RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
AFF3-201ENST00000317233 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
AFF3-201ENST00000317233 C1orf141Q5JVX7 400 aa15.97■□□□□ 0.15
AFF3-201ENST00000317233 DIAPH3Q9NSV4 1193 aa15.97■□□□□ 0.15
AFF3-201ENST00000317233 DDX49Q9Y6V7 483 aaKnown RBP15.97■□□□□ 0.15
AFF3-201ENST00000317233 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
AFF3-201ENST00000317233 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
AFF3-201ENST00000317233 TRIM21P19474 475 aaKnown RBP15.96■□□□□ 0.15
AFF3-201ENST00000317233 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
AFF3-201ENST00000317233 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
AFF3-201ENST00000317233 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
AFF3-201ENST00000317233 EID1Q9Y6B2 187 aa15.96■□□□□ 0.14
AFF3-201ENST00000317233 BCCIPQ9P287 314 aaKnown RBP eCLIP15.95■□□□□ 0.14
AFF3-201ENST00000317233 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
AFF3-201ENST00000317233 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
AFF3-201ENST00000317233 XBP1P17861 261 aa15.95■□□□□ 0.14
AFF3-201ENST00000317233 LTV1Q96GA3 475 aaPredicted RBP15.95■□□□□ 0.14
AFF3-201ENST00000317233 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
AFF3-201ENST00000317233 KTN1Q86UP2 1357 aaKnown RBP15.94■□□□□ 0.14
AFF3-201ENST00000317233 NAT10Q9H0A0 1025 aaKnown RBP15.94■□□□□ 0.14
AFF3-201ENST00000317233 SYTL4Q96C24 671 aaPredicted RBP15.93■□□□□ 0.14
AFF3-201ENST00000317233 RNF20Q5VTR2 975 aa15.92■□□□□ 0.14
AFF3-201ENST00000317233 C9orf78Q9NZ63 289 aaPredicted RBP15.92■□□□□ 0.14
AFF3-201ENST00000317233 CT47B1P0C2W7 299 aaPredicted RBP15.92■□□□□ 0.14
AFF3-201ENST00000317233 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
AFF3-201ENST00000317233 EIF3AQ14152 1382 aaKnown RBP15.92■□□□□ 0.14
AFF3-201ENST00000317233 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
AFF3-201ENST00000317233 PDCL3Q9H2J4 239 aa15.91■□□□□ 0.14
AFF3-201ENST00000317233 AXDND1Q5T1B0 1012 aaPredicted RBP15.91■□□□□ 0.14
AFF3-201ENST00000317233 PDILTQ8N807 584 aa15.91■□□□□ 0.14
AFF3-201ENST00000317233 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
AFF3-201ENST00000317233 PPM1EQ8WY54 764 aa15.91■□□□□ 0.14
AFF3-201ENST00000317233 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
AFF3-201ENST00000317233 LEKR1Q6ZMV7 388 aa15.9■□□□□ 0.14
AFF3-201ENST00000317233 WDR70Q9NW82 654 aa15.9■□□□□ 0.14
AFF3-201ENST00000317233 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
AFF3-201ENST00000317233 FEZ1Q99689 392 aa15.9■□□□□ 0.14
AFF3-201ENST00000317233 DDX23Q9BUQ8 820 aaKnown RBP15.9■□□□□ 0.14
AFF3-201ENST00000317233 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
AFF3-201ENST00000317233 KIAA0754O94854 1291 aa15.89■□□□□ 0.14
AFF3-201ENST00000317233 MAGEC2Q9UBF1 373 aaPredicted RBP15.89■□□□□ 0.14
AFF3-201ENST00000317233 STAMBPO95630 424 aa15.89■□□□□ 0.13
AFF3-201ENST00000317233 TERF2IPQ9NYB0 399 aa15.89■□□□□ 0.13
AFF3-201ENST00000317233 SMARCE1Q969G3 411 aa15.89■□□□□ 0.13
AFF3-201ENST00000317233 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
AFF3-201ENST00000317233 LUC7LQ9NQ29 371 aaKnown RBP15.89■□□□□ 0.13
AFF3-201ENST00000317233 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
AFF3-201ENST00000317233 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
AFF3-201ENST00000317233 SLC4A3P48751 1232 aa15.88■□□□□ 0.13
AFF3-201ENST00000317233 FAM13BQ9NYF5 915 aa15.88■□□□□ 0.13
AFF3-201ENST00000317233 TMEM87AQ8NBN3 555 aa15.88■□□□□ 0.13
AFF3-201ENST00000317233 ANO2Q9NQ90 1003 aa15.87■□□□□ 0.13
AFF3-201ENST00000317233 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
AFF3-201ENST00000317233 CCDC112Q8NEF3 446 aa15.87■□□□□ 0.13
AFF3-201ENST00000317233 DNAI2Q9GZS0 605 aa15.87■□□□□ 0.13
AFF3-201ENST00000317233 KIF3BO15066 747 aa15.86■□□□□ 0.13
AFF3-201ENST00000317233 TXLNAP40222 546 aa15.86■□□□□ 0.13
AFF3-201ENST00000317233 FYB1O15117 783 aa15.86■□□□□ 0.13
AFF3-201ENST00000317233 RABEP1Q15276 862 aa15.86■□□□□ 0.13
AFF3-201ENST00000317233 CCDC73Q6ZRK6 1079 aa15.86■□□□□ 0.13
AFF3-201ENST00000317233 RALYLQ86SE5 291 aaKnown RBP15.86■□□□□ 0.13
AFF3-201ENST00000317233 KRT18P05783 430 aaKnown RBP15.85■□□□□ 0.13
AFF3-201ENST00000317233 CCDC91Q7Z6B0 441 aa15.85■□□□□ 0.13
AFF3-201ENST00000317233 TAX1BP1Q86VP1 789 aa15.85■□□□□ 0.13
AFF3-201ENST00000317233 GGT6Q6P531 493 aa15.85■□□□□ 0.13
AFF3-201ENST00000317233 CEP63Q96MT8 703 aa15.85■□□□□ 0.13
AFF3-201ENST00000317233 CCDC66A2RUB6 948 aa15.84■□□□□ 0.13
AFF3-201ENST00000317233 FILIP1LQ4L180 1135 aa15.84■□□□□ 0.13
AFF3-201ENST00000317233 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
AFF3-201ENST00000317233 TEFQ10587 303 aa15.84■□□□□ 0.13
AFF3-201ENST00000317233 REC8O95072 547 aa15.83■□□□□ 0.13
AFF3-201ENST00000317233 ANAPC15P60006 121 aa15.83■□□□□ 0.12
AFF3-201ENST00000317233 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
AFF3-201ENST00000317233 RALBP1Q15311 655 aa15.83■□□□□ 0.12
AFF3-201ENST00000317233 CLIP1P30622 1438 aa15.82■□□□□ 0.12
AFF3-201ENST00000317233 GOLGA6L10A0A0M3HER8 536 aa15.82■□□□□ 0.12
AFF3-201ENST00000317233 ZNHIT6Q9NWK9 470 aaKnown RBP15.82■□□□□ 0.12
AFF3-201ENST00000317233 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
AFF3-201ENST00000317233 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
AFF3-201ENST00000317233 FOXD1Q16676 465 aa15.82■□□□□ 0.12
AFF3-201ENST00000317233 TXLNBQ8N3L3 684 aa15.82■□□□□ 0.12
AFF3-201ENST00000317233 MATR3P43243 847 aaKnown RBP eCLIP15.81■□□□□ 0.12
AFF3-201ENST00000317233 SPATA24Q86W54 205 aa15.81■□□□□ 0.12
AFF3-201ENST00000317233 CENPHQ9H3R5 247 aa15.81■□□□□ 0.12
AFF3-201ENST00000317233 DDX58O95786 925 aaKnown RBP15.81■□□□□ 0.12
AFF3-201ENST00000317233 TAF3Q5VWG9 929 aa15.81■□□□□ 0.12
AFF3-201ENST00000317233 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
AFF3-201ENST00000317233 SLC3A2P08195 630 aaKnown RBP15.81■□□□□ 0.12
AFF3-201ENST00000317233 BCL11BQ9C0K0 894 aaPredicted RBP15.8■□□□□ 0.12
AFF3-201ENST00000317233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.8■□□□□ 0.12
AFF3-201ENST00000317233 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
AFF3-201ENST00000317233 FOSBP53539 338 aa15.8■□□□□ 0.12
AFF3-201ENST00000317233 CFAP57Q96MR6 1250 aa15.8■□□□□ 0.12
AFF3-201ENST00000317233 CLUAP1Q96AJ1 413 aa15.8■□□□□ 0.12
AFF3-201ENST00000317233 CCDC181Q5TID7 509 aa15.8■□□□□ 0.12
AFF3-201ENST00000317233 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
AFF3-201ENST00000317233 SART3Q15020 963 aaKnown RBP15.79■□□□□ 0.12
AFF3-201ENST00000317233 HOMER2Q9NSB8 354 aa15.79■□□□□ 0.12
AFF3-201ENST00000317233 CENPJQ9HC77 1338 aaPredicted RBP15.79■□□□□ 0.12
AFF3-201ENST00000317233 CCP110O43303 1012 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms