RNA–Protein interactions for RNA: ENST00000329255.3

ALX4-201, Transcript of ALX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX4, Length 5,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4-201ENST00000329255 ARGLU1Q9NWB6 273 aaPredicted RBP16.6■□□□□ 0.25
ALX4-201ENST00000329255 CPLX1O14810 134 aa16.59■□□□□ 0.25
ALX4-201ENST00000329255 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
ALX4-201ENST00000329255 CDR1P51861 262 aa16.59■□□□□ 0.25
ALX4-201ENST00000329255 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
ALX4-201ENST00000329255 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
ALX4-201ENST00000329255 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
ALX4-201ENST00000329255 NUCB2P80303 420 aa16.58■□□□□ 0.25
ALX4-201ENST00000329255 NEXNQ0ZGT2 675 aa16.58■□□□□ 0.25
ALX4-201ENST00000329255 C1orf141Q5JVX7 400 aa16.58■□□□□ 0.25
ALX4-201ENST00000329255 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
ALX4-201ENST00000329255 SASS6Q6UVJ0 657 aa16.58■□□□□ 0.24
ALX4-201ENST00000329255 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
ALX4-201ENST00000329255 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
ALX4-201ENST00000329255 AK7Q96M32 723 aa16.57■□□□□ 0.24
ALX4-201ENST00000329255 RUFY1Q96T51 708 aa16.57■□□□□ 0.24
ALX4-201ENST00000329255 ANO8Q9HCE9 1232 aaPredicted RBP16.57■□□□□ 0.24
ALX4-201ENST00000329255 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
ALX4-201ENST00000329255 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
ALX4-201ENST00000329255 TCEAL9Q9UHQ7 104 aa16.57■□□□□ 0.24
ALX4-201ENST00000329255 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
ALX4-201ENST00000329255 COG3Q96JB2 828 aa16.57■□□□□ 0.24
ALX4-201ENST00000329255 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
ALX4-201ENST00000329255 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
ALX4-201ENST00000329255 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
ALX4-201ENST00000329255 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
ALX4-201ENST00000329255 MNS1Q8NEH6 495 aa16.56■□□□□ 0.24
ALX4-201ENST00000329255 API5Q9BZZ5 524 aaKnown RBP16.56■□□□□ 0.24
ALX4-201ENST00000329255 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
ALX4-201ENST00000329255 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
ALX4-201ENST00000329255 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
ALX4-201ENST00000329255 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
ALX4-201ENST00000329255 WWC1Q8IX03 1113 aa16.55■□□□□ 0.24
ALX4-201ENST00000329255 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
ALX4-201ENST00000329255 TEFQ10587 303 aa16.55■□□□□ 0.24
ALX4-201ENST00000329255 TRDNQ13061 729 aa16.54■□□□□ 0.24
ALX4-201ENST00000329255 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
ALX4-201ENST00000329255 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
ALX4-201ENST00000329255 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
ALX4-201ENST00000329255 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
ALX4-201ENST00000329255 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
ALX4-201ENST00000329255 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
ALX4-201ENST00000329255 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
ALX4-201ENST00000329255 HSP90B2PQ58FF3 399 aa16.53■□□□□ 0.24
ALX4-201ENST00000329255 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
ALX4-201ENST00000329255 APPP05067 770 aa16.52■□□□□ 0.23
ALX4-201ENST00000329255 APAF1O14727 1248 aa16.51■□□□□ 0.23
ALX4-201ENST00000329255 MTERF4Q7Z6M4 381 aaKnown RBP16.51■□□□□ 0.23
ALX4-201ENST00000329255 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
ALX4-201ENST00000329255 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
ALX4-201ENST00000329255 CCDC39Q9UFE4 941 aa16.51■□□□□ 0.23
ALX4-201ENST00000329255 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
ALX4-201ENST00000329255 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
ALX4-201ENST00000329255 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
ALX4-201ENST00000329255 ERICH2A1L162 156 aa16.49■□□□□ 0.23
ALX4-201ENST00000329255 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
ALX4-201ENST00000329255 MAP7D2Q96T17 732 aa16.49■□□□□ 0.23
ALX4-201ENST00000329255 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
ALX4-201ENST00000329255 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
ALX4-201ENST00000329255 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
ALX4-201ENST00000329255 MRE11P49959 708 aa16.49■□□□□ 0.23
ALX4-201ENST00000329255 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
ALX4-201ENST00000329255 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
ALX4-201ENST00000329255 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
ALX4-201ENST00000329255 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
ALX4-201ENST00000329255 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
ALX4-201ENST00000329255 USP47Q96K76 1375 aa16.48■□□□□ 0.23
ALX4-201ENST00000329255 RAD21O60216 631 aa16.48■□□□□ 0.23
ALX4-201ENST00000329255 AAMPQ13685 434 aa16.48■□□□□ 0.23
ALX4-201ENST00000329255 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
ALX4-201ENST00000329255 ERC2O15083 957 aa16.47■□□□□ 0.23
ALX4-201ENST00000329255 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
ALX4-201ENST00000329255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
ALX4-201ENST00000329255 DHX57Q6P158 1386 aaKnown RBP16.46■□□□□ 0.23
ALX4-201ENST00000329255 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
ALX4-201ENST00000329255 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
ALX4-201ENST00000329255 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
ALX4-201ENST00000329255 CWC15Q9P013 229 aaKnown RBP16.45■□□□□ 0.22
ALX4-201ENST00000329255 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
ALX4-201ENST00000329255 RIPK4P57078 832 aa16.45■□□□□ 0.22
ALX4-201ENST00000329255 ERCC4Q92889 916 aaPredicted RBP16.45■□□□□ 0.22
ALX4-201ENST00000329255 VGFO15240 615 aaPredicted RBP16.45■□□□□ 0.22
ALX4-201ENST00000329255 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
ALX4-201ENST00000329255 CT47A1Q5JQC4 288 aaPredicted RBP16.45■□□□□ 0.22
ALX4-201ENST00000329255 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
ALX4-201ENST00000329255 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
ALX4-201ENST00000329255 NFKBIBQ15653 356 aa16.44■□□□□ 0.22
ALX4-201ENST00000329255 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
ALX4-201ENST00000329255 CCDC173Q0VFZ6 552 aa16.44■□□□□ 0.22
ALX4-201ENST00000329255 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
ALX4-201ENST00000329255 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
ALX4-201ENST00000329255 CDC45O75419 566 aa16.43■□□□□ 0.22
ALX4-201ENST00000329255 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
ALX4-201ENST00000329255 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
ALX4-201ENST00000329255 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
ALX4-201ENST00000329255 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
ALX4-201ENST00000329255 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
ALX4-201ENST00000329255 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
ALX4-201ENST00000329255 RALYLQ86SE5 291 aaKnown RBP16.42■□□□□ 0.22
ALX4-201ENST00000329255 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms