RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
PRKCH-201ENST00000332981 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
PRKCH-201ENST00000332981 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
PRKCH-201ENST00000332981 E9PSI1 815 aa17.16■□□□□ 0.34
PRKCH-201ENST00000332981 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
PRKCH-201ENST00000332981 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
PRKCH-201ENST00000332981 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
PRKCH-201ENST00000332981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRKCH-201ENST00000332981 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 SAMD9Q5K651 1589 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 WDR62O43379 1518 aa17.14■□□□□ 0.33
PRKCH-201ENST00000332981 FOXD4L5Q5VV16 416 aaPredicted RBP17.13■□□□□ 0.33
PRKCH-201ENST00000332981 FOXD4L4Q8WXT5 416 aaPredicted RBP17.13■□□□□ 0.33
PRKCH-201ENST00000332981 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
PRKCH-201ENST00000332981 RLBP1P12271 317 aa17.13■□□□□ 0.33
PRKCH-201ENST00000332981 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
PRKCH-201ENST00000332981 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
PRKCH-201ENST00000332981 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
PRKCH-201ENST00000332981 PCDHB15Q9Y5E8 787 aa17.11■□□□□ 0.33
PRKCH-201ENST00000332981 KIF14Q15058 1648 aa17.11■□□□□ 0.33
PRKCH-201ENST00000332981 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
PRKCH-201ENST00000332981 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
PRKCH-201ENST00000332981 DISP1Q96F81 1524 aa17.09■□□□□ 0.33
PRKCH-201ENST00000332981 RALGAPBQ86X10 1494 aa17.09■□□□□ 0.33
PRKCH-201ENST00000332981 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
PRKCH-201ENST00000332981 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.33
PRKCH-201ENST00000332981 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.33
PRKCH-201ENST00000332981 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.33
PRKCH-201ENST00000332981 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.33
PRKCH-201ENST00000332981 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.32
PRKCH-201ENST00000332981 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
PRKCH-201ENST00000332981 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
PRKCH-201ENST00000332981 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
PRKCH-201ENST00000332981 MLECQ14165 292 aa17.07■□□□□ 0.32
PRKCH-201ENST00000332981 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
PRKCH-201ENST00000332981 HMOX1P09601 288 aa17.07■□□□□ 0.32
PRKCH-201ENST00000332981 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
PRKCH-201ENST00000332981 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
PRKCH-201ENST00000332981 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
PRKCH-201ENST00000332981 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
PRKCH-201ENST00000332981 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
PRKCH-201ENST00000332981 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
PRKCH-201ENST00000332981 GCC2Q8IWJ2 1684 aa17.05■□□□□ 0.32
PRKCH-201ENST00000332981 PKNOX2Q96KN3 472 aa17.05■□□□□ 0.32
PRKCH-201ENST00000332981 GOLGA6L3A6NEY3 463 aa17.04■□□□□ 0.32
PRKCH-201ENST00000332981 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
PRKCH-201ENST00000332981 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
PRKCH-201ENST00000332981 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
PRKCH-201ENST00000332981 ATP10BO94823 1461 aa17.04■□□□□ 0.32
PRKCH-201ENST00000332981 DNMT1P26358 1616 aaKnown RBP17.04■□□□□ 0.32
PRKCH-201ENST00000332981 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
PRKCH-201ENST00000332981 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
PRKCH-201ENST00000332981 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
PRKCH-201ENST00000332981 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
PRKCH-201ENST00000332981 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
PRKCH-201ENST00000332981 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
PRKCH-201ENST00000332981 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
PRKCH-201ENST00000332981 RAPGEF6Q8TEU7 1601 aa17.01■□□□□ 0.31
PRKCH-201ENST00000332981 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
PRKCH-201ENST00000332981 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
PRKCH-201ENST00000332981 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
PRKCH-201ENST00000332981 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
PRKCH-201ENST00000332981 RIPK4P57078 832 aa17■□□□□ 0.31
PRKCH-201ENST00000332981 KDM5CP41229 1560 aa17■□□□□ 0.31
PRKCH-201ENST00000332981 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
PRKCH-201ENST00000332981 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
PRKCH-201ENST00000332981 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
PRKCH-201ENST00000332981 A2MP01023 1474 aa16.98■□□□□ 0.31
PRKCH-201ENST00000332981 KANK1Q14678 1352 aa16.98■□□□□ 0.31
PRKCH-201ENST00000332981 WASHC2CQ9Y4E1 1318 aa16.97■□□□□ 0.31
PRKCH-201ENST00000332981 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKCH-201ENST00000332981 KIAA0556O60303 1618 aa16.97■□□□□ 0.31
PRKCH-201ENST00000332981 MPNDQ8N594 471 aa16.96■□□□□ 0.31
PRKCH-201ENST00000332981 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.31
PRKCH-201ENST00000332981 SCAPERQ9BY12 1400 aa16.95■□□□□ 0.3
PRKCH-201ENST00000332981 MAGI2Q86UL8 1455 aa16.95■□□□□ 0.3
PRKCH-201ENST00000332981 TRAK2O60296 914 aa16.95■□□□□ 0.3
PRKCH-201ENST00000332981 UBE2Q2Q8WVN8 375 aa16.95■□□□□ 0.3
PRKCH-201ENST00000332981 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
PRKCH-201ENST00000332981 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
PRKCH-201ENST00000332981 A0A0U1RQG5 324 aaPredicted RBP16.94■□□□□ 0.3
PRKCH-201ENST00000332981 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
PRKCH-201ENST00000332981 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
PRKCH-201ENST00000332981 SSH1Q8WYL5 1049 aa16.94■□□□□ 0.3
PRKCH-201ENST00000332981 EIF3AQ14152 1382 aaKnown RBP16.94■□□□□ 0.3
PRKCH-201ENST00000332981 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
PRKCH-201ENST00000332981 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
PRKCH-201ENST00000332981 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
PRKCH-201ENST00000332981 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
PRKCH-201ENST00000332981 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
PRKCH-201ENST00000332981 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
PRKCH-201ENST00000332981 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
PRKCH-201ENST00000332981 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
PRKCH-201ENST00000332981 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
PRKCH-201ENST00000332981 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
PRKCH-201ENST00000332981 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms