RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
SKAP1-201ENST00000336915 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
SKAP1-201ENST00000336915 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
SKAP1-201ENST00000336915 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
SKAP1-201ENST00000336915 NOS1P29475 1434 aa13.11□□□□□ -0.31
SKAP1-201ENST00000336915 TMEM131LA2VDJ0 1609 aa13.11□□□□□ -0.31
SKAP1-201ENST00000336915 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
SKAP1-201ENST00000336915 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
SKAP1-201ENST00000336915 E9PCH4 1651 aa13.1□□□□□ -0.31
SKAP1-201ENST00000336915 KANK1Q14678 1352 aa13.1□□□□□ -0.31
SKAP1-201ENST00000336915 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
SKAP1-201ENST00000336915 KCNA6P17658 529 aa13.09□□□□□ -0.31
SKAP1-201ENST00000336915 LRP6O75581 1613 aa13.09□□□□□ -0.31
SKAP1-201ENST00000336915 SHPRHQ149N8 1683 aa13.08□□□□□ -0.31
SKAP1-201ENST00000336915 ZFYVE9O95405 1425 aa13.08□□□□□ -0.32
SKAP1-201ENST00000336915 MSH6P52701 1360 aa13.06□□□□□ -0.32
SKAP1-201ENST00000336915 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
SKAP1-201ENST00000336915 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
SKAP1-201ENST00000336915 UNC13BO14795 1591 aa13.06□□□□□ -0.32
SKAP1-201ENST00000336915 ADGRL2O95490 1459 aa13.05□□□□□ -0.32
SKAP1-201ENST00000336915 BCANQ96GW7 911 aa13.05□□□□□ -0.32
SKAP1-201ENST00000336915 RIMS2Q9UQ26 1411 aa13.04□□□□□ -0.32
SKAP1-201ENST00000336915 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
SKAP1-201ENST00000336915 JCADQ9P266 1359 aa13.02□□□□□ -0.32
SKAP1-201ENST00000336915 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.32
SKAP1-201ENST00000336915 RPRD2Q5VT52 1461 aaKnown RBP13.02□□□□□ -0.32
SKAP1-201ENST00000336915 DIP2AQ14689 1571 aa13.02□□□□□ -0.32
SKAP1-201ENST00000336915 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
SKAP1-201ENST00000336915 NRXN3Q9Y4C0 1643 aa13.01□□□□□ -0.33
SKAP1-201ENST00000336915 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
SKAP1-201ENST00000336915 NHSL1Q5SYE7 1610 aa13□□□□□ -0.33
SKAP1-201ENST00000336915 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
SKAP1-201ENST00000336915 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
SKAP1-201ENST00000336915 XRN1Q8IZH2 1706 aaKnown RBP13□□□□□ -0.33
SKAP1-201ENST00000336915 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
SKAP1-201ENST00000336915 SPHKAPQ2M3C7 1700 aa12.99□□□□□ -0.33
SKAP1-201ENST00000336915 PPP1R15AO75807 674 aaPredicted RBP12.98□□□□□ -0.33
SKAP1-201ENST00000336915 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
SKAP1-201ENST00000336915 NALCNQ8IZF0 1738 aa12.98□□□□□ -0.33
SKAP1-201ENST00000336915 TRPM2O94759 1503 aa12.97□□□□□ -0.33
SKAP1-201ENST00000336915 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SKAP1-201ENST00000336915 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
SKAP1-201ENST00000336915 PTPRUQ92729 1446 aa12.96□□□□□ -0.33
SKAP1-201ENST00000336915 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
SKAP1-201ENST00000336915 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
SKAP1-201ENST00000336915 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
SKAP1-201ENST00000336915 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
SKAP1-201ENST00000336915 ASXL1Q8IXJ9 1541 aa12.95□□□□□ -0.34
SKAP1-201ENST00000336915 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
SKAP1-201ENST00000336915 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
SKAP1-201ENST00000336915 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
SKAP1-201ENST00000336915 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
SKAP1-201ENST00000336915 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
SKAP1-201ENST00000336915 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
SKAP1-201ENST00000336915 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
SKAP1-201ENST00000336915 KIF1BO60333 1816 aa12.91□□□□□ -0.34
SKAP1-201ENST00000336915 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
SKAP1-201ENST00000336915 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
SKAP1-201ENST00000336915 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
SKAP1-201ENST00000336915 ATF3P18847 181 aa12.89□□□□□ -0.35
SKAP1-201ENST00000336915 ZNF772Q68DY9 489 aaPredicted RBP12.89□□□□□ -0.35
SKAP1-201ENST00000336915 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
SKAP1-201ENST00000336915 C19orf44Q9H6X5 657 aa12.89□□□□□ -0.35
SKAP1-201ENST00000336915 MST1RQ04912 1400 aa12.89□□□□□ -0.35
SKAP1-201ENST00000336915 PIK3R4Q99570 1358 aa12.88□□□□□ -0.35
SKAP1-201ENST00000336915 AMOTL2Q9Y2J4 779 aa12.88□□□□□ -0.35
SKAP1-201ENST00000336915 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.88□□□□□ -0.35
SKAP1-201ENST00000336915 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
SKAP1-201ENST00000336915 RGS12O14924 1447 aa12.87□□□□□ -0.35
SKAP1-201ENST00000336915 AFF2P51816 1311 aa12.87□□□□□ -0.35
SKAP1-201ENST00000336915 HDGFP51858 240 aaKnown RBP12.87□□□□□ -0.35
SKAP1-201ENST00000336915 DCCP43146 1447 aa12.87□□□□□ -0.35
SKAP1-201ENST00000336915 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
SKAP1-201ENST00000336915 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
SKAP1-201ENST00000336915 NEXMIFQ5QGS0 1516 aa12.86□□□□□ -0.35
SKAP1-201ENST00000336915 SETD5Q9C0A6 1442 aa12.85□□□□□ -0.35
SKAP1-201ENST00000336915 RXRBP28702 533 aa12.85□□□□□ -0.35
SKAP1-201ENST00000336915 METP08581 1390 aa12.85□□□□□ -0.35
SKAP1-201ENST00000336915 LAMC1P11047 1609 aa12.84□□□□□ -0.35
SKAP1-201ENST00000336915 NUP155O75694 1391 aa12.83□□□□□ -0.36
SKAP1-201ENST00000336915 PNPLA6Q8IY17 1366 aa12.83□□□□□ -0.36
SKAP1-201ENST00000336915 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
SKAP1-201ENST00000336915 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
SKAP1-201ENST00000336915 PPLO60437 1756 aa12.82□□□□□ -0.36
SKAP1-201ENST00000336915 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
SKAP1-201ENST00000336915 ITGAEP38570 1179 aa12.82□□□□□ -0.36
SKAP1-201ENST00000336915 EP400Q96L91 3159 aa12.81□□□□□ -0.36
SKAP1-201ENST00000336915 ZNF326Q5BKZ1 582 aaKnown RBP12.79□□□□□ -0.36
SKAP1-201ENST00000336915 COL22A1Q8NFW1 1626 aaPredicted RBP12.79□□□□□ -0.36
SKAP1-201ENST00000336915 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
SKAP1-201ENST00000336915 SRCAPQ6ZRS2 3230 aa12.78□□□□□ -0.36
SKAP1-201ENST00000336915 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
SKAP1-201ENST00000336915 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
SKAP1-201ENST00000336915 ADAMTS2O95450 1211 aa12.77□□□□□ -0.37
SKAP1-201ENST00000336915 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.37
SKAP1-201ENST00000336915 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
SKAP1-201ENST00000336915 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
SKAP1-201ENST00000336915 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
SKAP1-201ENST00000336915 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
SKAP1-201ENST00000336915 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms