RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 MYOM1P52179 1685 aa19.12■□□□□ 0.65
LIPA-202ENST00000336233 KIF1BO60333 1816 aa19.11■□□□□ 0.65
LIPA-202ENST00000336233 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
LIPA-202ENST00000336233 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
LIPA-202ENST00000336233 ABCA6Q8N139 1617 aa19.1■□□□□ 0.65
LIPA-202ENST00000336233 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
LIPA-202ENST00000336233 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
LIPA-202ENST00000336233 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.65
LIPA-202ENST00000336233 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.64
LIPA-202ENST00000336233 KIF3BO15066 747 aa19.07■□□□□ 0.64
LIPA-202ENST00000336233 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
LIPA-202ENST00000336233 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
LIPA-202ENST00000336233 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
LIPA-202ENST00000336233 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
LIPA-202ENST00000336233 ASXL1Q8IXJ9 1541 aa19.05■□□□□ 0.64
LIPA-202ENST00000336233 ADGRB3O60242 1522 aa19.05■□□□□ 0.64
LIPA-202ENST00000336233 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
LIPA-202ENST00000336233 POGZQ7Z3K3 1410 aa19.03■□□□□ 0.64
LIPA-202ENST00000336233 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
LIPA-202ENST00000336233 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
LIPA-202ENST00000336233 SLC24A1O60721 1099 aa19.02■□□□□ 0.64
LIPA-202ENST00000336233 FRMPD1Q5SYB0 1578 aa19.02■□□□□ 0.64
LIPA-202ENST00000336233 SETBP1Q9Y6X0 1596 aa19.02■□□□□ 0.64
LIPA-202ENST00000336233 PIK3C2GO75747 1445 aa19.02■□□□□ 0.63
LIPA-202ENST00000336233 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
LIPA-202ENST00000336233 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
LIPA-202ENST00000336233 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
LIPA-202ENST00000336233 CCDC136Q96JN2 1154 aa19■□□□□ 0.63
LIPA-202ENST00000336233 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
LIPA-202ENST00000336233 MSH5O43196 834 aa18.99■□□□□ 0.63
LIPA-202ENST00000336233 SBNO2Q9Y2G9 1366 aa18.99■□□□□ 0.63
LIPA-202ENST00000336233 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
LIPA-202ENST00000336233 SENP3-EIF4A1A0A087X0R7 540 aa18.98■□□□□ 0.63
LIPA-202ENST00000336233 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
LIPA-202ENST00000336233 PPLO60437 1756 aa18.97■□□□□ 0.63
LIPA-202ENST00000336233 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
LIPA-202ENST00000336233 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
LIPA-202ENST00000336233 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
LIPA-202ENST00000336233 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
LIPA-202ENST00000336233 NPATQ14207 1427 aa18.94■□□□□ 0.62
LIPA-202ENST00000336233 ABCC3O15438 1527 aa18.93■□□□□ 0.62
LIPA-202ENST00000336233 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
LIPA-202ENST00000336233 NEO1Q92859 1461 aa18.92■□□□□ 0.62
LIPA-202ENST00000336233 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
LIPA-202ENST00000336233 CDCA7LQ96GN5 454 aa18.91■□□□□ 0.62
LIPA-202ENST00000336233 CAMSAP1Q5T5Y3 1602 aa18.91■□□□□ 0.62
LIPA-202ENST00000336233 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
LIPA-202ENST00000336233 NOS1P29475 1434 aa18.91■□□□□ 0.62
LIPA-202ENST00000336233 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
LIPA-202ENST00000336233 ADGRB1O14514 1584 aa18.9■□□□□ 0.62
LIPA-202ENST00000336233 PIK3C2BO00750 1634 aa18.9■□□□□ 0.62
LIPA-202ENST00000336233 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
LIPA-202ENST00000336233 ZNF521Q96K83 1311 aa18.89■□□□□ 0.61
LIPA-202ENST00000336233 EXOC6Q8TAG9 804 aa18.88■□□□□ 0.61
LIPA-202ENST00000336233 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
LIPA-202ENST00000336233 QRICH2Q9H0J4 1663 aa18.87■□□□□ 0.61
LIPA-202ENST00000336233 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
LIPA-202ENST00000336233 DIP2CQ9Y2E4 1556 aa18.86■□□□□ 0.61
LIPA-202ENST00000336233 PLEKHH1Q9ULM0 1364 aa18.86■□□□□ 0.61
LIPA-202ENST00000336233 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
LIPA-202ENST00000336233 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
LIPA-202ENST00000336233 SIGLEC1Q9BZZ2 1709 aa18.85■□□□□ 0.61
LIPA-202ENST00000336233 C14orf93Q9H972 538 aaKnown RBP18.83■□□□□ 0.61
LIPA-202ENST00000336233 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.6
LIPA-202ENST00000336233 RICTORQ6R327 1708 aa18.83■□□□□ 0.6
LIPA-202ENST00000336233 ARHGAP31Q2M1Z3 1444 aa18.82■□□□□ 0.6
LIPA-202ENST00000336233 CARD14Q9BXL6 1004 aa18.81■□□□□ 0.6
LIPA-202ENST00000336233 NEXMIFQ5QGS0 1516 aa18.8■□□□□ 0.6
LIPA-202ENST00000336233 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
LIPA-202ENST00000336233 GLI2P10070 1586 aa18.79■□□□□ 0.6
LIPA-202ENST00000336233 TCERG1O14776 1098 aaKnown RBP18.79■□□□□ 0.6
LIPA-202ENST00000336233 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
LIPA-202ENST00000336233 POLR3AO14802 1390 aaPredicted RBP18.78■□□□□ 0.6
LIPA-202ENST00000336233 ARHGEF28Q8N1W1 1705 aaKnown RBP18.78■□□□□ 0.6
LIPA-202ENST00000336233 GOLGA2Q08379 1002 aa18.77■□□□□ 0.6
LIPA-202ENST00000336233 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
LIPA-202ENST00000336233 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
LIPA-202ENST00000336233 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
LIPA-202ENST00000336233 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
LIPA-202ENST00000336233 GGT6Q6P531 493 aa18.76■□□□□ 0.59
LIPA-202ENST00000336233 MS4A1P11836 297 aa18.76■□□□□ 0.59
LIPA-202ENST00000336233 SLFN5Q08AF3 891 aa18.75■□□□□ 0.59
LIPA-202ENST00000336233 ZFYVE9O95405 1425 aa18.75■□□□□ 0.59
LIPA-202ENST00000336233 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
LIPA-202ENST00000336233 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
LIPA-202ENST00000336233 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
LIPA-202ENST00000336233 PLIN1O60240 522 aa18.73■□□□□ 0.59
LIPA-202ENST00000336233 TULP4Q9NRJ4 1543 aa18.72■□□□□ 0.59
LIPA-202ENST00000336233 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
LIPA-202ENST00000336233 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
LIPA-202ENST00000336233 TRAK1Q9UPV9 953 aa18.7■□□□□ 0.58
LIPA-202ENST00000336233 NOP58Q9Y2X3 529 aaKnown RBP18.7■□□□□ 0.58
LIPA-202ENST00000336233 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
LIPA-202ENST00000336233 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
LIPA-202ENST00000336233 RAPGEF3O95398 923 aa18.69■□□□□ 0.58
LIPA-202ENST00000336233 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.69■□□□□ 0.58
LIPA-202ENST00000336233 NSD2O96028 1365 aa18.68■□□□□ 0.58
LIPA-202ENST00000336233 TMEM131LA2VDJ0 1609 aa18.68■□□□□ 0.58
LIPA-202ENST00000336233 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
LIPA-202ENST00000336233 KDM2BQ8NHM5 1336 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms