RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZC3H13Q5T200 1668 aaKnown RBP18.05■□□□□ 0.48
CPNE1-201ENST00000317677 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
CPNE1-201ENST00000317677 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
CPNE1-201ENST00000317677 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
CPNE1-201ENST00000317677 SYNMO15061 1565 aa18.02■□□□□ 0.48
CPNE1-201ENST00000317677 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.48
CPNE1-201ENST00000317677 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
CPNE1-201ENST00000317677 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.47
CPNE1-201ENST00000317677 ANP32CO43423 234 aa18.02■□□□□ 0.47
CPNE1-201ENST00000317677 NOS1P29475 1434 aa18.01■□□□□ 0.47
CPNE1-201ENST00000317677 PIK3C2BO00750 1634 aa18.01■□□□□ 0.47
CPNE1-201ENST00000317677 IQGAP1P46940 1657 aa18■□□□□ 0.47
CPNE1-201ENST00000317677 MYOM2P54296 1465 aa17.99■□□□□ 0.47
CPNE1-201ENST00000317677 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
CPNE1-201ENST00000317677 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
CPNE1-201ENST00000317677 CCER2I3L3R5 266 aa17.97■□□□□ 0.47
CPNE1-201ENST00000317677 PPLO60437 1756 aa17.96■□□□□ 0.47
CPNE1-201ENST00000317677 LMTK3Q96Q04 1460 aa17.96■□□□□ 0.47
CPNE1-201ENST00000317677 SETD1BQ9UPS6 1966 aaKnown RBP17.96■□□□□ 0.47
CPNE1-201ENST00000317677 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.46
CPNE1-201ENST00000317677 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
CPNE1-201ENST00000317677 ADGRF5Q8IZF2 1346 aa17.93■□□□□ 0.46
CPNE1-201ENST00000317677 STAC3Q96MF2 364 aa17.93■□□□□ 0.46
CPNE1-201ENST00000317677 CEBPAP49715 358 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-201ENST00000317677 TESK2Q96S53 571 aa17.93■□□□□ 0.46
CPNE1-201ENST00000317677 C3P01024 1663 aa17.92■□□□□ 0.46
CPNE1-201ENST00000317677 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
CPNE1-201ENST00000317677 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
CPNE1-201ENST00000317677 MYO5BQ9ULV0 1848 aa17.9■□□□□ 0.46
CPNE1-201ENST00000317677 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
CPNE1-201ENST00000317677 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
CPNE1-201ENST00000317677 PRKRIP1Q9H875 184 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-201ENST00000317677 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
CPNE1-201ENST00000317677 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
CPNE1-201ENST00000317677 SCAF11Q99590 1463 aaKnown RBP17.87■□□□□ 0.45
CPNE1-201ENST00000317677 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
CPNE1-201ENST00000317677 MSH5O43196 834 aa17.86■□□□□ 0.45
CPNE1-201ENST00000317677 HSPA2P54652 639 aa17.86■□□□□ 0.45
CPNE1-201ENST00000317677 CCDC184Q52MB2 194 aa17.86■□□□□ 0.45
CPNE1-201ENST00000317677 CFAP70Q5T0N1 1121 aa17.86■□□□□ 0.45
CPNE1-201ENST00000317677 ERVK-7P63135 1459 aa17.86■□□□□ 0.45
CPNE1-201ENST00000317677 TMEM131LA2VDJ0 1609 aa17.86■□□□□ 0.45
CPNE1-201ENST00000317677 PIK3C2GO75747 1445 aa17.85■□□□□ 0.45
CPNE1-201ENST00000317677 ZMYM3Q14202 1370 aa17.84■□□□□ 0.45
CPNE1-201ENST00000317677 IDI1Q13907 227 aa17.84■□□□□ 0.45
CPNE1-201ENST00000317677 FBXO31Q5XUX0 539 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-201ENST00000317677 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
CPNE1-201ENST00000317677 ADGRB1O14514 1584 aa17.82■□□□□ 0.44
CPNE1-201ENST00000317677 RPGRIP1LQ68CZ1 1315 aa17.81■□□□□ 0.44
CPNE1-201ENST00000317677 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
CPNE1-201ENST00000317677 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
CPNE1-201ENST00000317677 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
CPNE1-201ENST00000317677 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
CPNE1-201ENST00000317677 FKBP8Q14318 412 aa17.77■□□□□ 0.44
CPNE1-201ENST00000317677 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
CPNE1-201ENST00000317677 MYOM1P52179 1685 aa17.77■□□□□ 0.44
CPNE1-201ENST00000317677 TMF1P82094 1093 aa17.77■□□□□ 0.43
CPNE1-201ENST00000317677 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.43
CPNE1-201ENST00000317677 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
CPNE1-201ENST00000317677 ZFYVE9O95405 1425 aa17.74■□□□□ 0.43
CPNE1-201ENST00000317677 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
CPNE1-201ENST00000317677 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-201ENST00000317677 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
CPNE1-201ENST00000317677 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-201ENST00000317677 STRCQ7RTU9 1775 aa17.72■□□□□ 0.43
CPNE1-201ENST00000317677 KDM5AP29375 1690 aaKnown RBP17.72■□□□□ 0.43
CPNE1-201ENST00000317677 QRICH2Q9H0J4 1663 aa17.72■□□□□ 0.43
CPNE1-201ENST00000317677 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
CPNE1-201ENST00000317677 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
CPNE1-201ENST00000317677 A2ML1A8K2U0 1454 aa17.71■□□□□ 0.43
CPNE1-201ENST00000317677 VGFO15240 615 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-201ENST00000317677 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
CPNE1-201ENST00000317677 ZNF142P52746 1687 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-201ENST00000317677 DEKP35659 375 aaKnown RBP17.7■□□□□ 0.42
CPNE1-201ENST00000317677 BCANQ96GW7 911 aa17.7■□□□□ 0.42
CPNE1-201ENST00000317677 NEFLP07196 543 aa17.69■□□□□ 0.42
CPNE1-201ENST00000317677 ILDR1Q86SU0 546 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-201ENST00000317677 PANK3Q9H999 370 aa17.68■□□□□ 0.42
CPNE1-201ENST00000317677 CEP170BQ9Y4F5 1589 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-201ENST00000317677 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
CPNE1-201ENST00000317677 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-201ENST00000317677 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
CPNE1-201ENST00000317677 PARD3Q8TEW0 1356 aa17.67■□□□□ 0.42
CPNE1-201ENST00000317677 TNRQ92752 1358 aa17.66■□□□□ 0.42
CPNE1-201ENST00000317677 SETD1AO15047 1707 aaKnown RBP17.65■□□□□ 0.42
CPNE1-201ENST00000317677 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-201ENST00000317677 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-201ENST00000317677 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
CPNE1-201ENST00000317677 KTN1Q86UP2 1357 aaKnown RBP17.64■□□□□ 0.41
CPNE1-201ENST00000317677 FAM9BQ8IZU0 186 aa17.63■□□□□ 0.41
CPNE1-201ENST00000317677 RALBP1Q15311 655 aa17.62■□□□□ 0.41
CPNE1-201ENST00000317677 RIMS2Q9UQ26 1411 aa17.62■□□□□ 0.41
CPNE1-201ENST00000317677 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
CPNE1-201ENST00000317677 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
CPNE1-201ENST00000317677 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
CPNE1-201ENST00000317677 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
CPNE1-201ENST00000317677 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
CPNE1-201ENST00000317677 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
CPNE1-201ENST00000317677 TULP4Q9NRJ4 1543 aa17.61■□□□□ 0.41
CPNE1-201ENST00000317677 NLRP1Q9C000 1473 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms