RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 CHD2O14647 1828 aaKnown RBP28.09■■■□□ 2.09
SWI5-201ENST00000320188 POTEAQ6S8J7 498 aa28.09■■■□□ 2.09
SWI5-201ENST00000320188 SLC52A1Q9NWF4 448 aa28.09■■■□□ 2.09
SWI5-201ENST00000320188 CHIC2Q9UKJ5 165 aa28.09■■■□□ 2.09
SWI5-201ENST00000320188 GCC2Q8IWJ2 1684 aa28.08■■■□□ 2.09
SWI5-201ENST00000320188 RBM33Q96EV2 1170 aaKnown RBP28.08■■■□□ 2.09
SWI5-201ENST00000320188 RPRD2Q5VT52 1461 aaKnown RBP28.07■■■□□ 2.08
SWI5-201ENST00000320188 SETD1AO15047 1707 aaKnown RBP28.04■■■□□ 2.08
SWI5-201ENST00000320188 ADGRL2O95490 1459 aa28.03■■■□□ 2.08
SWI5-201ENST00000320188 JCADQ9P266 1359 aa28.02■■■□□ 2.08
SWI5-201ENST00000320188 PLEKHG1Q9ULL1 1385 aa28.01■■■□□ 2.07
SWI5-201ENST00000320188 PPP1R15AO75807 674 aaPredicted RBP28.01■■■□□ 2.07
SWI5-201ENST00000320188 SLAIN2Q9P270 581 aa28.01■■■□□ 2.07
SWI5-201ENST00000320188 HDGFP51858 240 aaKnown RBP28■■■□□ 2.07
SWI5-201ENST00000320188 ZFYVE9O95405 1425 aa28■■■□□ 2.07
SWI5-201ENST00000320188 TMEM131LA2VDJ0 1609 aa27.98■■■□□ 2.07
SWI5-201ENST00000320188 COL16A1Q07092 1604 aaPredicted RBP27.98■■■□□ 2.07
SWI5-201ENST00000320188 RIMS2Q9UQ26 1411 aa27.98■■■□□ 2.07
SWI5-201ENST00000320188 ANKRD50Q9ULJ7 1429 aa27.96■■■□□ 2.07
SWI5-201ENST00000320188 NCOA3Q9Y6Q9 1424 aa27.94■■■□□ 2.06
SWI5-201ENST00000320188 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
SWI5-201ENST00000320188 C14orf37Q86TY3 774 aa27.92■■■□□ 2.06
SWI5-201ENST00000320188 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.9■■■□□ 2.06
SWI5-201ENST00000320188 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.9■■■□□ 2.06
SWI5-201ENST00000320188 UNC13BO14795 1591 aa27.9■■■□□ 2.06
SWI5-201ENST00000320188 SHPRHQ149N8 1683 aa27.89■■■□□ 2.06
SWI5-201ENST00000320188 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
SWI5-201ENST00000320188 MEX3CQ5U5Q3 659 aaKnown RBP27.88■■■□□ 2.05
SWI5-201ENST00000320188 TBX22Q9Y458 520 aa27.88■■■□□ 2.05
SWI5-201ENST00000320188 AHDC1Q5TGY3 1603 aaPredicted RBP27.88■■■□□ 2.05
SWI5-201ENST00000320188 SPATA31A6Q5VVP1 1343 aa27.88■■■□□ 2.05
SWI5-201ENST00000320188 E9PCH4 1651 aa27.86■■■□□ 2.05
SWI5-201ENST00000320188 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
SWI5-201ENST00000320188 CADPS2Q86UW7 1296 aa27.85■■■□□ 2.05
SWI5-201ENST00000320188 LRP6O75581 1613 aa27.84■■■□□ 2.05
SWI5-201ENST00000320188 PIK3R4Q99570 1358 aa27.84■■■□□ 2.05
SWI5-201ENST00000320188 ATF3P18847 181 aa27.83■■■□□ 2.05
SWI5-201ENST00000320188 ZNF772Q68DY9 489 aaPredicted RBP27.83■■■□□ 2.05
SWI5-201ENST00000320188 TRPM2O94759 1503 aa27.82■■■□□ 2.04
SWI5-201ENST00000320188 ADAMTS13Q76LX8 1427 aa27.82■■■□□ 2.04
SWI5-201ENST00000320188 C19orf44Q9H6X5 657 aa27.8■■■□□ 2.04
SWI5-201ENST00000320188 IQGAP3Q86VI3 1631 aa27.79■■■□□ 2.04
SWI5-201ENST00000320188 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
SWI5-201ENST00000320188 TRIM52Q96A61 297 aa27.73■■■□□ 2.03
SWI5-201ENST00000320188 DCCP43146 1447 aa27.72■■■□□ 2.03
SWI5-201ENST00000320188 UPF1Q92900 1129 aaKnown RBP eCLIP27.69■■■□□ 2.02
SWI5-201ENST00000320188 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
SWI5-201ENST00000320188 XRN1Q8IZH2 1706 aaKnown RBP27.69■■■□□ 2.02
SWI5-201ENST00000320188 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
SWI5-201ENST00000320188 RXRBP28702 533 aa27.68■■■□□ 2.02
SWI5-201ENST00000320188 BRINP3Q76B58 766 aa27.68■■■□□ 2.02
SWI5-201ENST00000320188 ROCK1Q13464 1354 aa27.68■■■□□ 2.02
SWI5-201ENST00000320188 NHSL1Q5SYE7 1610 aa27.67■■■□□ 2.02
SWI5-201ENST00000320188 CDK12Q9NYV4 1490 aaPredicted RBP27.66■■■□□ 2.02
SWI5-201ENST00000320188 SPHKAPQ2M3C7 1700 aa27.66■■■□□ 2.02
SWI5-201ENST00000320188 PTPRUQ92729 1446 aa27.66■■■□□ 2.02
SWI5-201ENST00000320188 NUTM2BA6NNL0 878 aaPredicted RBP27.65■■■□□ 2.02
SWI5-201ENST00000320188 NUTM2EB1AL46 878 aaPredicted RBP27.65■■■□□ 2.02
SWI5-201ENST00000320188 NUTM2AQ8IVF1 878 aaPredicted RBP27.65■■■□□ 2.02
SWI5-201ENST00000320188 NRXN3Q9Y4C0 1643 aa27.65■■■□□ 2.02
SWI5-201ENST00000320188 SETBP1Q9Y6X0 1596 aa27.65■■■□□ 2.02
SWI5-201ENST00000320188 NUP155O75694 1391 aa27.62■■■□□ 2.01
SWI5-201ENST00000320188 SETD5Q9C0A6 1442 aa27.61■■■□□ 2.01
SWI5-201ENST00000320188 MST1RQ04912 1400 aa27.59■■■□□ 2.01
SWI5-201ENST00000320188 AFF2P51816 1311 aa27.59■■■□□ 2.01
SWI5-201ENST00000320188 NALCNQ8IZF0 1738 aa27.55■■■□□ 2
SWI5-201ENST00000320188 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
SWI5-201ENST00000320188 LRRC59Q96AG4 307 aaKnown RBP27.55■■■□□ 2
SWI5-201ENST00000320188 ADGRL3Q9HAR2 1447 aa27.53■■■□□ 2
SWI5-201ENST00000320188 KIF1BO60333 1816 aa27.51■■□□□ 1.99
SWI5-201ENST00000320188 C8orf37Q96NL8 207 aa27.5■■□□□ 1.99
SWI5-201ENST00000320188 METP08581 1390 aa27.49■■□□□ 1.99
SWI5-201ENST00000320188 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
SWI5-201ENST00000320188 RGS12O14924 1447 aa27.48■■□□□ 1.99
SWI5-201ENST00000320188 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
SWI5-201ENST00000320188 ITGAEP38570 1179 aa27.46■■□□□ 1.99
SWI5-201ENST00000320188 RBM6P78332 1123 aaKnown RBP27.46■■□□□ 1.99
SWI5-201ENST00000320188 CLTCL1P53675 1640 aa27.45■■□□□ 1.99
SWI5-201ENST00000320188 QTRT2Q9H974 415 aaKnown RBP27.44■■□□□ 1.98
SWI5-201ENST00000320188 LAMC1P11047 1609 aa27.43■■□□□ 1.98
SWI5-201ENST00000320188 DDX17Q92841 729 aaKnown RBP27.41■■□□□ 1.98
SWI5-201ENST00000320188 C1orf167Q5SNV9 1468 aa27.4■■□□□ 1.98
SWI5-201ENST00000320188 NGLY1Q96IV0 654 aa27.39■■□□□ 1.98
SWI5-201ENST00000320188 PTCH1Q13635 1447 aa27.39■■□□□ 1.97
SWI5-201ENST00000320188 ADAMTS2O95450 1211 aa27.36■■□□□ 1.97
SWI5-201ENST00000320188 ATAD2Q6PL18 1390 aa27.35■■□□□ 1.97
SWI5-201ENST00000320188 COL22A1Q8NFW1 1626 aaPredicted RBP27.31■■□□□ 1.96
SWI5-201ENST00000320188 USP21Q9UK80 565 aa27.3■■□□□ 1.96
SWI5-201ENST00000320188 SOS2Q07890 1332 aaPredicted RBP27.3■■□□□ 1.96
SWI5-201ENST00000320188 FOXD1Q16676 465 aa27.29■■□□□ 1.96
SWI5-201ENST00000320188 TRPC5Q9UL62 973 aaPredicted RBP27.29■■□□□ 1.96
SWI5-201ENST00000320188 MARF1Q9Y4F3 1742 aaKnown RBP27.28■■□□□ 1.96
SWI5-201ENST00000320188 PRAG1Q86YV5 1406 aa27.28■■□□□ 1.96
SWI5-201ENST00000320188 VGFO15240 615 aaPredicted RBP27.28■■□□□ 1.96
SWI5-201ENST00000320188 ROBO2Q9HCK4 1378 aa27.27■■□□□ 1.96
SWI5-201ENST00000320188 PPLO60437 1756 aa27.27■■□□□ 1.96
SWI5-201ENST00000320188 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
SWI5-201ENST00000320188 ORAI2Q96SN7 254 aa27.26■■□□□ 1.95
SWI5-201ENST00000320188 ATRNO75882 1429 aa27.23■■□□□ 1.95
SWI5-201ENST00000320188 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms