RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
CCDC60-201ENST00000327554 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
CCDC60-201ENST00000327554 TMF1P82094 1093 aa16.4■□□□□ 0.22
CCDC60-201ENST00000327554 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
CCDC60-201ENST00000327554 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
CCDC60-201ENST00000327554 HSP90AA2PQ14568 343 aaPredicted RBP16.39■□□□□ 0.21
CCDC60-201ENST00000327554 ARXQ96QS3 562 aa16.39■□□□□ 0.21
CCDC60-201ENST00000327554 TBC1D32Q96NH3 1257 aa16.39■□□□□ 0.21
CCDC60-201ENST00000327554 RNF17Q9BXT8 1623 aaKnown RBP16.39■□□□□ 0.21
CCDC60-201ENST00000327554 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
CCDC60-201ENST00000327554 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
CCDC60-201ENST00000327554 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
CCDC60-201ENST00000327554 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
CCDC60-201ENST00000327554 MCM4P33991 863 aa16.37■□□□□ 0.21
CCDC60-201ENST00000327554 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
CCDC60-201ENST00000327554 PIK3C2GO75747 1445 aa16.37■□□□□ 0.21
CCDC60-201ENST00000327554 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
CCDC60-201ENST00000327554 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
CCDC60-201ENST00000327554 PLXNC1O60486 1568 aa16.36■□□□□ 0.21
CCDC60-201ENST00000327554 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
CCDC60-201ENST00000327554 PDE3AQ14432 1141 aa16.36■□□□□ 0.21
CCDC60-201ENST00000327554 PLB1Q6P1J6 1458 aa16.36■□□□□ 0.21
CCDC60-201ENST00000327554 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
CCDC60-201ENST00000327554 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
CCDC60-201ENST00000327554 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
CCDC60-201ENST00000327554 ZMYM3Q14202 1370 aa16.34■□□□□ 0.21
CCDC60-201ENST00000327554 NINLQ9Y2I6 1382 aa16.34■□□□□ 0.21
CCDC60-201ENST00000327554 GZF1Q9H116 711 aaPredicted RBP16.34■□□□□ 0.21
CCDC60-201ENST00000327554 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
CCDC60-201ENST00000327554 NUP160Q12769 1436 aa16.34■□□□□ 0.21
CCDC60-201ENST00000327554 SYNMO15061 1565 aa16.33■□□□□ 0.2
CCDC60-201ENST00000327554 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
CCDC60-201ENST00000327554 E9PSI1 815 aa16.33■□□□□ 0.2
CCDC60-201ENST00000327554 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
CCDC60-201ENST00000327554 ASXL1Q8IXJ9 1541 aa16.32■□□□□ 0.2
CCDC60-201ENST00000327554 APAF1O14727 1248 aa16.32■□□□□ 0.2
CCDC60-201ENST00000327554 MRE11P49959 708 aa16.32■□□□□ 0.2
CCDC60-201ENST00000327554 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
CCDC60-201ENST00000327554 UPF2Q9HAU5 1272 aaKnown RBP16.32■□□□□ 0.2
CCDC60-201ENST00000327554 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
CCDC60-201ENST00000327554 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
CCDC60-201ENST00000327554 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
CCDC60-201ENST00000327554 IQGAP1P46940 1657 aa16.31■□□□□ 0.2
CCDC60-201ENST00000327554 MYOM1P52179 1685 aa16.31■□□□□ 0.2
CCDC60-201ENST00000327554 UNC13BO14795 1591 aa16.31■□□□□ 0.2
CCDC60-201ENST00000327554 TRAK2O60296 914 aa16.3■□□□□ 0.2
CCDC60-201ENST00000327554 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
CCDC60-201ENST00000327554 RTEL1-TNFRSF6BF6WH68 1400 aa16.3■□□□□ 0.2
CCDC60-201ENST00000327554 SPRYD3Q8NCJ5 442 aa16.28■□□□□ 0.2
CCDC60-201ENST00000327554 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
CCDC60-201ENST00000327554 ESPNB1AK53 854 aa16.28■□□□□ 0.2
CCDC60-201ENST00000327554 CHMP5Q9NZZ3 219 aa16.28■□□□□ 0.2
CCDC60-201ENST00000327554 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.2
CCDC60-201ENST00000327554 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.19
CCDC60-201ENST00000327554 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
CCDC60-201ENST00000327554 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
CCDC60-201ENST00000327554 PCDHB15Q9Y5E8 787 aa16.26■□□□□ 0.19
CCDC60-201ENST00000327554 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC60-201ENST00000327554 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
CCDC60-201ENST00000327554 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
CCDC60-201ENST00000327554 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
CCDC60-201ENST00000327554 ABCA8O94911 1581 aa16.25■□□□□ 0.19
CCDC60-201ENST00000327554 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
CCDC60-201ENST00000327554 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
CCDC60-201ENST00000327554 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
CCDC60-201ENST00000327554 AAMPQ13685 434 aa16.23■□□□□ 0.19
CCDC60-201ENST00000327554 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
CCDC60-201ENST00000327554 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
CCDC60-201ENST00000327554 SAMD9LQ8IVG5 1584 aa16.23■□□□□ 0.19
CCDC60-201ENST00000327554 MADDQ8WXG6 1647 aa16.23■□□□□ 0.19
CCDC60-201ENST00000327554 ATP10AO60312 1499 aa16.22■□□□□ 0.19
CCDC60-201ENST00000327554 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
CCDC60-201ENST00000327554 RLBP1P12271 317 aa16.21■□□□□ 0.18
CCDC60-201ENST00000327554 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.18
CCDC60-201ENST00000327554 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.18
CCDC60-201ENST00000327554 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
CCDC60-201ENST00000327554 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
CCDC60-201ENST00000327554 PLEKHD1A6NEE1 506 aa16.2■□□□□ 0.18
CCDC60-201ENST00000327554 TPM2P07951 284 aa16.2■□□□□ 0.18
CCDC60-201ENST00000327554 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
CCDC60-201ENST00000327554 DDIT3P35638 169 aa16.19■□□□□ 0.18
CCDC60-201ENST00000327554 RARSP54136 660 aaKnown RBP16.19■□□□□ 0.18
CCDC60-201ENST00000327554 CEP152O94986 1710 aa16.19■□□□□ 0.18
CCDC60-201ENST00000327554 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
CCDC60-201ENST00000327554 ATP10BO94823 1461 aa16.18■□□□□ 0.18
CCDC60-201ENST00000327554 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
CCDC60-201ENST00000327554 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
CCDC60-201ENST00000327554 GAS2L3Q86XJ1 694 aa16.18■□□□□ 0.18
CCDC60-201ENST00000327554 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
CCDC60-201ENST00000327554 PREX2Q70Z35 1606 aa16.17■□□□□ 0.18
CCDC60-201ENST00000327554 SHPRHQ149N8 1683 aa16.17■□□□□ 0.18
CCDC60-201ENST00000327554 RWDD1Q9H446 243 aaPredicted RBP16.17■□□□□ 0.18
CCDC60-201ENST00000327554 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
CCDC60-201ENST00000327554 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
CCDC60-201ENST00000327554 SCAPERQ9BY12 1400 aa16.16■□□□□ 0.18
CCDC60-201ENST00000327554 MFAP1P55081 439 aaKnown RBP16.16■□□□□ 0.18
CCDC60-201ENST00000327554 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
CCDC60-201ENST00000327554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCDC60-201ENST00000327554 PDCL3Q9H2J4 239 aa16.16■□□□□ 0.18
CCDC60-201ENST00000327554 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms