RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 NRXN1Q9ULB1 1477 aa32.9■■■□□ 2.86
TSEN54-201ENST00000333213 ROCK2O75116 1388 aaKnown RBP32.89■■■□□ 2.86
TSEN54-201ENST00000333213 CARD11Q9BXL7 1154 aa32.88■■■□□ 2.85
TSEN54-201ENST00000333213 GPRASP1Q5JY77 1395 aa32.86■■■□□ 2.85
TSEN54-201ENST00000333213 A2ML1A8K2U0 1454 aa32.86■■■□□ 2.85
TSEN54-201ENST00000333213 RIMS1Q86UR5 1692 aaKnown RBP32.85■■■□□ 2.85
TSEN54-201ENST00000333213 USP47Q96K76 1375 aa32.84■■■□□ 2.85
TSEN54-201ENST00000333213 NUTM2DQ5VT03 806 aaPredicted RBP32.84■■■□□ 2.85
TSEN54-201ENST00000333213 PLPPR3Q6T4P5 718 aa32.84■■■□□ 2.85
TSEN54-201ENST00000333213 STAG3Q9UJ98 1225 aa32.81■■■□□ 2.84
TSEN54-201ENST00000333213 PIK3C2GO75747 1445 aa32.8■■■□□ 2.84
TSEN54-201ENST00000333213 CFAP70Q5T0N1 1121 aa32.79■■■□□ 2.84
TSEN54-201ENST00000333213 LAMC1P11047 1609 aa32.77■■■□□ 2.84
TSEN54-201ENST00000333213 KIAA1210Q9ULL0 1709 aa32.77■■■□□ 2.84
TSEN54-201ENST00000333213 ZFYVE9O95405 1425 aa32.76■■■□□ 2.83
TSEN54-201ENST00000333213 VGFO15240 615 aaPredicted RBP32.76■■■□□ 2.83
TSEN54-201ENST00000333213 DIEXFQ68CQ4 756 aaKnown RBP32.76■■■□□ 2.83
TSEN54-201ENST00000333213 NLRP1Q9C000 1473 aa32.74■■■□□ 2.83
TSEN54-201ENST00000333213 UBR1Q8IWV7 1749 aa32.73■■■□□ 2.83
TSEN54-201ENST00000333213 KDM5AP29375 1690 aaKnown RBP32.72■■■□□ 2.83
TSEN54-201ENST00000333213 C11orf95C9JLR9 678 aaPredicted RBP32.71■■■□□ 2.83
TSEN54-201ENST00000333213 C14orf93Q9H972 538 aaKnown RBP32.7■■■□□ 2.83
TSEN54-201ENST00000333213 ST20-MTHFSA0A0A6YYL1 179 aa32.69■■■□□ 2.82
TSEN54-201ENST00000333213 RIMS2Q9UQ26 1411 aa32.69■■■□□ 2.82
TSEN54-201ENST00000333213 MYO3AQ8NEV4 1616 aa32.65■■■□□ 2.82
TSEN54-201ENST00000333213 WASHC2AQ641Q2 1341 aa32.65■■■□□ 2.82
TSEN54-201ENST00000333213 IQGAP1P46940 1657 aa32.64■■■□□ 2.82
TSEN54-201ENST00000333213 SENP3Q9H4L4 574 aaPredicted RBP32.64■■■□□ 2.82
TSEN54-201ENST00000333213 ADGRB1O14514 1584 aa32.63■■■□□ 2.81
TSEN54-201ENST00000333213 TMEM2Q9UHN6 1383 aa32.62■■■□□ 2.81
TSEN54-201ENST00000333213 SETBP1Q9Y6X0 1596 aa32.62■■■□□ 2.81
TSEN54-201ENST00000333213 SCAF11Q99590 1463 aaKnown RBP32.61■■■□□ 2.81
TSEN54-201ENST00000333213 PTPRMP28827 1452 aa32.61■■■□□ 2.81
TSEN54-201ENST00000333213 TMEM132EQ6IEE7 984 aa32.59■■■□□ 2.81
TSEN54-201ENST00000333213 DDX10Q13206 875 aaKnown RBP32.58■■■□□ 2.81
TSEN54-201ENST00000333213 CCDC7Q96M83 1385 aa32.55■■■□□ 2.8
TSEN54-201ENST00000333213 KIF7Q2M1P5 1343 aa32.55■■■□□ 2.8
TSEN54-201ENST00000333213 TESK2Q96S53 571 aa32.55■■■□□ 2.8
TSEN54-201ENST00000333213 ASXL1Q8IXJ9 1541 aa32.54■■■□□ 2.8
TSEN54-201ENST00000333213 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.54■■■□□ 2.8
TSEN54-201ENST00000333213 CEP170BQ9Y4F5 1589 aaPredicted RBP32.54■■■□□ 2.8
TSEN54-201ENST00000333213 LTKP29376 864 aa32.53■■■□□ 2.8
TSEN54-201ENST00000333213 ALKQ9UM73 1620 aa32.53■■■□□ 2.8
TSEN54-201ENST00000333213 POLR1AO95602 1720 aaPredicted RBP32.52■■■□□ 2.8
TSEN54-201ENST00000333213 SCAF1Q9H7N4 1312 aaKnown RBP32.52■■■□□ 2.8
TSEN54-201ENST00000333213 ARHGAP23Q9P227 1491 aa32.51■■■□□ 2.8
TSEN54-201ENST00000333213 NRXN3Q9Y4C0 1643 aa32.51■■■□□ 2.8
TSEN54-201ENST00000333213 SLIT1O75093 1534 aa32.51■■■□□ 2.8
TSEN54-201ENST00000333213 HDGFP51858 240 aaKnown RBP32.48■■■□□ 2.79
TSEN54-201ENST00000333213 THEMISQ8N1K5 641 aaPredicted RBP32.48■■■□□ 2.79
TSEN54-201ENST00000333213 SETD1BQ9UPS6 1966 aaKnown RBP32.48■■■□□ 2.79
TSEN54-201ENST00000333213 SETD1AO15047 1707 aaKnown RBP32.47■■■□□ 2.79
TSEN54-201ENST00000333213 TRAK1Q9UPV9 953 aa32.46■■■□□ 2.79
TSEN54-201ENST00000333213 PELP1Q8IZL8 1130 aaKnown RBP32.45■■■□□ 2.79
TSEN54-201ENST00000333213 ZNF142P52746 1687 aaPredicted RBP32.45■■■□□ 2.79
TSEN54-201ENST00000333213 TXNDC2Q86VQ3 553 aa32.45■■■□□ 2.78
TSEN54-201ENST00000333213 KDM4FA0A1W2PPD8 638 aa32.43■■■□□ 2.78
TSEN54-201ENST00000333213 EIF3AQ14152 1382 aaKnown RBP32.43■■■□□ 2.78
TSEN54-201ENST00000333213 DISP3Q9P2K9 1392 aa32.42■■■□□ 2.78
TSEN54-201ENST00000333213 PLEKHG1Q9ULL1 1385 aa32.4■■■□□ 2.78
TSEN54-201ENST00000333213 EID1Q9Y6B2 187 aa32.38■■■□□ 2.77
TSEN54-201ENST00000333213 ADAMTS13Q76LX8 1427 aa32.38■■■□□ 2.77
TSEN54-201ENST00000333213 YTHDC2Q9H6S0 1430 aaKnown RBP32.37■■■□□ 2.77
TSEN54-201ENST00000333213 METP08581 1390 aa32.37■■■□□ 2.77
TSEN54-201ENST00000333213 ARHGEF28Q8N1W1 1705 aaKnown RBP32.36■■■□□ 2.77
TSEN54-201ENST00000333213 MIER1Q8N108 512 aa32.36■■■□□ 2.77
TSEN54-201ENST00000333213 STK26Q9P289 416 aa32.36■■■□□ 2.77
TSEN54-201ENST00000333213 POLR3GLQ9BT43 218 aa32.36■■■□□ 2.77
TSEN54-201ENST00000333213 CENPJQ9HC77 1338 aaPredicted RBP32.34■■■□□ 2.77
TSEN54-201ENST00000333213 TMF1P82094 1093 aa32.34■■■□□ 2.77
TSEN54-201ENST00000333213 BCANQ96GW7 911 aa32.32■■■□□ 2.76
TSEN54-201ENST00000333213 MED14O60244 1454 aa32.31■■■□□ 2.76
TSEN54-201ENST00000333213 SBNO2Q9Y2G9 1366 aa32.3■■■□□ 2.76
TSEN54-201ENST00000333213 QRICH2Q9H0J4 1663 aa32.28■■■□□ 2.76
TSEN54-201ENST00000333213 LRPPRCP42704 1394 aaKnown RBP32.28■■■□□ 2.76
TSEN54-201ENST00000333213 SLC26A8Q96RN1 970 aa32.28■■■□□ 2.76
TSEN54-201ENST00000333213 CENPBP07199 599 aaPredicted RBP32.26■■■□□ 2.76
TSEN54-201ENST00000333213 ABCC11Q96J66 1382 aa32.24■■■□□ 2.75
TSEN54-201ENST00000333213 ANKLE2Q86XL3 938 aa32.23■■■□□ 2.75
TSEN54-201ENST00000333213 PRAM1Q96QH2 718 aa32.22■■■□□ 2.75
TSEN54-201ENST00000333213 DLC1Q96QB1 1528 aa32.21■■■□□ 2.75
TSEN54-201ENST00000333213 SAFB2Q14151 953 aaKnown RBP eCLIP32.21■■■□□ 2.75
TSEN54-201ENST00000333213 TBX22Q9Y458 520 aa32.2■■■□□ 2.74
TSEN54-201ENST00000333213 SLC24A1O60721 1099 aa32.18■■■□□ 2.74
TSEN54-201ENST00000333213 TECPR2O15040 1411 aa32.17■■■□□ 2.74
TSEN54-201ENST00000333213 PTPRUQ92729 1446 aa32.17■■■□□ 2.74
TSEN54-201ENST00000333213 PLEKHH1Q9ULM0 1364 aa32.17■■■□□ 2.74
TSEN54-201ENST00000333213 WAPLQ7Z5K2 1190 aa32.16■■■□□ 2.74
TSEN54-201ENST00000333213 KNDC1Q76NI1 1749 aa32.15■■■□□ 2.74
TSEN54-201ENST00000333213 DIP2AQ14689 1571 aa32.14■■■□□ 2.74
TSEN54-201ENST00000333213 CDCA8Q53HL2 280 aa32.14■■■□□ 2.74
TSEN54-201ENST00000333213 POGKQ9P215 609 aa32.14■■■□□ 2.74
TSEN54-201ENST00000333213 TULP4Q9NRJ4 1543 aa32.14■■■□□ 2.74
TSEN54-201ENST00000333213 CPS1P31327 1500 aa32.12■■■□□ 2.73
TSEN54-201ENST00000333213 MINK1Q8N4C8 1332 aaPredicted RBP32.1■■■□□ 2.73
TSEN54-201ENST00000333213 ROBO2Q9HCK4 1378 aa32.1■■■□□ 2.73
TSEN54-201ENST00000333213 MYOM1P52179 1685 aa32.09■■■□□ 2.73
TSEN54-201ENST00000333213 SIRT1Q96EB6 747 aa32.09■■■□□ 2.73
TSEN54-201ENST00000333213 NCKAP5LQ9HCH0 1330 aa32.09■■■□□ 2.73
TSEN54-201ENST00000333213 FAM135BQ49AJ0 1406 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms