RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 GRPEL1Q9HAV7 217 aa30.14■■■□□ 2.42
PACS2-201ENST00000325438 ESPNB1AK53 854 aa30.13■■■□□ 2.41
PACS2-201ENST00000325438 PCDHB15Q9Y5E8 787 aa30.13■■■□□ 2.41
PACS2-201ENST00000325438 C9orf84Q5VXU9 1444 aa30.13■■■□□ 2.41
PACS2-201ENST00000325438 CTTNBP2Q8WZ74 1663 aa30.13■■■□□ 2.41
PACS2-201ENST00000325438 JPH4Q96JJ6 628 aa30.13■■■□□ 2.41
PACS2-201ENST00000325438 LNPKQ9C0E8 428 aa30.12■■■□□ 2.41
PACS2-201ENST00000325438 DDX11L8A8MPP1 907 aa30.11■■■□□ 2.41
PACS2-201ENST00000325438 RBM10P98175 930 aaKnown RBP30.11■■■□□ 2.41
PACS2-201ENST00000325438 TCP11L2Q8N4U5 519 aa30.11■■■□□ 2.41
PACS2-201ENST00000325438 CC2D2AQ9P2K1 1620 aa30.09■■■□□ 2.41
PACS2-201ENST00000325438 GCC2Q8IWJ2 1684 aa30.08■■■□□ 2.41
PACS2-201ENST00000325438 FAM13BQ9NYF5 915 aa30.08■■■□□ 2.41
PACS2-201ENST00000325438 WWC1Q8IX03 1113 aa30.07■■■□□ 2.4
PACS2-201ENST00000325438 DDX49Q9Y6V7 483 aaKnown RBP30.07■■■□□ 2.4
PACS2-201ENST00000325438 TROQ12816 1431 aaPredicted RBP30.07■■■□□ 2.4
PACS2-201ENST00000325438 TBC1D32Q96NH3 1257 aa30.07■■■□□ 2.4
PACS2-201ENST00000325438 FOXD4L5Q5VV16 416 aaPredicted RBP30.06■■■□□ 2.4
PACS2-201ENST00000325438 FOXD4L4Q8WXT5 416 aaPredicted RBP30.06■■■□□ 2.4
PACS2-201ENST00000325438 APBB1O00213 710 aa30.06■■■□□ 2.4
PACS2-201ENST00000325438 TSR2Q969E8 191 aaKnown RBP30.05■■■□□ 2.4
PACS2-201ENST00000325438 RLBP1P12271 317 aa30.05■■■□□ 2.4
PACS2-201ENST00000325438 ZKSCAN2Q63HK3 967 aa30.04■■■□□ 2.4
PACS2-201ENST00000325438 DZIP1LQ8IYY4 767 aaKnown RBP30.04■■■□□ 2.4
PACS2-201ENST00000325438 DNTTIP2Q5QJE6 756 aaKnown RBP30.03■■■□□ 2.4
PACS2-201ENST00000325438 TRAK1Q9UPV9 953 aa30.03■■■□□ 2.4
PACS2-201ENST00000325438 EIF3AQ14152 1382 aaKnown RBP30.03■■■□□ 2.4
PACS2-201ENST00000325438 PTMAP06454 111 aaKnown RBP30.03■■■□□ 2.4
PACS2-201ENST00000325438 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
PACS2-201ENST00000325438 AMER1Q5JTC6 1135 aaPredicted RBP30.01■■■□□ 2.4
PACS2-201ENST00000325438 NKTRP30414 1462 aaKnown RBP30■■■□□ 2.39
PACS2-201ENST00000325438 RARSP54136 660 aaKnown RBP29.99■■■□□ 2.39
PACS2-201ENST00000325438 ANKRD45Q5TZF3 282 aa29.98■■■□□ 2.39
PACS2-201ENST00000325438 PLB1Q6P1J6 1458 aa29.98■■■□□ 2.39
PACS2-201ENST00000325438 USP19O94966 1318 aa29.98■■■□□ 2.39
PACS2-201ENST00000325438 KDM5CP41229 1560 aa29.98■■■□□ 2.39
PACS2-201ENST00000325438 CLCN1P35523 988 aa29.98■■■□□ 2.39
PACS2-201ENST00000325438 ELL2O00472 640 aaPredicted RBP29.98■■■□□ 2.39
PACS2-201ENST00000325438 CFAP70Q5T0N1 1121 aa29.98■■■□□ 2.39
PACS2-201ENST00000325438 KIAA0586Q9BVV6 1533 aa29.97■■■□□ 2.39
PACS2-201ENST00000325438 RRP9O43818 475 aaKnown RBP29.97■■■□□ 2.39
PACS2-201ENST00000325438 IQGAP2Q13576 1575 aa29.97■■■□□ 2.39
PACS2-201ENST00000325438 NUTM2DQ5VT03 806 aaPredicted RBP29.96■■■□□ 2.39
PACS2-201ENST00000325438 KIAA1211Q6ZU35 1233 aa29.95■■■□□ 2.39
PACS2-201ENST00000325438 R3HCC1Q9Y3T6 440 aaKnown RBP29.94■■■□□ 2.38
PACS2-201ENST00000325438 RUNDC1Q96C34 613 aa29.94■■■□□ 2.38
PACS2-201ENST00000325438 MTHFSP49914 203 aa29.94■■■□□ 2.38
PACS2-201ENST00000325438 GPATCH8Q9UKJ3 1502 aaKnown RBP29.93■■■□□ 2.38
PACS2-201ENST00000325438 PODXL2Q9NZ53 605 aa29.93■■■□□ 2.38
PACS2-201ENST00000325438 NASPP49321 788 aaPredicted RBP29.92■■■□□ 2.38
PACS2-201ENST00000325438 PLEKHH2Q8IVE3 1493 aa29.91■■■□□ 2.38
PACS2-201ENST00000325438 BLMP54132 1417 aaPredicted RBP29.91■■■□□ 2.38
PACS2-201ENST00000325438 FOXD4L6Q3SYB3 417 aaPredicted RBP29.91■■■□□ 2.38
PACS2-201ENST00000325438 FOXD4L3Q6VB84 417 aaPredicted RBP29.91■■■□□ 2.38
PACS2-201ENST00000325438 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
PACS2-201ENST00000325438 UHRF1BP1Q6BDS2 1440 aa29.91■■■□□ 2.38
PACS2-201ENST00000325438 PLCB2Q00722 1185 aa29.91■■■□□ 2.38
PACS2-201ENST00000325438 CALD1Q05682 793 aaKnown RBP29.91■■■□□ 2.38
PACS2-201ENST00000325438 PRAG1Q86YV5 1406 aa29.9■■■□□ 2.38
PACS2-201ENST00000325438 KIF14Q15058 1648 aa29.9■■■□□ 2.38
PACS2-201ENST00000325438 SLC12A5Q9H2X9 1139 aa29.89■■■□□ 2.38
PACS2-201ENST00000325438 CARMIL2Q6F5E8 1435 aa29.89■■■□□ 2.38
PACS2-201ENST00000325438 EXOSC9Q06265 439 aaKnown RBP29.89■■■□□ 2.38
PACS2-201ENST00000325438 TNPO1Q92973 898 aaKnown RBP29.89■■■□□ 2.38
PACS2-201ENST00000325438 ARHGEF11O15085 1522 aa29.89■■■□□ 2.38
PACS2-201ENST00000325438 C1orf115Q9H7X2 142 aa29.88■■■□□ 2.37
PACS2-201ENST00000325438 NUP153P49790 1475 aaKnown RBP29.88■■■□□ 2.37
PACS2-201ENST00000325438 ZMYM4Q5VZL5 1548 aa29.87■■■□□ 2.37
PACS2-201ENST00000325438 MCTP1Q6DN14 999 aa29.87■■■□□ 2.37
PACS2-201ENST00000325438 A0A0U1RQG5 324 aaPredicted RBP29.86■■■□□ 2.37
PACS2-201ENST00000325438 MVPQ14764 893 aaKnown RBP29.86■■■□□ 2.37
PACS2-201ENST00000325438 MPNDQ8N594 471 aa29.86■■■□□ 2.37
PACS2-201ENST00000325438 DNMT1P26358 1616 aaKnown RBP29.85■■■□□ 2.37
PACS2-201ENST00000325438 ABCA5Q8WWZ7 1642 aa29.85■■■□□ 2.37
PACS2-201ENST00000325438 ANTXR1Q9H6X2 564 aa29.85■■■□□ 2.37
PACS2-201ENST00000325438 NOL8Q76FK4 1167 aaKnown RBP29.84■■■□□ 2.37
PACS2-201ENST00000325438 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
PACS2-201ENST00000325438 MBD5Q9P267 1494 aa29.84■■■□□ 2.37
PACS2-201ENST00000325438 CAVIN1Q6NZI2 390 aaKnown RBP29.83■■■□□ 2.37
PACS2-201ENST00000325438 DDX19BQ9UMR2 479 aa29.81■■■□□ 2.36
PACS2-201ENST00000325438 LAMC3Q9Y6N6 1575 aa29.8■■■□□ 2.36
PACS2-201ENST00000325438 KIF3BO15066 747 aa29.8■■■□□ 2.36
PACS2-201ENST00000325438 STK26Q9P289 416 aa29.8■■■□□ 2.36
PACS2-201ENST00000325438 SLC24A1O60721 1099 aa29.8■■■□□ 2.36
PACS2-201ENST00000325438 SKOR2Q2VWA4 1001 aaPredicted RBP29.8■■■□□ 2.36
PACS2-201ENST00000325438 NOB1Q9ULX3 412 aaKnown RBP29.8■■■□□ 2.36
PACS2-201ENST00000325438 WDR62O43379 1518 aa29.79■■■□□ 2.36
PACS2-201ENST00000325438 RNF214Q8ND24 703 aa29.79■■■□□ 2.36
PACS2-201ENST00000325438 PLEKHG5O94827 1062 aa29.79■■■□□ 2.36
PACS2-201ENST00000325438 IPO8O15397 1037 aaKnown RBP29.78■■■□□ 2.36
PACS2-201ENST00000325438 SSFA2P28290 1259 aa29.78■■■□□ 2.36
PACS2-201ENST00000325438 TMEM132EQ6IEE7 984 aa29.78■■■□□ 2.36
PACS2-201ENST00000325438 RBM42Q9BTD8 480 aaKnown RBP29.78■■■□□ 2.36
PACS2-201ENST00000325438 ZNF521Q96K83 1311 aa29.77■■■□□ 2.36
PACS2-201ENST00000325438 RSPH4AQ5TD94 716 aa29.77■■■□□ 2.36
PACS2-201ENST00000325438 SRPK2P78362 688 aaKnown RBP29.74■■■□□ 2.35
PACS2-201ENST00000325438 COL17A1Q9UMD9 1497 aaPredicted RBP29.74■■■□□ 2.35
PACS2-201ENST00000325438 GAS2L3Q86XJ1 694 aa29.74■■■□□ 2.35
PACS2-201ENST00000325438 TMEM57Q8N5G2 664 aa29.74■■■□□ 2.35
PACS2-201ENST00000325438 SSH1Q8WYL5 1049 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms