RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
LIN28A-202ENST00000326279 PSME1Q06323 249 aa17.21■□□□□ 0.35
LIN28A-202ENST00000326279 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.35
LIN28A-202ENST00000326279 AMPHP49418 695 aa17.21■□□□□ 0.35
LIN28A-202ENST00000326279 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
LIN28A-202ENST00000326279 FBLN1P23142 703 aa17.19■□□□□ 0.34
LIN28A-202ENST00000326279 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
LIN28A-202ENST00000326279 RPRD2Q5VT52 1461 aaKnown RBP17.17■□□□□ 0.34
LIN28A-202ENST00000326279 TEX14Q8IWB6 1497 aa17.17■□□□□ 0.34
LIN28A-202ENST00000326279 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
LIN28A-202ENST00000326279 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
LIN28A-202ENST00000326279 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
LIN28A-202ENST00000326279 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
LIN28A-202ENST00000326279 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
LIN28A-202ENST00000326279 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
LIN28A-202ENST00000326279 KDM6BO15054 1643 aa17.16■□□□□ 0.34
LIN28A-202ENST00000326279 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
LIN28A-202ENST00000326279 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 COG3Q96JB2 828 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
LIN28A-202ENST00000326279 PZPP20742 1482 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 HMOX1P09601 288 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 ATF3P18847 181 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 NLRP6P59044 892 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
LIN28A-202ENST00000326279 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.33
LIN28A-202ENST00000326279 DUOX2Q9NRD8 1548 aa17.14■□□□□ 0.33
LIN28A-202ENST00000326279 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
LIN28A-202ENST00000326279 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
LIN28A-202ENST00000326279 MTHFSP49914 203 aa17.13■□□□□ 0.33
LIN28A-202ENST00000326279 APAF1O14727 1248 aa17.12■□□□□ 0.33
LIN28A-202ENST00000326279 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
LIN28A-202ENST00000326279 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
LIN28A-202ENST00000326279 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
LIN28A-202ENST00000326279 ANP32AP39687 249 aaKnown RBP17.11■□□□□ 0.33
LIN28A-202ENST00000326279 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
LIN28A-202ENST00000326279 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
LIN28A-202ENST00000326279 TNRQ92752 1358 aa17.11■□□□□ 0.33
LIN28A-202ENST00000326279 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
LIN28A-202ENST00000326279 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
LIN28A-202ENST00000326279 FOXO3O43524 673 aa17.1■□□□□ 0.33
LIN28A-202ENST00000326279 PLIN1O60240 522 aa17.1■□□□□ 0.33
LIN28A-202ENST00000326279 ATP7AQ04656 1500 aa17.1■□□□□ 0.33
LIN28A-202ENST00000326279 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
LIN28A-202ENST00000326279 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
LIN28A-202ENST00000326279 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
LIN28A-202ENST00000326279 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
LIN28A-202ENST00000326279 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.32
LIN28A-202ENST00000326279 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
LIN28A-202ENST00000326279 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
LIN28A-202ENST00000326279 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
LIN28A-202ENST00000326279 NUDT16Q96DE0 195 aaKnown RBP17.07■□□□□ 0.32
LIN28A-202ENST00000326279 RGS3P49796 1198 aa17.07■□□□□ 0.32
LIN28A-202ENST00000326279 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
LIN28A-202ENST00000326279 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
LIN28A-202ENST00000326279 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
LIN28A-202ENST00000326279 DISP3Q9P2K9 1392 aa17.05■□□□□ 0.32
LIN28A-202ENST00000326279 RTEL1-TNFRSF6BF6WH68 1400 aa17.05■□□□□ 0.32
LIN28A-202ENST00000326279 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
LIN28A-202ENST00000326279 CDCA7LQ96GN5 454 aa17.04■□□□□ 0.32
LIN28A-202ENST00000326279 ATP10AO60312 1499 aa17.03■□□□□ 0.32
LIN28A-202ENST00000326279 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
LIN28A-202ENST00000326279 LTKP29376 864 aa17.02■□□□□ 0.32
LIN28A-202ENST00000326279 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
LIN28A-202ENST00000326279 NME9Q86XW9 330 aa17.02■□□□□ 0.32
LIN28A-202ENST00000326279 PPP2R1AP30153 589 aa17.02■□□□□ 0.31
LIN28A-202ENST00000326279 ZC3H6P61129 1189 aaKnown RBP17.02■□□□□ 0.31
LIN28A-202ENST00000326279 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
LIN28A-202ENST00000326279 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
LIN28A-202ENST00000326279 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
LIN28A-202ENST00000326279 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
LIN28A-202ENST00000326279 KCNA6P17658 529 aa17■□□□□ 0.31
LIN28A-202ENST00000326279 NPATQ14207 1427 aa17■□□□□ 0.31
LIN28A-202ENST00000326279 UGGT1Q9NYU2 1555 aa17■□□□□ 0.31
LIN28A-202ENST00000326279 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
LIN28A-202ENST00000326279 MYO5CQ9NQX4 1742 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
LIN28A-202ENST00000326279 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 NECTIN2Q92692 538 aa16.99■□□□□ 0.31
LIN28A-202ENST00000326279 NEO1Q92859 1461 aa16.98■□□□□ 0.31
LIN28A-202ENST00000326279 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
LIN28A-202ENST00000326279 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
LIN28A-202ENST00000326279 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
LIN28A-202ENST00000326279 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
LIN28A-202ENST00000326279 LRRIQ1Q96JM4 1722 aa16.97■□□□□ 0.31
LIN28A-202ENST00000326279 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
LIN28A-202ENST00000326279 EVA1CP58658 441 aa16.96■□□□□ 0.31
LIN28A-202ENST00000326279 NBR1Q14596 966 aa16.96■□□□□ 0.31
LIN28A-202ENST00000326279 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
LIN28A-202ENST00000326279 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
LIN28A-202ENST00000326279 TESK2Q96S53 571 aa16.96■□□□□ 0.31
LIN28A-202ENST00000326279 RIMS2Q9UQ26 1411 aa16.95■□□□□ 0.3
LIN28A-202ENST00000326279 RBM19Q9Y4C8 960 aaKnown RBP16.95■□□□□ 0.3
LIN28A-202ENST00000326279 ABCC1P33527 1531 aa16.95■□□□□ 0.3
LIN28A-202ENST00000326279 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
LIN28A-202ENST00000326279 EXOC6Q8TAG9 804 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms