RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CFAP65Q6ZU64 1925 aaKnown RBP20■□□□□ 0.79
CLCNKA-201ENST00000331433 HECW2Q9P2P5 1572 aa20■□□□□ 0.79
CLCNKA-201ENST00000331433 MAP3K4Q9Y6R4 1608 aa20■□□□□ 0.79
CLCNKA-201ENST00000331433 ABCA6Q8N139 1617 aa19.98■□□□□ 0.79
CLCNKA-201ENST00000331433 RAPGEF3O95398 923 aa19.98■□□□□ 0.79
CLCNKA-201ENST00000331433 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
CLCNKA-201ENST00000331433 KIAA1210Q9ULL0 1709 aa19.98■□□□□ 0.79
CLCNKA-201ENST00000331433 MYOM2P54296 1465 aa19.98■□□□□ 0.79
CLCNKA-201ENST00000331433 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
CLCNKA-201ENST00000331433 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
CLCNKA-201ENST00000331433 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
CLCNKA-201ENST00000331433 CHGAP10645 457 aaKnown RBP19.97■□□□□ 0.79
CLCNKA-201ENST00000331433 NPATQ14207 1427 aa19.96■□□□□ 0.79
CLCNKA-201ENST00000331433 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 CDCA8Q53HL2 280 aa19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 KNSTRNQ9Y448 316 aa19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 RBM19Q9Y4C8 960 aaKnown RBP19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 RIMBP3CA6NJZ7 1639 aa19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 RIMBP3BA6NNM3 1639 aa19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 RIMBP3Q9UFD9 1639 aa19.95■□□□□ 0.78
CLCNKA-201ENST00000331433 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
CLCNKA-201ENST00000331433 SYNMO15061 1565 aa19.93■□□□□ 0.78
CLCNKA-201ENST00000331433 NOS1P29475 1434 aa19.93■□□□□ 0.78
CLCNKA-201ENST00000331433 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
CLCNKA-201ENST00000331433 NEO1Q92859 1461 aa19.92■□□□□ 0.78
CLCNKA-201ENST00000331433 AMER1Q5JTC6 1135 aaPredicted RBP19.92■□□□□ 0.78
CLCNKA-201ENST00000331433 MYOM1P52179 1685 aa19.91■□□□□ 0.78
CLCNKA-201ENST00000331433 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
CLCNKA-201ENST00000331433 ABCC3O15438 1527 aa19.9■□□□□ 0.78
CLCNKA-201ENST00000331433 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
CLCNKA-201ENST00000331433 BLMP54132 1417 aaPredicted RBP19.88■□□□□ 0.77
CLCNKA-201ENST00000331433 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
CLCNKA-201ENST00000331433 ERVK-7P63135 1459 aa19.87■□□□□ 0.77
CLCNKA-201ENST00000331433 ASXL1Q8IXJ9 1541 aa19.86■□□□□ 0.77
CLCNKA-201ENST00000331433 DIP2CQ9Y2E4 1556 aa19.86■□□□□ 0.77
CLCNKA-201ENST00000331433 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
CLCNKA-201ENST00000331433 CAMSAP1Q5T5Y3 1602 aa19.85■□□□□ 0.77
CLCNKA-201ENST00000331433 PPLO60437 1756 aa19.85■□□□□ 0.77
CLCNKA-201ENST00000331433 ADAMTS8Q9UP79 889 aa19.84■□□□□ 0.77
CLCNKA-201ENST00000331433 SIGLEC1Q9BZZ2 1709 aa19.84■□□□□ 0.77
CLCNKA-201ENST00000331433 PIK3C2GO75747 1445 aa19.83■□□□□ 0.77
CLCNKA-201ENST00000331433 INSRP06213 1382 aa19.83■□□□□ 0.76
CLCNKA-201ENST00000331433 PDE3BQ13370 1112 aa19.83■□□□□ 0.76
CLCNKA-201ENST00000331433 RICTORQ6R327 1708 aa19.83■□□□□ 0.76
CLCNKA-201ENST00000331433 ZMYM4Q5VZL5 1548 aa19.83■□□□□ 0.76
CLCNKA-201ENST00000331433 TRAK1Q9UPV9 953 aa19.82■□□□□ 0.76
CLCNKA-201ENST00000331433 YEATS2Q9ULM3 1422 aa19.82■□□□□ 0.76
CLCNKA-201ENST00000331433 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
CLCNKA-201ENST00000331433 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
CLCNKA-201ENST00000331433 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
CLCNKA-201ENST00000331433 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
CLCNKA-201ENST00000331433 RCAN3Q9UKA8 241 aa19.81■□□□□ 0.76
CLCNKA-201ENST00000331433 SETBP1Q9Y6X0 1596 aa19.8■□□□□ 0.76
CLCNKA-201ENST00000331433 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
CLCNKA-201ENST00000331433 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
CLCNKA-201ENST00000331433 RRP1P56182 461 aaKnown RBP19.79■□□□□ 0.76
CLCNKA-201ENST00000331433 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
CLCNKA-201ENST00000331433 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
CLCNKA-201ENST00000331433 CCDC136Q96JN2 1154 aa19.78■□□□□ 0.76
CLCNKA-201ENST00000331433 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
CLCNKA-201ENST00000331433 ADGRB1O14514 1584 aa19.78■□□□□ 0.76
CLCNKA-201ENST00000331433 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
CLCNKA-201ENST00000331433 RPGRIP1LQ68CZ1 1315 aa19.77■□□□□ 0.76
CLCNKA-201ENST00000331433 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
CLCNKA-201ENST00000331433 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
CLCNKA-201ENST00000331433 IDI1Q13907 227 aa19.73■□□□□ 0.75
CLCNKA-201ENST00000331433 ARHGAP31Q2M1Z3 1444 aa19.72■□□□□ 0.75
CLCNKA-201ENST00000331433 NEXMIFQ5QGS0 1516 aa19.72■□□□□ 0.75
CLCNKA-201ENST00000331433 ZC3H13Q5T200 1668 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-201ENST00000331433 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
CLCNKA-201ENST00000331433 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
CLCNKA-201ENST00000331433 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
CLCNKA-201ENST00000331433 GLI2P10070 1586 aa19.71■□□□□ 0.75
CLCNKA-201ENST00000331433 EXOC6Q8TAG9 804 aa19.71■□□□□ 0.75
CLCNKA-201ENST00000331433 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
CLCNKA-201ENST00000331433 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
CLCNKA-201ENST00000331433 CCDC146Q8IYE0 955 aa19.68■□□□□ 0.74
CLCNKA-201ENST00000331433 PLIN1O60240 522 aa19.67■□□□□ 0.74
CLCNKA-201ENST00000331433 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
CLCNKA-201ENST00000331433 TSPOAP1O95153 1857 aa19.66■□□□□ 0.74
CLCNKA-201ENST00000331433 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
CLCNKA-201ENST00000331433 MYO5BQ9ULV0 1848 aa19.66■□□□□ 0.74
CLCNKA-201ENST00000331433 DIP2BQ9P265 1576 aa19.65■□□□□ 0.74
CLCNKA-201ENST00000331433 PREX1Q8TCU6 1659 aa19.65■□□□□ 0.74
CLCNKA-201ENST00000331433 ZNF521Q96K83 1311 aa19.65■□□□□ 0.74
CLCNKA-201ENST00000331433 ARHGEF28Q8N1W1 1705 aaKnown RBP19.64■□□□□ 0.74
CLCNKA-201ENST00000331433 SAFB2Q14151 953 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLCNKA-201ENST00000331433 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
CLCNKA-201ENST00000331433 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
CLCNKA-201ENST00000331433 FANCIQ9NVI1 1328 aa19.63■□□□□ 0.73
CLCNKA-201ENST00000331433 DUSP27Q5VZP5 1158 aa19.62■□□□□ 0.73
CLCNKA-201ENST00000331433 APAF1O14727 1248 aa19.62■□□□□ 0.73
CLCNKA-201ENST00000331433 MSH5O43196 834 aa19.61■□□□□ 0.73
CLCNKA-201ENST00000331433 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
CLCNKA-201ENST00000331433 STK26Q9P289 416 aa19.61■□□□□ 0.73
CLCNKA-201ENST00000331433 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
CLCNKA-201ENST00000331433 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
CLCNKA-201ENST00000331433 TMEM131LA2VDJ0 1609 aa19.6■□□□□ 0.73
CLCNKA-201ENST00000331433 EVC2Q86UK5 1308 aa19.6■□□□□ 0.73
CLCNKA-201ENST00000331433 ANP32EQ9BTT0 268 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms