RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SCAF11Q99590 1463 aaKnown RBP37.89■■■■□ 3.66
SMDT1-201ENST00000331479 NEURL4Q96JN8 1562 aa37.89■■■■□ 3.66
SMDT1-201ENST00000331479 EID1Q9Y6B2 187 aa37.89■■■■□ 3.66
SMDT1-201ENST00000331479 NUTM2DQ5VT03 806 aaPredicted RBP37.88■■■■□ 3.65
SMDT1-201ENST00000331479 SIN3AQ96ST3 1273 aa37.86■■■■□ 3.65
SMDT1-201ENST00000331479 NEXMIFQ5QGS0 1516 aa37.85■■■■□ 3.65
SMDT1-201ENST00000331479 MED14O60244 1454 aa37.82■■■■□ 3.65
SMDT1-201ENST00000331479 HDGFP51858 240 aaKnown RBP37.8■■■■□ 3.64
SMDT1-201ENST00000331479 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.8■■■■□ 3.64
SMDT1-201ENST00000331479 NPHP4O75161 1426 aaPredicted RBP37.79■■■■□ 3.64
SMDT1-201ENST00000331479 PPP1R15AO75807 674 aaPredicted RBP37.78■■■■□ 3.64
SMDT1-201ENST00000331479 RPGRIP1LQ68CZ1 1315 aa37.78■■■■□ 3.64
SMDT1-201ENST00000331479 SENP3Q9H4L4 574 aaPredicted RBP37.77■■■■□ 3.64
SMDT1-201ENST00000331479 NEUROD1Q13562 356 aa37.76■■■■□ 3.64
SMDT1-201ENST00000331479 PPLO60437 1756 aa37.76■■■■□ 3.64
SMDT1-201ENST00000331479 DMRT2Q9Y5R5 561 aa37.76■■■■□ 3.63
SMDT1-201ENST00000331479 IQGAP1P46940 1657 aa37.75■■■■□ 3.63
SMDT1-201ENST00000331479 IFT172Q9UG01 1749 aa37.73■■■■□ 3.63
SMDT1-201ENST00000331479 PLEKHG1Q9ULL1 1385 aa37.72■■■■□ 3.63
SMDT1-201ENST00000331479 CCER1Q8TC90 406 aaPredicted RBP37.69■■■■□ 3.62
SMDT1-201ENST00000331479 VGFO15240 615 aaPredicted RBP37.68■■■■□ 3.62
SMDT1-201ENST00000331479 BCANQ96GW7 911 aa37.67■■■■□ 3.62
SMDT1-201ENST00000331479 SLC26A8Q96RN1 970 aa37.64■■■■□ 3.62
SMDT1-201ENST00000331479 ADGRF5Q8IZF2 1346 aa37.64■■■■□ 3.62
SMDT1-201ENST00000331479 DCAF11Q8TEB1 546 aa37.63■■■■□ 3.61
SMDT1-201ENST00000331479 CLSPNQ9HAW4 1339 aa37.61■■■■□ 3.61
SMDT1-201ENST00000331479 NRXN3Q9Y4C0 1643 aa37.61■■■■□ 3.61
SMDT1-201ENST00000331479 ADAMTS13Q76LX8 1427 aa37.6■■■■□ 3.61
SMDT1-201ENST00000331479 KDM2AQ9Y2K7 1162 aa37.59■■■■□ 3.61
SMDT1-201ENST00000331479 SETBP1Q9Y6X0 1596 aa37.59■■■■□ 3.61
SMDT1-201ENST00000331479 MYOM2P54296 1465 aa37.58■■■■□ 3.61
SMDT1-201ENST00000331479 L3MBTL2Q969R5 705 aa37.58■■■■□ 3.61
SMDT1-201ENST00000331479 NRXN1Q9ULB1 1477 aa37.54■■■■□ 3.6
SMDT1-201ENST00000331479 TBX22Q9Y458 520 aa37.52■■■■□ 3.6
SMDT1-201ENST00000331479 PIK3C2GO75747 1445 aa37.51■■■■□ 3.6
SMDT1-201ENST00000331479 ZNF335Q9H4Z2 1342 aaPredicted RBP37.5■■■■□ 3.59
SMDT1-201ENST00000331479 DIP2AQ14689 1571 aa37.49■■■■□ 3.59
SMDT1-201ENST00000331479 STAC3Q96MF2 364 aa37.48■■■■□ 3.59
SMDT1-201ENST00000331479 ALKQ9UM73 1620 aa37.47■■■■□ 3.59
SMDT1-201ENST00000331479 TONSLQ96HA7 1378 aa37.47■■■■□ 3.59
SMDT1-201ENST00000331479 SETD1AO15047 1707 aaKnown RBP37.45■■■■□ 3.59
SMDT1-201ENST00000331479 METP08581 1390 aa37.43■■■■□ 3.58
SMDT1-201ENST00000331479 STRCP1A6NGW2 1772 aa37.41■■■■□ 3.58
SMDT1-201ENST00000331479 CFAP70Q5T0N1 1121 aa37.39■■■■□ 3.58
SMDT1-201ENST00000331479 C14orf93Q9H972 538 aaKnown RBP37.39■■■■□ 3.58
SMDT1-201ENST00000331479 PRAG1Q86YV5 1406 aa37.37■■■■□ 3.57
SMDT1-201ENST00000331479 LTBP4Q8N2S1 1624 aa37.37■■■■□ 3.57
SMDT1-201ENST00000331479 PTPRUQ92729 1446 aa37.37■■■■□ 3.57
SMDT1-201ENST00000331479 CHD2O14647 1828 aaKnown RBP37.37■■■■□ 3.57
SMDT1-201ENST00000331479 PIK3R4Q99570 1358 aa37.36■■■■□ 3.57
SMDT1-201ENST00000331479 KCNA6P17658 529 aa37.35■■■■□ 3.57
SMDT1-201ENST00000331479 ASXL1Q8IXJ9 1541 aa37.33■■■■□ 3.57
SMDT1-201ENST00000331479 NWD1Q149M9 1564 aa37.32■■■■□ 3.57
SMDT1-201ENST00000331479 TMEM132EQ6IEE7 984 aa37.32■■■■□ 3.56
SMDT1-201ENST00000331479 LAMC1P11047 1609 aa37.32■■■■□ 3.56
SMDT1-201ENST00000331479 AMOTL2Q9Y2J4 779 aa37.29■■■■□ 3.56
SMDT1-201ENST00000331479 NBPF8Q3BBV2 869 aa37.27■■■■□ 3.56
SMDT1-201ENST00000331479 TIMELESSQ9UNS1 1208 aa37.26■■■■□ 3.56
SMDT1-201ENST00000331479 XRN1Q8IZH2 1706 aaKnown RBP37.25■■■■□ 3.55
SMDT1-201ENST00000331479 CPS1P31327 1500 aa37.25■■■■□ 3.55
SMDT1-201ENST00000331479 ADGRB1O14514 1584 aa37.24■■■■□ 3.55
SMDT1-201ENST00000331479 KIAA1210Q9ULL0 1709 aa37.22■■■■□ 3.55
SMDT1-201ENST00000331479 NKTRP30414 1462 aaKnown RBP37.21■■■■□ 3.55
SMDT1-201ENST00000331479 NBPF1Q3BBV0 1214 aa37.21■■■■□ 3.55
SMDT1-201ENST00000331479 LRRC7Q96NW7 1537 aa37.2■■■■□ 3.55
SMDT1-201ENST00000331479 STK26Q9P289 416 aa37.2■■■■□ 3.55
SMDT1-201ENST00000331479 YTHDC2Q9H6S0 1430 aaKnown RBP37.19■■■■□ 3.54
SMDT1-201ENST00000331479 TRPM1Q7Z4N2 1603 aa37.18■■■■□ 3.54
SMDT1-201ENST00000331479 RBM33Q96EV2 1170 aaKnown RBP37.18■■■■□ 3.54
SMDT1-201ENST00000331479 LRPPRCP42704 1394 aaKnown RBP37.18■■■■□ 3.54
SMDT1-201ENST00000331479 PROSER2Q86WR7 435 aaPredicted RBP37.17■■■■□ 3.54
SMDT1-201ENST00000331479 CERKQ8TCT0 537 aa37.13■■■■□ 3.53
SMDT1-201ENST00000331479 ABCC11Q96J66 1382 aa37.13■■■■□ 3.53
SMDT1-201ENST00000331479 ROBO2Q9HCK4 1378 aa37.13■■■■□ 3.53
SMDT1-201ENST00000331479 TMEM94Q12767 1356 aa37.11■■■■□ 3.53
SMDT1-201ENST00000331479 XIRP1Q702N8 1843 aaKnown RBP37.11■■■■□ 3.53
SMDT1-201ENST00000331479 TECPR2O15040 1411 aa37.11■■■■□ 3.53
SMDT1-201ENST00000331479 PTCH1Q13635 1447 aa37.1■■■■□ 3.53
SMDT1-201ENST00000331479 KNDC1Q76NI1 1749 aa37.1■■■■□ 3.53
SMDT1-201ENST00000331479 TRAK1Q9UPV9 953 aa37.07■■■■□ 3.52
SMDT1-201ENST00000331479 ROCK2O75116 1388 aaKnown RBP37.07■■■■□ 3.52
SMDT1-201ENST00000331479 RALGAPBQ86X10 1494 aa37.05■■■■□ 3.52
SMDT1-201ENST00000331479 WAPLQ7Z5K2 1190 aa37.04■■■■□ 3.52
SMDT1-201ENST00000331479 PLEKHH1Q9ULM0 1364 aa37.01■■■■□ 3.51
SMDT1-201ENST00000331479 DLC1Q96QB1 1528 aa37■■■■□ 3.51
SMDT1-201ENST00000331479 GPRASP1Q5JY77 1395 aa37■■■■□ 3.51
SMDT1-201ENST00000331479 SIRT1Q96EB6 747 aa36.99■■■■□ 3.51
SMDT1-201ENST00000331479 IQSEC2Q5JU85 1478 aa36.98■■■■□ 3.51
SMDT1-201ENST00000331479 FAM135BQ49AJ0 1406 aa36.98■■■■□ 3.51
SMDT1-201ENST00000331479 NCOA3Q9Y6Q9 1424 aa36.98■■■■□ 3.51
SMDT1-201ENST00000331479 PRAM1Q96QH2 718 aa36.97■■■■□ 3.51
SMDT1-201ENST00000331479 ARHGEF28Q8N1W1 1705 aaKnown RBP36.96■■■■□ 3.51
SMDT1-201ENST00000331479 C14orf37Q86TY3 774 aa36.95■■■■□ 3.51
SMDT1-201ENST00000331479 CARD11Q9BXL7 1154 aa36.94■■■■□ 3.5
SMDT1-201ENST00000331479 NALCNQ8IZF0 1738 aa36.92■■■■□ 3.5
SMDT1-201ENST00000331479 SAFB2Q14151 953 aaKnown RBP eCLIP36.92■■■■□ 3.5
SMDT1-201ENST00000331479 POGKQ9P215 609 aa36.91■■■■□ 3.5
SMDT1-201ENST00000331479 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.91■■■■□ 3.5
SMDT1-201ENST00000331479 ADGRL3Q9HAR2 1447 aa36.9■■■■□ 3.5
SMDT1-201ENST00000331479 MSH6P52701 1360 aa36.89■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms