RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 ABCC3O15438 1527 aa11.96□□□□□ -0.49
CPNE8-201ENST00000331366 MLH3Q9UHC1 1453 aa11.95□□□□□ -0.5
CPNE8-201ENST00000331366 RICTORQ6R327 1708 aa11.95□□□□□ -0.5
CPNE8-201ENST00000331366 HNRNPUQ00839 825 aaKnown RBP eCLIP11.95□□□□□ -0.5
CPNE8-201ENST00000331366 NGEFQ8N5V2 710 aa11.95□□□□□ -0.5
CPNE8-201ENST00000331366 GLI2P10070 1586 aa11.95□□□□□ -0.5
CPNE8-201ENST00000331366 SETD1AO15047 1707 aaKnown RBP11.95□□□□□ -0.5
CPNE8-201ENST00000331366 MS4A1P11836 297 aa11.94□□□□□ -0.5
CPNE8-201ENST00000331366 SIGLEC1Q9BZZ2 1709 aa11.93□□□□□ -0.5
CPNE8-201ENST00000331366 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
CPNE8-201ENST00000331366 MED14O60244 1454 aa11.93□□□□□ -0.5
CPNE8-201ENST00000331366 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
CPNE8-201ENST00000331366 PUS7Q96PZ0 661 aaKnown RBP11.93□□□□□ -0.5
CPNE8-201ENST00000331366 ZFYVE9O95405 1425 aa11.93□□□□□ -0.5
CPNE8-201ENST00000331366 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
CPNE8-201ENST00000331366 KANK1Q14678 1352 aa11.92□□□□□ -0.5
CPNE8-201ENST00000331366 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
CPNE8-201ENST00000331366 CHIC2Q9UKJ5 165 aa11.92□□□□□ -0.5
CPNE8-201ENST00000331366 ARHGAP31Q2M1Z3 1444 aa11.92□□□□□ -0.5
CPNE8-201ENST00000331366 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
CPNE8-201ENST00000331366 NLRP13Q86W25 1043 aa11.91□□□□□ -0.5
CPNE8-201ENST00000331366 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
CPNE8-201ENST00000331366 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
CPNE8-201ENST00000331366 ERVK-7P63135 1459 aa11.91□□□□□ -0.5
CPNE8-201ENST00000331366 MRS2Q9HD23 443 aa11.9□□□□□ -0.5
CPNE8-201ENST00000331366 ATP1B4Q9UN42 357 aaPredicted RBP11.89□□□□□ -0.51
CPNE8-201ENST00000331366 DISP3Q9P2K9 1392 aa11.89□□□□□ -0.51
CPNE8-201ENST00000331366 TRAPPC8Q9Y2L5 1435 aa11.88□□□□□ -0.51
CPNE8-201ENST00000331366 NEXMIFQ5QGS0 1516 aa11.88□□□□□ -0.51
CPNE8-201ENST00000331366 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
CPNE8-201ENST00000331366 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
CPNE8-201ENST00000331366 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
CPNE8-201ENST00000331366 NOS1P29475 1434 aa11.85□□□□□ -0.51
CPNE8-201ENST00000331366 NEO1Q92859 1461 aa11.85□□□□□ -0.51
CPNE8-201ENST00000331366 HIRIP3Q9BW71 556 aaPredicted RBP11.85□□□□□ -0.51
CPNE8-201ENST00000331366 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
CPNE8-201ENST00000331366 FOXD1Q16676 465 aa11.84□□□□□ -0.51
CPNE8-201ENST00000331366 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
CPNE8-201ENST00000331366 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
CPNE8-201ENST00000331366 DLC1Q96QB1 1528 aa11.83□□□□□ -0.51
CPNE8-201ENST00000331366 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
CPNE8-201ENST00000331366 RRP1P56182 461 aaKnown RBP11.83□□□□□ -0.52
CPNE8-201ENST00000331366 RIMS1Q86UR5 1692 aaKnown RBP11.83□□□□□ -0.52
CPNE8-201ENST00000331366 POLR3AO14802 1390 aaPredicted RBP11.83□□□□□ -0.52
CPNE8-201ENST00000331366 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
CPNE8-201ENST00000331366 ARHGEF40Q8TER5 1519 aa11.83□□□□□ -0.52
CPNE8-201ENST00000331366 TMEM131LA2VDJ0 1609 aa11.82□□□□□ -0.52
CPNE8-201ENST00000331366 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
CPNE8-201ENST00000331366 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
CPNE8-201ENST00000331366 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
CPNE8-201ENST00000331366 AAMPQ13685 434 aa11.81□□□□□ -0.52
CPNE8-201ENST00000331366 NSD2O96028 1365 aa11.8□□□□□ -0.52
CPNE8-201ENST00000331366 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
CPNE8-201ENST00000331366 PHF23Q9BUL5 403 aaPredicted RBP11.79□□□□□ -0.52
CPNE8-201ENST00000331366 AGLP35573 1532 aa11.79□□□□□ -0.52
CPNE8-201ENST00000331366 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
CPNE8-201ENST00000331366 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
CPNE8-201ENST00000331366 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
CPNE8-201ENST00000331366 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
CPNE8-201ENST00000331366 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CPNE8-201ENST00000331366 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
CPNE8-201ENST00000331366 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
CPNE8-201ENST00000331366 NRKQ7Z2Y5 1582 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 AKAP12Q02952 1782 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
CPNE8-201ENST00000331366 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 MON2Q7Z3U7 1717 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 ASXL2Q76L83 1435 aa11.76□□□□□ -0.53
CPNE8-201ENST00000331366 RPGRIP1LQ68CZ1 1315 aa11.75□□□□□ -0.53
CPNE8-201ENST00000331366 IPO9Q96P70 1041 aaKnown RBP11.75□□□□□ -0.53
CPNE8-201ENST00000331366 EFCAB2Q5VUJ9 269 aa11.74□□□□□ -0.53
CPNE8-201ENST00000331366 HNRNPMP52272 730 aaKnown RBP eCLIP11.74□□□□□ -0.53
CPNE8-201ENST00000331366 TMF1P82094 1093 aa11.74□□□□□ -0.53
CPNE8-201ENST00000331366 TOPAZ1Q8N9V7 1692 aa11.74□□□□□ -0.53
CPNE8-201ENST00000331366 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
CPNE8-201ENST00000331366 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
CPNE8-201ENST00000331366 YEATS2Q9ULM3 1422 aa11.72□□□□□ -0.53
CPNE8-201ENST00000331366 BACH2Q9BYV9 841 aa11.72□□□□□ -0.53
CPNE8-201ENST00000331366 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
CPNE8-201ENST00000331366 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
CPNE8-201ENST00000331366 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
CPNE8-201ENST00000331366 CCDC27Q2M243 656 aa11.71□□□□□ -0.54
CPNE8-201ENST00000331366 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.54
CPNE8-201ENST00000331366 PPIP5K1Q6PFW1 1433 aa11.7□□□□□ -0.54
CPNE8-201ENST00000331366 DCAF11Q8TEB1 546 aa11.7□□□□□ -0.54
CPNE8-201ENST00000331366 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
CPNE8-201ENST00000331366 NPATQ14207 1427 aa11.69□□□□□ -0.54
CPNE8-201ENST00000331366 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
CPNE8-201ENST00000331366 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
CPNE8-201ENST00000331366 TMC1Q8TDI8 760 aa11.69□□□□□ -0.54
CPNE8-201ENST00000331366 BCANQ96GW7 911 aa11.68□□□□□ -0.54
CPNE8-201ENST00000331366 PTPRMP28827 1452 aa11.68□□□□□ -0.54
CPNE8-201ENST00000331366 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
CPNE8-201ENST00000331366 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
CPNE8-201ENST00000331366 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
CPNE8-201ENST00000331366 C3P01024 1663 aa11.66□□□□□ -0.54
CPNE8-201ENST00000331366 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
CPNE8-201ENST00000331366 SLFN5Q08AF3 891 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms