RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.41
TPM3-203ENST00000312970 NOS1P29475 1434 aa12.49□□□□□ -0.41
TPM3-203ENST00000312970 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
TPM3-203ENST00000312970 EFCAB6Q5THR3 1501 aa12.48□□□□□ -0.41
TPM3-203ENST00000312970 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
TPM3-203ENST00000312970 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.41
TPM3-203ENST00000312970 ROCK1Q13464 1354 aa12.46□□□□□ -0.41
TPM3-203ENST00000312970 KCNA6P17658 529 aa12.46□□□□□ -0.41
TPM3-203ENST00000312970 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
TPM3-203ENST00000312970 BCANQ96GW7 911 aa12.46□□□□□ -0.41
TPM3-203ENST00000312970 SLC26A8Q96RN1 970 aa12.46□□□□□ -0.41
TPM3-203ENST00000312970 ZBTB22O15209 634 aa12.45□□□□□ -0.42
TPM3-203ENST00000312970 ITGAEP38570 1179 aa12.45□□□□□ -0.42
TPM3-203ENST00000312970 ADGRB3O60242 1522 aa12.45□□□□□ -0.42
TPM3-203ENST00000312970 PROSER2Q86WR7 435 aaPredicted RBP12.44□□□□□ -0.42
TPM3-203ENST00000312970 TET3O43151 1660 aa12.44□□□□□ -0.42
TPM3-203ENST00000312970 MYO5BQ9ULV0 1848 aa12.43□□□□□ -0.42
TPM3-203ENST00000312970 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
TPM3-203ENST00000312970 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
TPM3-203ENST00000312970 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
TPM3-203ENST00000312970 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
TPM3-203ENST00000312970 TMEM94Q12767 1356 aa12.42□□□□□ -0.42
TPM3-203ENST00000312970 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
TPM3-203ENST00000312970 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
TPM3-203ENST00000312970 PPP1R15AO75807 674 aaPredicted RBP12.41□□□□□ -0.42
TPM3-203ENST00000312970 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
TPM3-203ENST00000312970 GCC2Q8IWJ2 1684 aa12.41□□□□□ -0.42
TPM3-203ENST00000312970 NUP155O75694 1391 aa12.41□□□□□ -0.42
TPM3-203ENST00000312970 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.42
TPM3-203ENST00000312970 UNC13BO14795 1591 aa12.39□□□□□ -0.43
TPM3-203ENST00000312970 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
TPM3-203ENST00000312970 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
TPM3-203ENST00000312970 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
TPM3-203ENST00000312970 PLEKHG1Q9ULL1 1385 aa12.39□□□□□ -0.43
TPM3-203ENST00000312970 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
TPM3-203ENST00000312970 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
TPM3-203ENST00000312970 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
TPM3-203ENST00000312970 E9PCH4 1651 aa12.36□□□□□ -0.43
TPM3-203ENST00000312970 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
TPM3-203ENST00000312970 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM3-203ENST00000312970 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
TPM3-203ENST00000312970 IQGAP3Q86VI3 1631 aa12.36□□□□□ -0.43
TPM3-203ENST00000312970 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
TPM3-203ENST00000312970 MSH6P52701 1360 aa12.34□□□□□ -0.43
TPM3-203ENST00000312970 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
TPM3-203ENST00000312970 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
TPM3-203ENST00000312970 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
TPM3-203ENST00000312970 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
TPM3-203ENST00000312970 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
TPM3-203ENST00000312970 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
TPM3-203ENST00000312970 COL16A1Q07092 1604 aaPredicted RBP12.3□□□□□ -0.44
TPM3-203ENST00000312970 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
TPM3-203ENST00000312970 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
TPM3-203ENST00000312970 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
TPM3-203ENST00000312970 C19orf44Q9H6X5 657 aa12.29□□□□□ -0.44
TPM3-203ENST00000312970 JCADQ9P266 1359 aa12.29□□□□□ -0.44
TPM3-203ENST00000312970 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.28□□□□□ -0.44
TPM3-203ENST00000312970 ATF3P18847 181 aa12.28□□□□□ -0.44
TPM3-203ENST00000312970 CADPS2Q86UW7 1296 aa12.28□□□□□ -0.44
TPM3-203ENST00000312970 NAIPQ13075 1403 aa12.28□□□□□ -0.44
TPM3-203ENST00000312970 LRP6O75581 1613 aa12.26□□□□□ -0.45
TPM3-203ENST00000312970 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
TPM3-203ENST00000312970 TRPM2O94759 1503 aa12.26□□□□□ -0.45
TPM3-203ENST00000312970 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
TPM3-203ENST00000312970 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
TPM3-203ENST00000312970 SPHKAPQ2M3C7 1700 aa12.25□□□□□ -0.45
TPM3-203ENST00000312970 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
TPM3-203ENST00000312970 PTPRUQ92729 1446 aa12.24□□□□□ -0.45
TPM3-203ENST00000312970 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
TPM3-203ENST00000312970 RXRBP28702 533 aa12.23□□□□□ -0.45
TPM3-203ENST00000312970 MEX3CQ5U5Q3 659 aaKnown RBP12.23□□□□□ -0.45
TPM3-203ENST00000312970 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
TPM3-203ENST00000312970 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
TPM3-203ENST00000312970 HFM1A2PYH4 1435 aa12.22□□□□□ -0.45
TPM3-203ENST00000312970 METP08581 1390 aa12.21□□□□□ -0.45
TPM3-203ENST00000312970 SPATA31A6Q5VVP1 1343 aa12.21□□□□□ -0.45
TPM3-203ENST00000312970 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
TPM3-203ENST00000312970 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
TPM3-203ENST00000312970 DCCP43146 1447 aa12.2□□□□□ -0.46
TPM3-203ENST00000312970 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
TPM3-203ENST00000312970 KIF1BO60333 1816 aa12.19□□□□□ -0.46
TPM3-203ENST00000312970 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
TPM3-203ENST00000312970 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
TPM3-203ENST00000312970 NEXMIFQ5QGS0 1516 aa12.18□□□□□ -0.46
TPM3-203ENST00000312970 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
TPM3-203ENST00000312970 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
TPM3-203ENST00000312970 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
TPM3-203ENST00000312970 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
TPM3-203ENST00000312970 ASXL1Q8IXJ9 1541 aa12.17□□□□□ -0.46
TPM3-203ENST00000312970 NALCNQ8IZF0 1738 aa12.17□□□□□ -0.46
TPM3-203ENST00000312970 AFF2P51816 1311 aa12.15□□□□□ -0.46
TPM3-203ENST00000312970 EP400Q96L91 3159 aa12.15□□□□□ -0.46
TPM3-203ENST00000312970 MST1RQ04912 1400 aa12.15□□□□□ -0.46
TPM3-203ENST00000312970 LRRC59Q96AG4 307 aaKnown RBP12.15□□□□□ -0.46
TPM3-203ENST00000312970 MPHOSPH9Q99550 1183 aa12.15□□□□□ -0.46
TPM3-203ENST00000312970 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
TPM3-203ENST00000312970 ACIN1Q9UKV3 1341 aaKnown RBP12.13□□□□□ -0.47
TPM3-203ENST00000312970 SETD5Q9C0A6 1442 aa12.13□□□□□ -0.47
TPM3-203ENST00000312970 ADGRL3Q9HAR2 1447 aa12.13□□□□□ -0.47
TPM3-203ENST00000312970 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms