RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 RUNDC1Q96C34 613 aa23.25■■□□□ 1.31
NPLOC4-201ENST00000331134 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
NPLOC4-201ENST00000331134 MINK1Q8N4C8 1332 aaPredicted RBP23.25■■□□□ 1.31
NPLOC4-201ENST00000331134 CAVIN1Q6NZI2 390 aaKnown RBP23.24■■□□□ 1.31
NPLOC4-201ENST00000331134 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
NPLOC4-201ENST00000331134 RSPH4AQ5TD94 716 aa23.23■■□□□ 1.31
NPLOC4-201ENST00000331134 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-201ENST00000331134 WASHC2CQ9Y4E1 1318 aa23.22■■□□□ 1.31
NPLOC4-201ENST00000331134 SMG6Q86US8 1419 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-201ENST00000331134 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.22■■□□□ 1.31
NPLOC4-201ENST00000331134 REC8O95072 547 aa23.21■■□□□ 1.31
NPLOC4-201ENST00000331134 MTHFSP49914 203 aa23.2■■□□□ 1.31
NPLOC4-201ENST00000331134 GGNBP2Q9H3C7 697 aa23.2■■□□□ 1.31
NPLOC4-201ENST00000331134 HMOX1P09601 288 aa23.2■■□□□ 1.3
NPLOC4-201ENST00000331134 LMOD3Q0VAK6 560 aa23.19■■□□□ 1.3
NPLOC4-201ENST00000331134 CSPP1Q1MSJ5 1256 aa23.18■■□□□ 1.3
NPLOC4-201ENST00000331134 CREBRFQ8IUR6 639 aa23.18■■□□□ 1.3
NPLOC4-201ENST00000331134 C1orf115Q9H7X2 142 aa23.18■■□□□ 1.3
NPLOC4-201ENST00000331134 ZNF771Q7L3S4 317 aaPredicted RBP23.18■■□□□ 1.3
NPLOC4-201ENST00000331134 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
NPLOC4-201ENST00000331134 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
NPLOC4-201ENST00000331134 NUCB2P80303 420 aa23.17■■□□□ 1.3
NPLOC4-201ENST00000331134 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
NPLOC4-201ENST00000331134 CFTRP13569 1480 aa23.17■■□□□ 1.3
NPLOC4-201ENST00000331134 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
NPLOC4-201ENST00000331134 PKNOX2Q96KN3 472 aa23.16■■□□□ 1.3
NPLOC4-201ENST00000331134 BECN2A8MW95 431 aa23.16■■□□□ 1.3
NPLOC4-201ENST00000331134 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
NPLOC4-201ENST00000331134 VPS37CA5D8V6 355 aaPredicted RBP23.15■■□□□ 1.3
NPLOC4-201ENST00000331134 CCAR2Q8N163 923 aaKnown RBP23.15■■□□□ 1.3
NPLOC4-201ENST00000331134 AMPHP49418 695 aa23.15■■□□□ 1.3
NPLOC4-201ENST00000331134 TMEM132EQ6IEE7 984 aa23.15■■□□□ 1.3
NPLOC4-201ENST00000331134 EXOSC9Q06265 439 aaKnown RBP23.15■■□□□ 1.3
NPLOC4-201ENST00000331134 GOLGA6L19H0YKK7 550 aa23.14■■□□□ 1.3
NPLOC4-201ENST00000331134 PRPF40AO75400 957 aaKnown RBP23.14■■□□□ 1.3
NPLOC4-201ENST00000331134 GPATCH3Q96I76 525 aa23.13■■□□□ 1.29
NPLOC4-201ENST00000331134 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
NPLOC4-201ENST00000331134 MCM4P33991 863 aa23.13■■□□□ 1.29
NPLOC4-201ENST00000331134 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
NPLOC4-201ENST00000331134 ANKRD50Q9ULJ7 1429 aa23.13■■□□□ 1.29
NPLOC4-201ENST00000331134 FBXW7Q969H0 707 aa23.12■■□□□ 1.29
NPLOC4-201ENST00000331134 GORABQ5T7V8 394 aa23.12■■□□□ 1.29
NPLOC4-201ENST00000331134 H3BQV1 296 aa23.12■■□□□ 1.29
NPLOC4-201ENST00000331134 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
NPLOC4-201ENST00000331134 EVC2Q86UK5 1308 aa23.12■■□□□ 1.29
NPLOC4-201ENST00000331134 ATP6V1DQ9Y5K8 247 aa23.11■■□□□ 1.29
NPLOC4-201ENST00000331134 CFAP70Q5T0N1 1121 aa23.11■■□□□ 1.29
NPLOC4-201ENST00000331134 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
NPLOC4-201ENST00000331134 GRPEL1Q9HAV7 217 aa23.1■■□□□ 1.29
NPLOC4-201ENST00000331134 ESPNB1AK53 854 aa23.1■■□□□ 1.29
NPLOC4-201ENST00000331134 PDE3AQ14432 1141 aa23.1■■□□□ 1.29
NPLOC4-201ENST00000331134 EIF2S2P20042 333 aaKnown RBP23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 INTS3Q68E01 1043 aaKnown RBP23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 NGDNQ8NEJ9 315 aaKnown RBP23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 TPM4P67936 248 aa23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 A0A0U1RQG5 324 aaPredicted RBP23.09■■□□□ 1.29
NPLOC4-201ENST00000331134 FAM184AQ8NB25 1140 aa23.08■■□□□ 1.29
NPLOC4-201ENST00000331134 SYNJ1O43426 1573 aa23.07■■□□□ 1.28
NPLOC4-201ENST00000331134 NEK4P51957 841 aa23.07■■□□□ 1.28
NPLOC4-201ENST00000331134 HDGFP51858 240 aaKnown RBP23.07■■□□□ 1.28
NPLOC4-201ENST00000331134 BICD2Q8TD16 824 aa23.07■■□□□ 1.28
NPLOC4-201ENST00000331134 CDC45O75419 566 aa23.06■■□□□ 1.28
NPLOC4-201ENST00000331134 NPHP1O15259 732 aa23.06■■□□□ 1.28
NPLOC4-201ENST00000331134 FKBP5Q13451 457 aaPredicted RBP23.06■■□□□ 1.28
NPLOC4-201ENST00000331134 CABP2Q9NPB3 220 aa23.06■■□□□ 1.28
NPLOC4-201ENST00000331134 IFT57Q9NWB7 429 aa23.05■■□□□ 1.28
NPLOC4-201ENST00000331134 FOSBP53539 338 aa23.05■■□□□ 1.28
NPLOC4-201ENST00000331134 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
NPLOC4-201ENST00000331134 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
NPLOC4-201ENST00000331134 COG3Q96JB2 828 aa23.04■■□□□ 1.28
NPLOC4-201ENST00000331134 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
NPLOC4-201ENST00000331134 ISY1Q9ULR0 285 aaKnown RBP23.04■■□□□ 1.28
NPLOC4-201ENST00000331134 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
NPLOC4-201ENST00000331134 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
NPLOC4-201ENST00000331134 SMC3Q9UQE7 1217 aa23.03■■□□□ 1.28
NPLOC4-201ENST00000331134 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
NPLOC4-201ENST00000331134 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
NPLOC4-201ENST00000331134 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
NPLOC4-201ENST00000331134 CSB-PGBD3P0DP91 1061 aa23.02■■□□□ 1.28
NPLOC4-201ENST00000331134 NOB1Q9ULX3 412 aaKnown RBP23.01■■□□□ 1.27
NPLOC4-201ENST00000331134 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
NPLOC4-201ENST00000331134 ZKSCAN1P17029 563 aaPredicted RBP23■■□□□ 1.27
NPLOC4-201ENST00000331134 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
NPLOC4-201ENST00000331134 HOMER1Q86YM7 354 aa22.98■■□□□ 1.27
NPLOC4-201ENST00000331134 PES1O00541 588 aaKnown RBP22.97■■□□□ 1.27
NPLOC4-201ENST00000331134 FIBPO43427 364 aa22.97■■□□□ 1.27
NPLOC4-201ENST00000331134 TPM2P07951 284 aa22.96■■□□□ 1.27
NPLOC4-201ENST00000331134 GNAI1P63096 354 aa22.96■■□□□ 1.27
NPLOC4-201ENST00000331134 TAF7LQ5H9L4 462 aa22.96■■□□□ 1.27
NPLOC4-201ENST00000331134 CCDC39Q9UFE4 941 aa22.96■■□□□ 1.27
NPLOC4-201ENST00000331134 CCDC173Q0VFZ6 552 aa22.96■■□□□ 1.27
NPLOC4-201ENST00000331134 AAMPQ13685 434 aa22.96■■□□□ 1.27
NPLOC4-201ENST00000331134 GOLGA6L1Q8N7Z2 621 aa22.95■■□□□ 1.26
NPLOC4-201ENST00000331134 C9orf78Q9NZ63 289 aaPredicted RBP22.95■■□□□ 1.26
NPLOC4-201ENST00000331134 SPC24Q8NBT2 197 aa22.95■■□□□ 1.26
NPLOC4-201ENST00000331134 KIF3AQ9Y496 699 aa22.95■■□□□ 1.26
NPLOC4-201ENST00000331134 NAIPQ13075 1403 aa22.95■■□□□ 1.26
NPLOC4-201ENST00000331134 PRKAR2BP31323 418 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms