RNA–Protein interactions for RNA: ENST00000332695.11

CMTM1-202, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-202ENST00000332695 ARHGAP23Q9P227 1491 aa20.39■□□□□ 0.85
CMTM1-202ENST00000332695 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.85
CMTM1-202ENST00000332695 RIMS2Q9UQ26 1411 aa20.39■□□□□ 0.85
CMTM1-202ENST00000332695 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
CMTM1-202ENST00000332695 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
CMTM1-202ENST00000332695 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
CMTM1-202ENST00000332695 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
CMTM1-202ENST00000332695 SCAF11Q99590 1463 aaKnown RBP20.37■□□□□ 0.85
CMTM1-202ENST00000332695 SIN3AQ96ST3 1273 aa20.36■□□□□ 0.85
CMTM1-202ENST00000332695 POLR1AO95602 1720 aaPredicted RBP20.35■□□□□ 0.85
CMTM1-202ENST00000332695 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
CMTM1-202ENST00000332695 BCANQ96GW7 911 aa20.34■□□□□ 0.85
CMTM1-202ENST00000332695 NCKAP5LQ9HCH0 1330 aa20.33■□□□□ 0.85
CMTM1-202ENST00000332695 LTKP29376 864 aa20.32■□□□□ 0.84
CMTM1-202ENST00000332695 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
CMTM1-202ENST00000332695 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
CMTM1-202ENST00000332695 MED14O60244 1454 aa20.3■□□□□ 0.84
CMTM1-202ENST00000332695 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
CMTM1-202ENST00000332695 PPLO60437 1756 aa20.3■□□□□ 0.84
CMTM1-202ENST00000332695 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
CMTM1-202ENST00000332695 STRCQ7RTU9 1775 aa20.29■□□□□ 0.84
CMTM1-202ENST00000332695 NUTM2DQ5VT03 806 aaPredicted RBP20.29■□□□□ 0.84
CMTM1-202ENST00000332695 DCAF11Q8TEB1 546 aa20.29■□□□□ 0.84
CMTM1-202ENST00000332695 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
CMTM1-202ENST00000332695 IQGAP1P46940 1657 aa20.26■□□□□ 0.83
CMTM1-202ENST00000332695 IFT172Q9UG01 1749 aa20.26■□□□□ 0.83
CMTM1-202ENST00000332695 MYOM2P54296 1465 aa20.25■□□□□ 0.83
CMTM1-202ENST00000332695 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
CMTM1-202ENST00000332695 L3MBTL2Q969R5 705 aa20.24■□□□□ 0.83
CMTM1-202ENST00000332695 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
CMTM1-202ENST00000332695 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
CMTM1-202ENST00000332695 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
CMTM1-202ENST00000332695 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
CMTM1-202ENST00000332695 SLC26A8Q96RN1 970 aa20.19■□□□□ 0.82
CMTM1-202ENST00000332695 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
CMTM1-202ENST00000332695 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
CMTM1-202ENST00000332695 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CMTM1-202ENST00000332695 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
CMTM1-202ENST00000332695 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
CMTM1-202ENST00000332695 LAMC1P11047 1609 aa20.15■□□□□ 0.82
CMTM1-202ENST00000332695 C14orf93Q9H972 538 aaKnown RBP20.14■□□□□ 0.81
CMTM1-202ENST00000332695 ALKQ9UM73 1620 aa20.13■□□□□ 0.81
CMTM1-202ENST00000332695 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
CMTM1-202ENST00000332695 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
CMTM1-202ENST00000332695 KCNA6P17658 529 aa20.1■□□□□ 0.81
CMTM1-202ENST00000332695 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
CMTM1-202ENST00000332695 KIAA1210Q9ULL0 1709 aa20.09■□□□□ 0.81
CMTM1-202ENST00000332695 METP08581 1390 aa20.08■□□□□ 0.8
CMTM1-202ENST00000332695 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
CMTM1-202ENST00000332695 ZNF335Q9H4Z2 1342 aaPredicted RBP20.05■□□□□ 0.8
CMTM1-202ENST00000332695 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
CMTM1-202ENST00000332695 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
CMTM1-202ENST00000332695 CPS1P31327 1500 aa20.03■□□□□ 0.8
CMTM1-202ENST00000332695 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
CMTM1-202ENST00000332695 ROCK2O75116 1388 aaKnown RBP20.03■□□□□ 0.8
CMTM1-202ENST00000332695 NKTRP30414 1462 aaKnown RBP20.03■□□□□ 0.8
CMTM1-202ENST00000332695 NBPF8Q3BBV2 869 aa20.02■□□□□ 0.8
CMTM1-202ENST00000332695 LRPPRCP42704 1394 aaKnown RBP20.02■□□□□ 0.8
CMTM1-202ENST00000332695 NWD1Q149M9 1564 aa20.02■□□□□ 0.8
CMTM1-202ENST00000332695 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.79
CMTM1-202ENST00000332695 STK26Q9P289 416 aa20.01■□□□□ 0.79
CMTM1-202ENST00000332695 TRPM1Q7Z4N2 1603 aa20.01■□□□□ 0.79
CMTM1-202ENST00000332695 ABCC11Q96J66 1382 aa20■□□□□ 0.79
CMTM1-202ENST00000332695 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
CMTM1-202ENST00000332695 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
CMTM1-202ENST00000332695 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
CMTM1-202ENST00000332695 PTPRUQ92729 1446 aa19.99■□□□□ 0.79
CMTM1-202ENST00000332695 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
CMTM1-202ENST00000332695 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
CMTM1-202ENST00000332695 SIRT1Q96EB6 747 aa19.98■□□□□ 0.79
CMTM1-202ENST00000332695 XRN1Q8IZH2 1706 aaKnown RBP19.98■□□□□ 0.79
CMTM1-202ENST00000332695 TECPR2O15040 1411 aa19.97■□□□□ 0.79
CMTM1-202ENST00000332695 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
CMTM1-202ENST00000332695 CARD11Q9BXL7 1154 aa19.97■□□□□ 0.79
CMTM1-202ENST00000332695 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
CMTM1-202ENST00000332695 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
CMTM1-202ENST00000332695 GPRASP1Q5JY77 1395 aa19.95■□□□□ 0.79
CMTM1-202ENST00000332695 LTBP4Q8N2S1 1624 aa19.95■□□□□ 0.78
CMTM1-202ENST00000332695 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
CMTM1-202ENST00000332695 POGKQ9P215 609 aa19.95■□□□□ 0.78
CMTM1-202ENST00000332695 TRAK1Q9UPV9 953 aa19.95■□□□□ 0.78
CMTM1-202ENST00000332695 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
CMTM1-202ENST00000332695 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
CMTM1-202ENST00000332695 NCOA3Q9Y6Q9 1424 aa19.94■□□□□ 0.78
CMTM1-202ENST00000332695 DLC1Q96QB1 1528 aa19.94■□□□□ 0.78
CMTM1-202ENST00000332695 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
CMTM1-202ENST00000332695 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
CMTM1-202ENST00000332695 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
CMTM1-202ENST00000332695 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
CMTM1-202ENST00000332695 PRAM1Q96QH2 718 aa19.9■□□□□ 0.78
CMTM1-202ENST00000332695 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
CMTM1-202ENST00000332695 CERKQ8TCT0 537 aa19.89■□□□□ 0.77
CMTM1-202ENST00000332695 MSH6P52701 1360 aa19.88■□□□□ 0.77
CMTM1-202ENST00000332695 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
CMTM1-202ENST00000332695 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
CMTM1-202ENST00000332695 C19orf44Q9H6X5 657 aa19.87■□□□□ 0.77
CMTM1-202ENST00000332695 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
CMTM1-202ENST00000332695 ARHGEF28Q8N1W1 1705 aaKnown RBP19.86■□□□□ 0.77
CMTM1-202ENST00000332695 ATF3P18847 181 aa19.84■□□□□ 0.77
CMTM1-202ENST00000332695 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms