RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 CFAP70Q5T0N1 1121 aa22.02■■□□□ 1.12
CALR-201ENST00000316448 POLR1AO95602 1720 aaPredicted RBP22.02■■□□□ 1.12
CALR-201ENST00000316448 NRXN1Q9ULB1 1477 aa22.02■■□□□ 1.12
CALR-201ENST00000316448 SPATA31D1Q6ZQQ2 1576 aa22.01■■□□□ 1.11
CALR-201ENST00000316448 NUTM2DQ5VT03 806 aaPredicted RBP22.01■■□□□ 1.11
CALR-201ENST00000316448 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
CALR-201ENST00000316448 RPGRIP1LQ68CZ1 1315 aa22■■□□□ 1.11
CALR-201ENST00000316448 LAMC1P11047 1609 aa22■■□□□ 1.11
CALR-201ENST00000316448 PPLO60437 1756 aa21.99■■□□□ 1.11
CALR-201ENST00000316448 TMEM131LA2VDJ0 1609 aa21.99■■□□□ 1.11
CALR-201ENST00000316448 CENPBP07199 599 aaPredicted RBP21.98■■□□□ 1.11
CALR-201ENST00000316448 NEXMIFQ5QGS0 1516 aa21.97■■□□□ 1.11
CALR-201ENST00000316448 MYO5BQ9ULV0 1848 aa21.97■■□□□ 1.11
CALR-201ENST00000316448 CEBPAP49715 358 aaPredicted RBP21.94■■□□□ 1.1
CALR-201ENST00000316448 TESK2Q96S53 571 aa21.94■■□□□ 1.1
CALR-201ENST00000316448 PIK3C2GO75747 1445 aa21.94■■□□□ 1.1
CALR-201ENST00000316448 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
CALR-201ENST00000316448 C14orf93Q9H972 538 aaKnown RBP21.92■■□□□ 1.1
CALR-201ENST00000316448 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
CALR-201ENST00000316448 VGFO15240 615 aaPredicted RBP21.9■■□□□ 1.1
CALR-201ENST00000316448 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
CALR-201ENST00000316448 YTHDC1Q96MU7 727 aaKnown RBP21.9■■□□□ 1.1
CALR-201ENST00000316448 SCAF11Q99590 1463 aaKnown RBP21.89■■□□□ 1.1
CALR-201ENST00000316448 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
CALR-201ENST00000316448 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
CALR-201ENST00000316448 TNRQ92752 1358 aa21.88■■□□□ 1.09
CALR-201ENST00000316448 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
CALR-201ENST00000316448 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
CALR-201ENST00000316448 TMEM132EQ6IEE7 984 aa21.87■■□□□ 1.09
CALR-201ENST00000316448 DISP3Q9P2K9 1392 aa21.85■■□□□ 1.09
CALR-201ENST00000316448 ADGRB1O14514 1584 aa21.84■■□□□ 1.09
CALR-201ENST00000316448 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
CALR-201ENST00000316448 FER1L4A9Z1Z3 1794 aa21.83■■□□□ 1.08
CALR-201ENST00000316448 C3P01024 1663 aa21.83■■□□□ 1.08
CALR-201ENST00000316448 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
CALR-201ENST00000316448 ANP32CO43423 234 aa21.81■■□□□ 1.08
CALR-201ENST00000316448 RIMS2Q9UQ26 1411 aa21.81■■□□□ 1.08
CALR-201ENST00000316448 CCER2I3L3R5 266 aa21.79■■□□□ 1.08
CALR-201ENST00000316448 TRAK1Q9UPV9 953 aa21.79■■□□□ 1.08
CALR-201ENST00000316448 TMF1P82094 1093 aa21.77■■□□□ 1.08
CALR-201ENST00000316448 ASXL1Q8IXJ9 1541 aa21.77■■□□□ 1.08
CALR-201ENST00000316448 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
CALR-201ENST00000316448 EIF3AQ14152 1382 aaKnown RBP21.74■■□□□ 1.07
CALR-201ENST00000316448 UBR1Q8IWV7 1749 aa21.74■■□□□ 1.07
CALR-201ENST00000316448 ALKQ9UM73 1620 aa21.72■■□□□ 1.07
CALR-201ENST00000316448 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
CALR-201ENST00000316448 ADAMTSL3P82987 1691 aa21.71■■□□□ 1.07
CALR-201ENST00000316448 TMEM2Q9UHN6 1383 aa21.71■■□□□ 1.07
CALR-201ENST00000316448 PTPRMP28827 1452 aa21.71■■□□□ 1.07
CALR-201ENST00000316448 RIMS1Q86UR5 1692 aaKnown RBP21.71■■□□□ 1.07
CALR-201ENST00000316448 STK26Q9P289 416 aa21.7■■□□□ 1.07
CALR-201ENST00000316448 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.06
CALR-201ENST00000316448 CENPJQ9HC77 1338 aaPredicted RBP21.7■■□□□ 1.06
CALR-201ENST00000316448 PRKRIP1Q9H875 184 aaPredicted RBP21.7■■□□□ 1.06
CALR-201ENST00000316448 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.69■■□□□ 1.06
CALR-201ENST00000316448 KDM5AP29375 1690 aaKnown RBP21.69■■□□□ 1.06
CALR-201ENST00000316448 LTKP29376 864 aa21.68■■□□□ 1.06
CALR-201ENST00000316448 NRXN3Q9Y4C0 1643 aa21.67■■□□□ 1.06
CALR-201ENST00000316448 PER1O15534 1290 aaPredicted RBP21.66■■□□□ 1.06
CALR-201ENST00000316448 YTHDC2Q9H6S0 1430 aaKnown RBP21.65■■□□□ 1.06
CALR-201ENST00000316448 SBNO2Q9Y2G9 1366 aa21.65■■□□□ 1.06
CALR-201ENST00000316448 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
CALR-201ENST00000316448 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
CALR-201ENST00000316448 PANK3Q9H999 370 aa21.65■■□□□ 1.06
CALR-201ENST00000316448 SETD1AO15047 1707 aaKnown RBP21.64■■□□□ 1.06
CALR-201ENST00000316448 ARHGEF28Q8N1W1 1705 aaKnown RBP21.64■■□□□ 1.06
CALR-201ENST00000316448 HDGFP51858 240 aaKnown RBP21.63■■□□□ 1.05
CALR-201ENST00000316448 METP08581 1390 aa21.62■■□□□ 1.05
CALR-201ENST00000316448 TXNDC2Q86VQ3 553 aa21.62■■□□□ 1.05
CALR-201ENST00000316448 QRICH2Q9H0J4 1663 aa21.62■■□□□ 1.05
CALR-201ENST00000316448 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
CALR-201ENST00000316448 CDCA8Q53HL2 280 aa21.61■■□□□ 1.05
CALR-201ENST00000316448 ARHGAP23Q9P227 1491 aa21.6■■□□□ 1.05
CALR-201ENST00000316448 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
CALR-201ENST00000316448 SLIT1O75093 1534 aa21.59■■□□□ 1.05
CALR-201ENST00000316448 ADAMTS13Q76LX8 1427 aa21.58■■□□□ 1.05
CALR-201ENST00000316448 LRPPRCP42704 1394 aaKnown RBP21.58■■□□□ 1.05
CALR-201ENST00000316448 SLC24A1O60721 1099 aa21.58■■□□□ 1.04
CALR-201ENST00000316448 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.04
CALR-201ENST00000316448 MYOM1P52179 1685 aa21.57■■□□□ 1.04
CALR-201ENST00000316448 PLEKHG1Q9ULL1 1385 aa21.56■■□□□ 1.04
CALR-201ENST00000316448 BCANQ96GW7 911 aa21.56■■□□□ 1.04
CALR-201ENST00000316448 WAPLQ7Z5K2 1190 aa21.55■■□□□ 1.04
CALR-201ENST00000316448 GTF3C3Q9Y5Q9 886 aa21.55■■□□□ 1.04
CALR-201ENST00000316448 TULP4Q9NRJ4 1543 aa21.55■■□□□ 1.04
CALR-201ENST00000316448 ABCC11Q96J66 1382 aa21.55■■□□□ 1.04
CALR-201ENST00000316448 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
CALR-201ENST00000316448 CEP170BQ9Y4F5 1589 aaPredicted RBP21.54■■□□□ 1.04
CALR-201ENST00000316448 POGKQ9P215 609 aa21.53■■□□□ 1.04
CALR-201ENST00000316448 EID1Q9Y6B2 187 aa21.53■■□□□ 1.04
CALR-201ENST00000316448 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.04
CALR-201ENST00000316448 MED14O60244 1454 aa21.52■■□□□ 1.04
CALR-201ENST00000316448 SLC26A8Q96RN1 970 aa21.52■■□□□ 1.04
CALR-201ENST00000316448 DLC1Q96QB1 1528 aa21.51■■□□□ 1.03
CALR-201ENST00000316448 CABP2Q9NPB3 220 aa21.51■■□□□ 1.03
CALR-201ENST00000316448 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
CALR-201ENST00000316448 CARD14Q9BXL6 1004 aa21.5■■□□□ 1.03
CALR-201ENST00000316448 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
CALR-201ENST00000316448 CC2D1BQ5T0F9 858 aaKnown RBP21.49■■□□□ 1.03
CALR-201ENST00000316448 PTPRUQ92729 1446 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms