RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 IQGAP3Q86VI3 1631 aa14.49□□□□□ -0.09
SYN3-201ENST00000332840 ACIN1Q9UKV3 1341 aaKnown RBP14.49□□□□□ -0.09
SYN3-201ENST00000332840 IDI1Q13907 227 aa14.49□□□□□ -0.09
SYN3-201ENST00000332840 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
SYN3-201ENST00000332840 ARHGAP23Q9P227 1491 aa14.49□□□□□ -0.09
SYN3-201ENST00000332840 SYNMO15061 1565 aa14.47□□□□□ -0.09
SYN3-201ENST00000332840 KDM5AP29375 1690 aaKnown RBP14.47□□□□□ -0.09
SYN3-201ENST00000332840 TXNDC2Q86VQ3 553 aa14.47□□□□□ -0.09
SYN3-201ENST00000332840 ADGRB3O60242 1522 aa14.46□□□□□ -0.09
SYN3-201ENST00000332840 HDGFP51858 240 aaKnown RBP14.46□□□□□ -0.09
SYN3-201ENST00000332840 GCC2Q8IWJ2 1684 aa14.46□□□□□ -0.1
SYN3-201ENST00000332840 UBR1Q8IWV7 1749 aa14.45□□□□□ -0.1
SYN3-201ENST00000332840 PIK3C2BO00750 1634 aa14.44□□□□□ -0.1
SYN3-201ENST00000332840 HRCP23327 699 aa14.42□□□□□ -0.1
SYN3-201ENST00000332840 LTKP29376 864 aa14.42□□□□□ -0.1
SYN3-201ENST00000332840 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
SYN3-201ENST00000332840 TRIM52Q96A61 297 aa14.42□□□□□ -0.1
SYN3-201ENST00000332840 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.41□□□□□ -0.1
SYN3-201ENST00000332840 SETD1AO15047 1707 aaKnown RBP14.41□□□□□ -0.1
SYN3-201ENST00000332840 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
SYN3-201ENST00000332840 E9PCH4 1651 aa14.39□□□□□ -0.11
SYN3-201ENST00000332840 PPP1R15AO75807 674 aaPredicted RBP14.39□□□□□ -0.11
SYN3-201ENST00000332840 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
SYN3-201ENST00000332840 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
SYN3-201ENST00000332840 ZFYVE9O95405 1425 aa14.38□□□□□ -0.11
SYN3-201ENST00000332840 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
SYN3-201ENST00000332840 RIMS2Q9UQ26 1411 aa14.37□□□□□ -0.11
SYN3-201ENST00000332840 TRPM2O94759 1503 aa14.36□□□□□ -0.11
SYN3-201ENST00000332840 TMEM131LA2VDJ0 1609 aa14.35□□□□□ -0.11
SYN3-201ENST00000332840 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
SYN3-201ENST00000332840 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
SYN3-201ENST00000332840 BCANQ96GW7 911 aa14.34□□□□□ -0.11
SYN3-201ENST00000332840 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
SYN3-201ENST00000332840 RGS17Q9UGC6 210 aaPredicted RBP14.33□□□□□ -0.12
SYN3-201ENST00000332840 MYO5BQ9ULV0 1848 aa14.33□□□□□ -0.12
SYN3-201ENST00000332840 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
SYN3-201ENST00000332840 KCNA6P17658 529 aa14.31□□□□□ -0.12
SYN3-201ENST00000332840 ZNF326Q5BKZ1 582 aaKnown RBP14.31□□□□□ -0.12
SYN3-201ENST00000332840 CCER1Q8TC90 406 aaPredicted RBP14.31□□□□□ -0.12
SYN3-201ENST00000332840 SLC26A8Q96RN1 970 aa14.31□□□□□ -0.12
SYN3-201ENST00000332840 SPHKAPQ2M3C7 1700 aa14.3□□□□□ -0.12
SYN3-201ENST00000332840 MPHOSPH9Q99550 1183 aa14.3□□□□□ -0.12
SYN3-201ENST00000332840 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
SYN3-201ENST00000332840 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
SYN3-201ENST00000332840 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
SYN3-201ENST00000332840 NKTRP30414 1462 aaKnown RBP14.29□□□□□ -0.12
SYN3-201ENST00000332840 CCDC144AA2RUR9 1427 aa14.28□□□□□ -0.12
SYN3-201ENST00000332840 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
SYN3-201ENST00000332840 DIP2AQ14689 1571 aa14.28□□□□□ -0.12
SYN3-201ENST00000332840 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
SYN3-201ENST00000332840 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.12
SYN3-201ENST00000332840 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.12
SYN3-201ENST00000332840 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
SYN3-201ENST00000332840 CLTCL1P53675 1640 aa14.26□□□□□ -0.13
SYN3-201ENST00000332840 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
SYN3-201ENST00000332840 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
SYN3-201ENST00000332840 TMEM94Q12767 1356 aa14.24□□□□□ -0.13
SYN3-201ENST00000332840 PROSER2Q86WR7 435 aaPredicted RBP14.24□□□□□ -0.13
SYN3-201ENST00000332840 NWD1Q149M9 1564 aa14.24□□□□□ -0.13
SYN3-201ENST00000332840 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
SYN3-201ENST00000332840 NCOA3Q9Y6Q9 1424 aa14.23□□□□□ -0.13
SYN3-201ENST00000332840 SETBP1Q9Y6X0 1596 aa14.22□□□□□ -0.13
SYN3-201ENST00000332840 NEXMIFQ5QGS0 1516 aa14.2□□□□□ -0.14
SYN3-201ENST00000332840 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
SYN3-201ENST00000332840 MSH6P52701 1360 aa14.2□□□□□ -0.14
SYN3-201ENST00000332840 ANKRD30BQ9BXX2 1392 aa14.2□□□□□ -0.14
SYN3-201ENST00000332840 SPATA31E1Q6ZUB1 1445 aa14.17□□□□□ -0.14
SYN3-201ENST00000332840 AMOTL2Q9Y2J4 779 aa14.17□□□□□ -0.14
SYN3-201ENST00000332840 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
SYN3-201ENST00000332840 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
SYN3-201ENST00000332840 KIF1BO60333 1816 aa14.16□□□□□ -0.14
SYN3-201ENST00000332840 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
SYN3-201ENST00000332840 C14orf37Q86TY3 774 aa14.16□□□□□ -0.14
SYN3-201ENST00000332840 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
SYN3-201ENST00000332840 METP08581 1390 aa14.14□□□□□ -0.15
SYN3-201ENST00000332840 RGL3Q3MIN7 710 aa14.14□□□□□ -0.15
SYN3-201ENST00000332840 CADPS2Q86UW7 1296 aa14.13□□□□□ -0.15
SYN3-201ENST00000332840 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
SYN3-201ENST00000332840 COL16A1Q07092 1604 aaPredicted RBP14.12□□□□□ -0.15
SYN3-201ENST00000332840 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
SYN3-201ENST00000332840 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
SYN3-201ENST00000332840 DCCP43146 1447 aa14.12□□□□□ -0.15
SYN3-201ENST00000332840 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
SYN3-201ENST00000332840 PTPRUQ92729 1446 aa14.12□□□□□ -0.15
SYN3-201ENST00000332840 ATF3P18847 181 aa14.11□□□□□ -0.15
SYN3-201ENST00000332840 PTCH1Q13635 1447 aa14.11□□□□□ -0.15
SYN3-201ENST00000332840 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.11□□□□□ -0.15
SYN3-201ENST00000332840 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
SYN3-201ENST00000332840 XRN1Q8IZH2 1706 aaKnown RBP14.1□□□□□ -0.15
SYN3-201ENST00000332840 LRP6O75581 1613 aa14.09□□□□□ -0.15
SYN3-201ENST00000332840 MYOM2P54296 1465 aa14.09□□□□□ -0.15
SYN3-201ENST00000332840 ADGRF5Q8IZF2 1346 aa14.09□□□□□ -0.15
SYN3-201ENST00000332840 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
SYN3-201ENST00000332840 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
SYN3-201ENST00000332840 ADGRL3Q9HAR2 1447 aa14.07□□□□□ -0.16
SYN3-201ENST00000332840 PPLO60437 1756 aa14.06□□□□□ -0.16
SYN3-201ENST00000332840 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
SYN3-201ENST00000332840 JCADQ9P266 1359 aa14.06□□□□□ -0.16
SYN3-201ENST00000332840 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
SYN3-201ENST00000332840 LRPPRCP42704 1394 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms