RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 TRIM34Q9BYJ4 488 aa14.35□□□□□ -0.11
SCN5A-202ENST00000333535 CALRP27797 417 aaKnown RBP14.35□□□□□ -0.11
SCN5A-202ENST00000333535 DIAPH3Q9NSV4 1193 aa14.34□□□□□ -0.11
SCN5A-202ENST00000333535 NAT10Q9H0A0 1025 aaKnown RBP14.34□□□□□ -0.11
SCN5A-202ENST00000333535 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
SCN5A-202ENST00000333535 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
SCN5A-202ENST00000333535 COG3Q96JB2 828 aa14.34□□□□□ -0.11
SCN5A-202ENST00000333535 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
SCN5A-202ENST00000333535 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
SCN5A-202ENST00000333535 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
SCN5A-202ENST00000333535 RRP12Q5JTH9 1297 aaKnown RBP14.33□□□□□ -0.12
SCN5A-202ENST00000333535 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
SCN5A-202ENST00000333535 CWC15Q9P013 229 aaKnown RBP14.32□□□□□ -0.12
SCN5A-202ENST00000333535 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
SCN5A-202ENST00000333535 CCDC146Q8IYE0 955 aa14.32□□□□□ -0.12
SCN5A-202ENST00000333535 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
SCN5A-202ENST00000333535 LETM1O95202 739 aaPredicted RBP14.31□□□□□ -0.12
SCN5A-202ENST00000333535 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
SCN5A-202ENST00000333535 USP47Q96K76 1375 aa14.31□□□□□ -0.12
SCN5A-202ENST00000333535 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
SCN5A-202ENST00000333535 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
SCN5A-202ENST00000333535 TRDNQ13061 729 aa14.31□□□□□ -0.12
SCN5A-202ENST00000333535 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
SCN5A-202ENST00000333535 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
SCN5A-202ENST00000333535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCN5A-202ENST00000333535 EVA1CP58658 441 aa14.3□□□□□ -0.12
SCN5A-202ENST00000333535 SASS6Q6UVJ0 657 aa14.3□□□□□ -0.12
SCN5A-202ENST00000333535 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
SCN5A-202ENST00000333535 MYO6Q9UM54 1294 aa14.3□□□□□ -0.12
SCN5A-202ENST00000333535 L3MBTL2Q969R5 705 aa14.3□□□□□ -0.12
SCN5A-202ENST00000333535 INTS3Q68E01 1043 aaKnown RBP14.3□□□□□ -0.12
SCN5A-202ENST00000333535 MCTP1Q6DN14 999 aa14.3□□□□□ -0.12
SCN5A-202ENST00000333535 DHX8Q14562 1220 aaKnown RBP14.29□□□□□ -0.12
SCN5A-202ENST00000333535 KIF21BO75037 1637 aa14.29□□□□□ -0.12
SCN5A-202ENST00000333535 TEFQ10587 303 aa14.29□□□□□ -0.12
SCN5A-202ENST00000333535 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
SCN5A-202ENST00000333535 TTC5Q8N0Z6 440 aa14.29□□□□□ -0.12
SCN5A-202ENST00000333535 HSP90B2PQ58FF3 399 aa14.28□□□□□ -0.12
SCN5A-202ENST00000333535 ERICH2A1L162 156 aa14.28□□□□□ -0.12
SCN5A-202ENST00000333535 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
SCN5A-202ENST00000333535 STAC3Q96MF2 364 aa14.28□□□□□ -0.12
SCN5A-202ENST00000333535 CTDP1Q9Y5B0 961 aaPredicted RBP14.28□□□□□ -0.12
SCN5A-202ENST00000333535 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
SCN5A-202ENST00000333535 ZNF592Q92610 1267 aa14.28□□□□□ -0.12
SCN5A-202ENST00000333535 VPS37DQ86XT2 251 aa14.27□□□□□ -0.12
SCN5A-202ENST00000333535 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.12
SCN5A-202ENST00000333535 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.12
SCN5A-202ENST00000333535 CCP110O43303 1012 aa14.27□□□□□ -0.13
SCN5A-202ENST00000333535 PCMTD1Q96MG8 357 aaPredicted RBP14.27□□□□□ -0.13
SCN5A-202ENST00000333535 RDXP35241 583 aaKnown RBP14.27□□□□□ -0.13
SCN5A-202ENST00000333535 KIF7Q2M1P5 1343 aa14.26□□□□□ -0.13
SCN5A-202ENST00000333535 CCDC39Q9UFE4 941 aa14.26□□□□□ -0.13
SCN5A-202ENST00000333535 CPLX1O14810 134 aa14.26□□□□□ -0.13
SCN5A-202ENST00000333535 ERCC4Q92889 916 aaPredicted RBP14.26□□□□□ -0.13
SCN5A-202ENST00000333535 FHOD3Q2V2M9 1422 aa14.26□□□□□ -0.13
SCN5A-202ENST00000333535 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
SCN5A-202ENST00000333535 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
SCN5A-202ENST00000333535 HSP90AB4PQ58FF6 505 aa14.25□□□□□ -0.13
SCN5A-202ENST00000333535 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
SCN5A-202ENST00000333535 CCDC173Q0VFZ6 552 aa14.25□□□□□ -0.13
SCN5A-202ENST00000333535 ERC2O15083 957 aa14.25□□□□□ -0.13
SCN5A-202ENST00000333535 SAFBQ15424 915 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCN5A-202ENST00000333535 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
SCN5A-202ENST00000333535 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
SCN5A-202ENST00000333535 PANK3Q9H999 370 aa14.24□□□□□ -0.13
SCN5A-202ENST00000333535 IFIT2P09913 472 aaKnown RBP14.24□□□□□ -0.13
SCN5A-202ENST00000333535 API5Q9BZZ5 524 aaKnown RBP14.24□□□□□ -0.13
SCN5A-202ENST00000333535 CCDC66A2RUB6 948 aa14.23□□□□□ -0.13
SCN5A-202ENST00000333535 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
SCN5A-202ENST00000333535 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
SCN5A-202ENST00000333535 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
SCN5A-202ENST00000333535 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
SCN5A-202ENST00000333535 SMC3Q9UQE7 1217 aa14.23□□□□□ -0.13
SCN5A-202ENST00000333535 ANO2Q9NQ90 1003 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 MCM2P49736 904 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 PDE4CQ08493 712 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 CCDC43Q96MW1 224 aaKnown RBP14.22□□□□□ -0.13
SCN5A-202ENST00000333535 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
SCN5A-202ENST00000333535 BRMS1Q9HCU9 246 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 TRAK1Q9UPV9 953 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 SCAPERQ9BY12 1400 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
SCN5A-202ENST00000333535 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
SCN5A-202ENST00000333535 CCDC73Q6ZRK6 1079 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 XBP1P17861 261 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 MRE11P49959 708 aa14.22□□□□□ -0.13
SCN5A-202ENST00000333535 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
SCN5A-202ENST00000333535 APPP05067 770 aa14.21□□□□□ -0.13
SCN5A-202ENST00000333535 DZIP1LQ8IYY4 767 aaKnown RBP14.21□□□□□ -0.13
SCN5A-202ENST00000333535 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.14
SCN5A-202ENST00000333535 PSMA5P28066 241 aa14.2□□□□□ -0.14
SCN5A-202ENST00000333535 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.2□□□□□ -0.14
SCN5A-202ENST00000333535 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
SCN5A-202ENST00000333535 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
SCN5A-202ENST00000333535 DHX57Q6P158 1386 aaKnown RBP14.2□□□□□ -0.14
SCN5A-202ENST00000333535 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
SCN5A-202ENST00000333535 EPS15P42566 896 aa14.2□□□□□ -0.14
SCN5A-202ENST00000333535 G3BP1Q13283 466 aaKnown RBP eCLIP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms