa7.67□□□□□ -1.18
PRPF4B-201ENST00000337659 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-201ENST00000337659 SLC52A1Q9NWF4 448 aa7.67□□□□□ -1.18
PRPF4B-201ENST00000337659 CRYBG1Q9Y4K1 1723 aa7.67□□□□□ -1.18
PRPF4B-201ENST00000337659 ARID3CA6NKF2 412 aa7.67□□□□□ -1.18
PRPF4B-201ENST00000337659 BLMP54132 1417 aaPredicted RBP7.66□□□□□ -1.18
PRPF4B-201ENST00000337659 HSPA5P11021 654 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-201ENST00000337659 ITGAEP38570 1179 aa7.66□□□□□ -1.18
PRPF4B-201ENST00000337659 KIF7Q2M1P5 1343 aa7.66□□□□□ -1.18
PRPF4B-201ENST00000337659 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
PRPF4B-201ENST00000337659 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
PRPF4B-201ENST00000337659 C14orf93Q9H972 538 aaKnown RBP7.65□□□□□ -1.18
PRPF4B-201ENST00000337659 KCNH8Q96L42 1107 aa7.65□□□□□ -1.18
PRPF4B-201ENST00000337659 EIF3AQ14152 1382 aaKnown RBP7.65□□□□□ -1.18
PRPF4B-201ENST00000337659 ATP7BP35670 1465 aa7.65□□□□□ -1.18
PRPF4B-201ENST00000337659 ADAMTS13Q76LX8 1427 aa7.64□□□□□ -1.19
PRPF4B-201ENST00000337659 PLEKHG1Q9ULL1 1385 aa7.64□□□□□ -1.19
PRPF4B-201ENST00000337659 C11orf95C9JLR9 678 aaPredicted RBP7.64□□□□□ -1.19
PRPF4B-201ENST00000337659 DMRT2Q9Y5R5 561 aa7.64□□□□□ -1.19
PRPF4B-201ENST00000337659 COL3A1P02461 1466 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-201ENST00000337659 PIK3R4Q99570 1358 aa7.63□□□□□ -1.19
PRPF4B-201ENST00000337659 STRCP1A6NGW2 1772 aa7.63□□□□□ -1.19
PRPF4B-201ENST00000337659 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-201ENST00000337659 NCBP3Q53F19 620 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-201ENST00000337659 DISP3Q9P2K9 1392 aa7.63□□□□□ -1.19
PRPF4B-201ENST00000337659 ABCC6O95255 1503 aa7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 FOXD1Q16676 465 aa7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 ABCC11Q96J66 1382 aa7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 TRPM3Q9HCF6 1732 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 MED1Q15648 1581 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 CERKQ8TCT0 537 aa7.62□□□□□ -1.19
PRPF4B-201ENST00000337659 NSD2O96028 1365 aa7.61□□□□□ -1.19
PRPF4B-201ENST00000337659 BRD4O60885 1362 aaPredicted RBP7.6□□□□□ -1.19
PRPF4B-201ENST00000337659 KIF1AQ12756 1690 aa7.6□□□□□ -1.19
PRPF4B-201ENST00000337659 ZMYM3Q14202 1370 aa7.6□□□□□ -1.19
PRPF4B-201ENST00000337659 YTHDC2Q9H6S0 1430 aaKnown RBP7.6□□□□□ -1.19
PRPF4B-201ENST00000337659 KIF3BO15066 747 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms