RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 CASC1Q6TDU7 716 aa13.83□□□□□ -0.2
HNF4A-201ENST00000316099 ATP7AQ04656 1500 aa13.83□□□□□ -0.2
HNF4A-201ENST00000316099 DNTTIP2Q5QJE6 756 aaKnown RBP13.82□□□□□ -0.2
HNF4A-201ENST00000316099 LMOD2Q6P5Q4 547 aa13.82□□□□□ -0.2
HNF4A-201ENST00000316099 A2MP01023 1474 aa13.82□□□□□ -0.2
HNF4A-201ENST00000316099 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
HNF4A-201ENST00000316099 MAST1Q9Y2H9 1570 aa13.8□□□□□ -0.2
HNF4A-201ENST00000316099 ABCC1P33527 1531 aa13.8□□□□□ -0.2
HNF4A-201ENST00000316099 CENPJQ9HC77 1338 aaPredicted RBP13.8□□□□□ -0.2
HNF4A-201ENST00000316099 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
HNF4A-201ENST00000316099 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
HNF4A-201ENST00000316099 SOX12O15370 315 aa13.78□□□□□ -0.2
HNF4A-201ENST00000316099 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
HNF4A-201ENST00000316099 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
HNF4A-201ENST00000316099 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.2
HNF4A-201ENST00000316099 EVC2Q86UK5 1308 aa13.77□□□□□ -0.2
HNF4A-201ENST00000316099 ARHGEF12Q9NZN5 1544 aa13.77□□□□□ -0.2
HNF4A-201ENST00000316099 RGS3P49796 1198 aa13.77□□□□□ -0.2
HNF4A-201ENST00000316099 CCDC184Q52MB2 194 aa13.77□□□□□ -0.21
HNF4A-201ENST00000316099 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
HNF4A-201ENST00000316099 PRAG1Q86YV5 1406 aa13.76□□□□□ -0.21
HNF4A-201ENST00000316099 MS4A1P11836 297 aa13.76□□□□□ -0.21
HNF4A-201ENST00000316099 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
HNF4A-201ENST00000316099 ADGRF5Q8IZF2 1346 aa13.75□□□□□ -0.21
HNF4A-201ENST00000316099 CFAP74Q9C0B2 1584 aa13.75□□□□□ -0.21
HNF4A-201ENST00000316099 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
HNF4A-201ENST00000316099 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
HNF4A-201ENST00000316099 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
HNF4A-201ENST00000316099 EID1Q9Y6B2 187 aa13.74□□□□□ -0.21
HNF4A-201ENST00000316099 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
HNF4A-201ENST00000316099 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
HNF4A-201ENST00000316099 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
HNF4A-201ENST00000316099 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
HNF4A-201ENST00000316099 HSCBQ8IWL3 235 aa13.72□□□□□ -0.21
HNF4A-201ENST00000316099 CCDC146Q8IYE0 955 aa13.72□□□□□ -0.21
HNF4A-201ENST00000316099 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
HNF4A-201ENST00000316099 MSNP26038 577 aaKnown RBP13.72□□□□□ -0.21
HNF4A-201ENST00000316099 NOS1P29475 1434 aa13.71□□□□□ -0.21
HNF4A-201ENST00000316099 PTMSP20962 102 aa13.71□□□□□ -0.21
HNF4A-201ENST00000316099 POGZQ7Z3K3 1410 aa13.71□□□□□ -0.21
HNF4A-201ENST00000316099 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
HNF4A-201ENST00000316099 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
HNF4A-201ENST00000316099 PLXNC1O60486 1568 aa13.71□□□□□ -0.22
HNF4A-201ENST00000316099 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
HNF4A-201ENST00000316099 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
HNF4A-201ENST00000316099 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
HNF4A-201ENST00000316099 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.7□□□□□ -0.22
HNF4A-201ENST00000316099 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
HNF4A-201ENST00000316099 BRD4O60885 1362 aaPredicted RBP13.69□□□□□ -0.22
HNF4A-201ENST00000316099 CFAP65Q6ZU64 1925 aaKnown RBP13.69□□□□□ -0.22
HNF4A-201ENST00000316099 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
HNF4A-201ENST00000316099 IPO9Q96P70 1041 aaKnown RBP13.69□□□□□ -0.22
HNF4A-201ENST00000316099 IDI1Q13907 227 aa13.69□□□□□ -0.22
HNF4A-201ENST00000316099 DISP3Q9P2K9 1392 aa13.69□□□□□ -0.22
HNF4A-201ENST00000316099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.69□□□□□ -0.22
HNF4A-201ENST00000316099 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
HNF4A-201ENST00000316099 ZFYVE16Q7Z3T8 1539 aa13.68□□□□□ -0.22
HNF4A-201ENST00000316099 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
HNF4A-201ENST00000316099 GOLGA6L6A8MZA4 724 aa13.68□□□□□ -0.22
HNF4A-201ENST00000316099 SCAF11Q99590 1463 aaKnown RBP13.68□□□□□ -0.22
HNF4A-201ENST00000316099 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
HNF4A-201ENST00000316099 CHAF1AQ13111 956 aaPredicted RBP13.67□□□□□ -0.22
HNF4A-201ENST00000316099 NEO1Q92859 1461 aa13.67□□□□□ -0.22
HNF4A-201ENST00000316099 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
HNF4A-201ENST00000316099 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
HNF4A-201ENST00000316099 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
HNF4A-201ENST00000316099 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
HNF4A-201ENST00000316099 ARAP3Q8WWN8 1544 aa13.66□□□□□ -0.22
HNF4A-201ENST00000316099 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
HNF4A-201ENST00000316099 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
HNF4A-201ENST00000316099 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
HNF4A-201ENST00000316099 FRAT1Q92837 279 aaPredicted RBP13.65□□□□□ -0.22
HNF4A-201ENST00000316099 IQGAP3Q86VI3 1631 aa13.65□□□□□ -0.22
HNF4A-201ENST00000316099 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
HNF4A-201ENST00000316099 UNC13BO14795 1591 aa13.64□□□□□ -0.23
HNF4A-201ENST00000316099 PPP2R1AP30153 589 aa13.63□□□□□ -0.23
HNF4A-201ENST00000316099 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
HNF4A-201ENST00000316099 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
HNF4A-201ENST00000316099 USP35Q9P2H5 1018 aa13.62□□□□□ -0.23
HNF4A-201ENST00000316099 ATP10AO60312 1499 aa13.62□□□□□ -0.23
HNF4A-201ENST00000316099 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
HNF4A-201ENST00000316099 HECW2Q9P2P5 1572 aa13.62□□□□□ -0.23
HNF4A-201ENST00000316099 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
HNF4A-201ENST00000316099 GBP4Q96PP9 640 aa13.61□□□□□ -0.23
HNF4A-201ENST00000316099 NRDCO43847 1150 aa13.61□□□□□ -0.23
HNF4A-201ENST00000316099 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
HNF4A-201ENST00000316099 PLCB2Q00722 1185 aa13.6□□□□□ -0.23
HNF4A-201ENST00000316099 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
HNF4A-201ENST00000316099 PPP6R1Q9UPN7 881 aa13.6□□□□□ -0.23
HNF4A-201ENST00000316099 SPATA31E1Q6ZUB1 1445 aa13.59□□□□□ -0.23
HNF4A-201ENST00000316099 YEATS2Q9ULM3 1422 aa13.59□□□□□ -0.23
HNF4A-201ENST00000316099 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
HNF4A-201ENST00000316099 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
HNF4A-201ENST00000316099 KDM5CP41229 1560 aa13.59□□□□□ -0.23
HNF4A-201ENST00000316099 TESK2Q96S53 571 aa13.58□□□□□ -0.24
HNF4A-201ENST00000316099 CDK19Q9BWU1 502 aa13.58□□□□□ -0.24
HNF4A-201ENST00000316099 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
HNF4A-201ENST00000316099 TRPM2O94759 1503 aa13.58□□□□□ -0.24
HNF4A-201ENST00000316099 PLA2R1Q13018 1463 aa13.58□□□□□ -0.24
HNF4A-201ENST00000316099 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms